Pre_GI: BLASTP Hits

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Query: NC_008149:650706:675656 Yersinia pestis Nepal516, complete genome

Start: 675656, End: 676489, Length: 834

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:522731:5476345476345497302097Yersinia pestis Pestoides F chromosome, complete genomeflagellar biosynthesis protein FlhA2e-147521
NC_014029:792719:818338818338819126789Yersinia pestis Z176003 chromosome, complete genomeflagellar biosynthesis/export membrane protein flhA, fhiA2e-140498
NC_009792:2688747:2690640269064026927362097Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-106386
NC_020063:2785652:2785652278565227873941743Enterobacteriaceae bacterium strain FGI 57, complete genomeflagellar biosynthesis pathway, component FlhA8e-90330
NC_008253:257059:2796822796822814211740Escherichia coli 536, complete genomeflagellar biosynthetic protein FlhA6e-89327
NC_007946:258747:2803572803572820961740Escherichia coli UTI89, complete genomeFhiA protein2e-87322
NC_008563:258725:2803362803362820751740Escherichia coli APEC O1, complete genomeFhiA protein2e-87322
NC_011742:258746:2803562803562820951740Escherichia coli S88 chromosome, complete genomeflagellar system protein2e-87322
NC_010515:1618093:1651139165113916532292091Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype III secretion FHIPEP protein1e-70266
NC_010512:866932:8738788738788759682091Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetype III secretion FHIPEP protein2e-70265
NC_009654:3849774:3872818387281838749352118Marinomonas sp. MWYL1, complete genomeflagellar biosynthesis protein FlhA3e-46185
NC_004129:1848701:1866657186665718687862130Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein4e-42171
NC_010501:4080937:4084399408439940865282130Pseudomonas putida W619, complete genomeflagellar biosynthesis protein FlhA1e-41170
NC_009512:1691930:1707400170740017096462247Pseudomonas putida F1, complete genomeflagellar biosynthesis protein FlhA1e-41170
NC_002947:4931476:4934459493445949365882130Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein9e-42170
NC_017986:4374979:4390566439056643926952130Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FlhA9e-42170
NC_007492:1735595:1748724174872417508532130Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein2e-41169
NC_019940:293476:3029843029843050052022Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthesis protein FlhA5e-37154
NC_012559:731859:7504247504247525082085Laribacter hongkongensis HLHK9, complete genomeFlhA3e-36152
NC_013851:3300278:3300278330027833023862109Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthesis protein FlhA2e-33142
NC_017267:2326443:2350404235040423524582055Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeflagellar biosynthesis protein FlhA9e-33140
NC_014328:1135854:1145911114591111479772067Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar biosynthesis protein FlhA4e-30131
NC_009616:1433430:1434548143454814365902043Thermosipho melanesiensis BI429 chromosome, complete genomeflagellar biosynthesis protein FlhA7e-29127
NC_009617:4911595:4911595491159549136612067Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar biosynthesis protein FlhA4e-28125
NC_009012:574145:5974105974105994402031Clostridium thermocellum ATCC 27405, complete genomeflagellar biosynthesis protein FlhA9e-28124
NC_020291:4903981:4922436492243649245022067Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthesis protein FlhA9e-28124
NC_010723:833870:8527348527348548002067Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthesis protein FlhA2e-27123
NC_012440:659646:6802426802426823292088Persephonella marina EX-H1, complete genomeflagellar biosynthesis protein FlhA3e-27122
NC_020409:168916:1830301830301851322103Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeflagellar export pore protein6e-27121
NC_010674:858397:8744368744368765022067Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthesis protein FlhA5e-27121
NC_012962:3030726:3048115304811530501962082Photorhabdus asymbiotica, complete genomeflagellar biosynthesis protein flha4e-27121
NC_010001:3266561:3284172328417232862052034Clostridium phytofermentans ISDg, complete genomeflagellar biosynthesis protein FlhA1e-26120
NC_007759:1356439:1360587136058713626622076Syntrophus aciditrophicus SB, complete genomeflagellar biosynthesis protein2e-26119
NC_021182:2883716:2894323289432328963922070Clostridium pasteurianum BC1, complete genomeflagellar biosynthesis protein FlhA2e-26119
NC_012880:1765920:1804253180425318063492097Dickeya dadantii Ech703, complete genomeflagellar biosynthesis protein FlhA2e-26119
NC_014500:3071764:3075519307551930776062088Dickeya dadantii 3937 chromosome, complete genomeputative flagellar export pore protein2e-26119
NC_013508:1289159:1328657132865713307382082Edwardsiella tarda EIB202, complete genomeflagellar biosynthesis protein6e-26117
NC_017095:166896:1851551851551872152061Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeflagellar biosynthesis protein FlhA2e-25116
NC_016818:1963875:1987797198779719898812085Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeflagellar biosynthesis protein FlhA3e-25115
NC_008346:983816:9868469868469889062061Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagella-associated protein5e-25114
NC_012791:2386000:2406890240689024089772088Variovorax paradoxus S110 chromosome 1, complete genomeflagellar biosynthesis protein FlhA2e-24113
NC_012778:841934:8431098431098451482040Eubacterium eligens ATCC 27750, complete genomeflagellar biosynthesis protein FlhA3e-24112
NC_021184:2238500:2254090225409022561892100Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthesis protein FlhA3e-24112
NC_013223:685628:7095777095777116642088Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthesis protein FlhA1e-23110
NC_014562:1772842:1794461179446117965602100Pantoea vagans C9-1 chromosome, complete genomeFlagellar biosynthesis protein flhA1e-23110
NC_018664:1663324:1665184166518416672172034Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FlhA3e-23109
NC_014652:628435:6528586528586548942037Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthesis protein flha2e-23109
NC_007298:778723:8118018118018138852085Dechloromonas aromatica RCB, complete genomeFlagellar biosynthesis protein FlhA2e-23109
NC_014377:1089894:1090971109097110930012031Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthesis protein FlhA3e-23108
NC_015422:4395388:4411544441154444136342091Alicycliphilus denitrificans K601 chromosome, complete genomeflagellar biosynthesis protein FlhA1e-22107
NC_014910:4026613:4043275404327540453652091Alicycliphilus denitrificans BC chromosome, complete genomeflagellar biosynthesis protein flha1e-22107
NC_015391:2059191:2073208207320820752892082Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FlhA3e-22105
NC_006177:3192500:3208315320831532103662052Symbiobacterium thermophilum IAM 14863, complete genomeflagellar biosynthesis protein4e-22105
NC_010634:2004653:2020936202093620230142079Yersinia pseudotuberculosis PB1/+, complete genomeflagellar biosynthesis protein FlhA4e-22105
NC_015921:272517:2824342824342845242091Borrelia bissettii DN127 chromosome, complete genomeflagellar biosynthesis protein FlhA8e-22104
NC_016894:2931213:2932082293208229341422061Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FlhA8e-22104
NC_008710:277207:2859002859002879902091Borrelia turicatae 91E135, complete genomeflagellar biosynthesis protein FlhA1e-21103
NC_006156:271410:2826482826482847382091Borrelia garinii PBi chromosome linear, complete sequenceflagellar biosynthesis protein1e-21103
NC_001318:270488:2838692838692859622094Borrelia burgdorferi B31, complete genomeflagellar biosynthesis protein2e-21102
NC_011728:269853:2832372832372853272091Borrelia burgdorferi ZS7, complete genomeflagellar biosynthesis protein FlhA2e-21102
NC_008277:272741:2827582827582848482091Borrelia afzelii PKo, complete genomeflagellar biosynthesis protein9e-21100
NC_017238:272980:2829972829972850872091Borrelia afzelii PKo chromosome, complete genomeflagellar biosynthesis protein FlhA9e-21100
NC_010002:661696:6616966616966637952100Delftia acidovorans SPH-1, complete genomeflagellar biosynthesis protein FlhA2e-2099.8
NC_015563:606783:6067836067836088822100Delftia sp. Cs1-4 chromosome, complete genomeflagellar biosynthesis protein FlhA2e-2099.8
NC_015138:4905935:4926457492645749285382082Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar biosynthesis protein FlhA5e-2098.2
NC_020911:2921925:2965710296571029678422133Octadecabacter antarcticus 307, complete genomeflagellar biosynthesis protein FlhA3e-1892.4
NC_004344:26828:4201442014442002187Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein4e-1892
NC_010125:1651687:1666930166693016691792250Gluconacetobacter diazotrophicus PAl 5, complete genomeputative flagellar biosynthesis protein flhA4e-1892
NC_015186:1698000:1703958170395817060332076Acidiphilium multivorum AIU301, complete genomeflagellar biosynthesis protein FlhA3e-1685.9
NC_009484:1627734:1633696163369616357712076Acidiphilium cryptum JF-5 chromosome, complete genomeflagellar biosynthesis protein FlhA3e-1685.9
NC_006677:435652:4446574446574467892133Gluconobacter oxydans 621H, complete genomeflagellar biosynthesis protein5e-1685.1
NC_016893:43234:4323443234453392106Wigglesworthia glossinidia endosymbiont of Glossina morsitansputative flagellar export pore protein7e-1684.7
NC_012808:594000:6155956155956176702076Methylobacterium extorquens AM1, complete genomeFlagellar biosynthesis protein8e-1684.3
NC_011757:748223:7913497913497934902142Methylobacterium chloromethanicum CM4, complete genomeflagellar biosynthesis protein FlhA9e-1684.3
NC_000919:773784:7815137815137836362124Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar biosynthesis protein1e-1584
NC_010741:775000:7829617829617850842124Treponema pallidum subsp. pallidum SS14, complete genomeflagellar biosynthesis protein1e-1584
NC_016842:775368:7830977830977852202124Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein1e-1584
NC_016843:775371:7832847832847854072124Treponema pallidum subsp. pertenue str. Gauthier chromosome,IIISP family Type III (virulence-related) secretory pathway protein1e-1584
NC_016844:775334:7834517834517855742124Treponema pallidum subsp. pallidum DAL-1 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein1e-1584
NC_016848:775822:7835517835517856742124Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein1e-1584
NC_017268:775000:7827637827637848862124Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar biosynthesis protein FlhA1e-1584
NC_021508:775264:7829937829937851162124Treponema pallidum subsp. pallidum SS14, complete genomeIIISP family Type III (virulence-related) secretory pathway protein1e-1584
NC_015714:768500:7763957763957785182124Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeIIISP family Type III (virulence-related) secretory pathway protein1e-1584
NC_015379:2999965:3016048301604830181322085Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative flagellar biosynthesis protein FlhA2e-1583.6
NC_015500:1337180:1358785135878513608602076Treponema brennaborense DSM 12168 chromosome, complete genomeflagellar biosynthesis protein FlhA9e-1580.9
NC_015578:298989:3047233047233067562034Treponema primitia ZAS-2 chromosome, complete genomeflagellar biosynthesis protein FlhA2e-1479.7
NC_012962:1189021:1202740120274012048632124Photorhabdus asymbiotica, complete genometype iii secretory apparatus protein pcrd4e-0962
NC_014012:2565329:2565329256532925673862058Shewanella violacea DSS12, complete genometype III secretion system apparatus protein, HrcV family1e-0860.5
NC_005126:4423964:4429651442965144317682118Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion protein SctV5e-0858.5
NC_008011:663958:6667266667266688282103Lawsonia intracellularis PHE/MN1-00, complete genomeputative type III secretion pore protein1e-0757.4
NC_013722:1689125:1717537171753717196482112Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein2e-0756.6
NC_010067:1507823:1521082152108215230581977Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0756.2
NC_013971:1660144:1679173167917316812422070Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein3e-0755.8
NC_004631:1325817:1348062134806213501072046Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative type III secretion protein3e-0755.8
NC_003198:1621347:1631029163102916330742046Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein3e-0755.8
NC_016832:1324820:1347035134703513490802046Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus protein ssaV3e-0755.8
NC_012214:2221702:2247394224739422494692076Erwinia pyrifoliae Ep1/96, complete genomeType III secretion apparatus3e-0755.8
NC_013961:1622616:1641645164164516437142070Erwinia amylovora, complete genomeType III secretion apparatus InvA3e-0755.8
NC_016831:1236786:1259029125902912610742046Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein4e-0755.5
NC_011274:1763676:1773358177335817754032046Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91secretion system apparatus protein SsaV4e-0755.5
NC_011147:1502096:1511778151177815138232046Salmonella enterica subsp. enterica serovar Paratyphi A strsecretion system apparatus protein SsaV4e-0755.5
NC_006511:1506915:1516597151659715186422046Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCSecretion system apparatus: homology with the LcrD family of proteins4e-0755.5
NC_011094:1435347:1457560145756014596052046Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system apparatus protein SsaV4e-0755.5
NC_006905:1509093:1531344153134415333892046Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaV4e-0755.5
NC_017046:1428272:1450648145064814526241977Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion protein4e-0755.5
NC_012125:2360815:2370497237049723724731977Salmonella enterica subsp. enterica serovar Paratyphi C strainsecretion system apparatus protein SsaV5e-0755.5
NC_010102:1616530:1626212162621216282572046Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0755.5
NC_011083:1476894:1499171149917115012162046Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secretion system apparatus protein SsaV4e-0755.5
NC_016863:1429516:1451823145182314538682046Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion system apparatus protein SsaV4e-0755.5
NC_016860:1469066:1491343149134314933882046Salmonella enterica subsp. enterica serovar Typhimurium strsecretion system apparatus protein SsaV4e-0755.5
NC_016856:1481325:1503632150363215056772046Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion system apparatus protein SsaV4e-0755.5
NC_016810:1428201:1450508145050814525532046Salmonella enterica subsp. enterica serovar Typhimurium strputative type III secretion protein4e-0755.5
NC_011294:1723852:1733534173353417355792046Salmonella enterica subsp. enterica serovar Enteritidis strsecretion system apparatus protein SsaV4e-0755.5
NC_011205:1852665:1862347186234718643922046Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system apparatus protein SsaV4e-0755.5
NC_011080:1470794:1493096149309614951412046Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion system apparatus protein SsaV4e-0755.5
NC_003197:1471349:1493656149365614957012046Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein4e-0755.5
NC_011149:1710601:1720283172028317223282046Salmonella enterica subsp. enterica serovar Agona str. SL483,secretion system apparatus SsaV6e-0755.1
NC_016857:1428201:1450430145043014525532124Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system apparatus protein SsaV5e-0755.1
NC_007624:1046500:1070361107036110717941434Brucella melitensis biovar Abortus 2308 chromosome II, complete2e-0653.1
NC_010740:1051000:1074537107453710762681732Brucella abortus S19 chromosome 2, complete sequence3e-0652.8
NC_010694:2138000:2160056216005621621072052Erwinia tasmaniensis, complete genomeType III secretion apparatus3e-0652.4
NC_014366:2513352:2519768251976825217381971Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein5e-0651.6