Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:1691930 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
169193016931951266flagellar hook-length control proteinQuickGO ontologyBLASTP
16934151693912498flagellar basal body-associated protein FliLQuickGO ontologyBLASTP
16939221694890969flagellar motor switch protein FliMQuickGO ontologyBLASTP
16949381695402465flagellar motor switch protein FliNQuickGO ontologyBLASTP
16954151695849435flagellar biosynthesis protein FliOQuickGO ontologyBLASTP
16958491696604756flagellar biosynthetic protein FliPQuickGO ontologyBLASTP
16966261696895270flagellar biosynthetic protein FliQQuickGO ontologyBLASTP
16969031697679777flagellar biosynthetic protein FliRQuickGO ontologyBLASTP
169768216988241143flagellar biosynthetic protein FlhBQuickGO ontologyBLASTP
16990491699312264Flagellar biosynthesis pathway component FlhA-like proteinQuickGO ontologyBLASTP
16994661700380915D-alanine--D-alanine ligaseQuickGO ontologyBLASTP
170037717015401164aminotransferase class VQuickGO ontologyBLASTP
17015511702429879hypothetical proteinBLASTP
170246317036561194CysMet metabolism pyridoxal-phosphate-dependent enzymeQuickGO ontologyBLASTP
170363117052591629hypothetical proteinBLASTP
170535317064111059D-alanine--D-alanine ligaseQuickGO ontologyBLASTP
17064061707209804transcriptional regulator GntR familyQuickGO ontologyBLASTP
170740017096462247flagellar biosynthesis protein FlhAQuickGO ontologyBLASTP
170965817109651308GTP-binding signal recognition particle SRP54 G- domainQuickGO ontologyBLASTP
17110591711892834Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
17118891712629741RNA polymerase sigma 28 subunit FliAWhiGQuickGO ontologyBLASTP
17127251713111387response regulator receiver proteinQuickGO ontologyBLASTP
17131331713921789chemotaxis phosphatase CheZQuickGO ontologyBLASTP
171393417161772244CheA signal transduction histidine kinaseQuickGO ontologyBLASTP
171622417173361113response regulator receiver modulated CheB methylesteraseQuickGO ontologyBLASTP
17173361718076741MotATolQExbB proton channelQuickGO ontologyBLASTP