Pre_GI: BLASTP Hits

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Query: NC_008150:513783:514613 Yersinia pestis Antiqua, complete genome

Start: 514613, End: 514738, Length: 126

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:3448490:348020934802093480334126Yersinia pestis Angola, complete genomehypothetical protein4e-1890.1
NC_010159:3033989:305397130539713054096126Yersinia pestis Angola, complete genomehypothetical protein4e-1890.1
NC_008149:3373229:340392434039243404049126Yersinia pestis Nepal516, complete genometransposase for the IS1541 insertion element4e-1890.1
NC_010159:2252380:227011922701192270628510Yersinia pestis Angola, complete genomeIS1541, transposase4e-1683.6
NC_010159:1668795:167420516742051674714510Yersinia pestis Angola, complete genomeIS1541, transposase4e-1683.6
NC_005810:1130251:113751311375131138022510Yersinia pestis biovar Microtus str. 91001, complete genometransposase for the IS1541 insertion element4e-1683.6
NC_010159:809663:829408829408829917510Yersinia pestis Angola, complete genomeIS1541, transposase4e-1683.6
NC_010159:2440947:244744324474432447952510Yersinia pestis Angola, complete genomeIS1541, transposase4e-1683.6
NC_004088:3382148:338941033894103389919510Yersinia pestis KIM, complete genometransposase4e-1683.6
NC_005810:3333000:334880033488003349309510Yersinia pestis biovar Microtus str. 91001, complete genometransposase for the IS1541 insertion element4e-1683.6
NC_010159:1417993:141799314179931418502510Yersinia pestis Angola, complete genomeIS1541, transposase4e-1683.6
NC_004088:3859173:386516538651653865674510Yersinia pestis KIM, complete genometransposase4e-1683.6
NC_010159:259695:265687265687266196510Yersinia pestis Angola, complete genomeIS1541, transposase4e-1683.6
NC_010159:741819:749624749624750133510Yersinia pestis Angola, complete genomeIS1541, transposase4e-1683.6
NC_017265:3724500:373052537305253731034510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase4e-1683.6
NC_017265:2940539:294648129464812946990510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase4e-1683.6
NC_017265:1136000:114623711462371146746510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase4e-1683.6
NC_017160:1507500:151490515149051515414510Yersinia pestis D182038 chromosome, complete genometransposase4e-1683.6
NC_017154:1225500:123619712361971236706510Yersinia pestis D106004 chromosome, complete genometransposase4e-1683.6
NC_014029:1283500:129410412941041294613510Yersinia pestis Z176003 chromosome, complete genometransposase4e-1683.6
NC_009708:2245586:226898822689882269497510Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeIS1541, transposase4e-1683.6
NC_014029:792719:809113809113809622510Yersinia pestis Z176003 chromosome, complete genometransposase5e-1683.2
NC_014029:792719:808402808402808911510Yersinia pestis Z176003 chromosome, complete genometransposase5e-1683.2
NC_014029:3171627:317805031780503178559510Yersinia pestis Z176003 chromosome, complete genometransposase5e-1683.2
NC_010159:409500:421360421360421869510Yersinia pestis Angola, complete genomeIS1541, transposase5e-1683.2
NC_004088:1510467:151689015168901517399510Yersinia pestis KIM, complete genometransposase5e-1683.2
NC_005810:3021913:303363330336333034142510Yersinia pestis biovar Microtus str. 91001, complete genometransposase for the IS1541 insertion element5e-1683.2
NC_004088:1265730:128356212835621284071510Yersinia pestis KIM, complete genometransposase5e-1683.2
NC_017154:2876545:288787228878722888381510Yersinia pestis D106004 chromosome, complete genometransposase5e-1683.2
NC_017154:734875:750565750565751074510Yersinia pestis D106004 chromosome, complete genometransposase5e-1683.2
NC_017154:734875:751276751276751785510Yersinia pestis D106004 chromosome, complete genometransposase5e-1683.2
NC_017160:2414000:242307424230742423583510Yersinia pestis D182038 chromosome, complete genometransposase5e-1683.2
NC_017160:3094768:310301731030173103526510Yersinia pestis D182038 chromosome, complete genometransposase5e-1683.2
NC_017160:737000:753454753454753963510Yersinia pestis D182038 chromosome, complete genometransposase5e-1683.2
NC_017265:2940539:295312529531252953634510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase5e-1683.2
NC_017265:3375463:337546333754633375972510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase5e-1683.2
NC_017265:3375463:338369433836943384203510Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase5e-1683.2
NC_010159:2546590:256694325669432567131189Yersinia pestis Angola, complete genometransposase for the insertion element5e-1683.2
NC_017160:737000:752743752743753132390Yersinia pestis D182038 chromosome, complete genomeIS1541, transposase7e-1682.4
NC_005810:3142384:314323231432323143342111Yersinia pestis biovar Microtus str. 91001, complete genome8e-1579
NC_016832:1880174:189508018950801895589510Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase for insertion sequence element IS2002e-1477.4
NC_016832:1880174:189186818918681892377510Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase for insertion sequence element IS2002e-1477.4
NC_004431:2444972:246747124674712467980510Escherichia coli CFT073, complete genomeTransposase4e-1476.6
NC_004431:3012668:302638830263883026897510Escherichia coli CFT073, complete genomehypothetical protein4e-1476.6
NC_016832:1182496:118823811882381188747510Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transposase for insertion sequence element IS2007e-1475.9
NC_010159:1071937:107327110732711073783513Yersinia pestis Angola, complete genometransposase8e-1165.9