Pre_GI Gene

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Host: NC_017186 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017186:2252438 Amycolatopsis mediterranei S699 chromosome, complete genome

Host Lineage: Amycolatopsis mediterranei; Amycolatopsis; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Amycolatopsis belongs to the actinomycete family Pseudonocardiaceae. Amycolatopsis mediterranei produces the antibiotic rifamycin, derivatives of which are used for curing tuberculosis and leprosy. Antibiotic producing bacterium.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22518192252457639nicotinamide mononucleotide transporterQuickGO ontologyBLASTP
225243822540481611lactate transporter LctP family proteinQuickGO ontologyBLASTP
22541782254768591TetR family transcriptional regulatorQuickGO ontologyBLASTP
22548392255594756short-chain dehydrogenaseQuickGO ontologyBLASTP
225559122568021212L-lactate dehydrogenaseQuickGO ontologyBLASTP
225688622596812796pyruvate dehydrogenase subunit E1QuickGO ontologyBLASTP
22600992260530432hypothetical proteinBLASTP
22606042261068465alkyl hydroperoxide reductasethiol specific antioxidantQuickGO ontologyBLASTP
2261109226118375tRNA-ValQuickGO ontology
226114022628551716recombinaseQuickGO ontologyBLASTP
22629152263370456site-specific recombinaseQuickGO ontologyBLASTP
22635532263909357hypothetical proteinBLASTP
226398522650221038adenine-specific DNA-methyltransferaseQuickGO ontologyBLASTP
22650192265834816hypothetical proteinBLASTP
226595922681212163TraGVirD4-like conjugation protein involved in type IV secretionQuickGO ontologyBLASTP
22687692268906138hypothetical protein
22689362269181246hypothetical proteinBLASTP
22691882269982795hypothetical proteinBLASTP
22699792270227249hypothetical proteinBLASTP
22702242270532309hypothetical proteinBLASTP
22706352270856222hypothetical proteinBLASTP
22730082273208201hypothetical protein
22733222273750429hypothetical proteinBLASTP
22737382274514777hypothetical proteinBLASTP
22745922275401810trypsin-like serine proteaseQuickGO ontologyBLASTP
22754832275893411hypothetical protein
22758902276303414hypothetical proteinBLASTP
22763002276719420hypothetical proteinBLASTP
22767202276884165hypothetical protein
227722022786621443XRE family transcriptional regulatorQuickGO ontologyBLASTP
22786722279496825alphabeta hydrolaseQuickGO ontologyBLASTP
22808952281389495CMPdCMP deaminase zinc-binding proteinQuickGO ontologyBLASTP