Pre_GI Gene

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Host: NC_012808 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012808:594000 Methylobacterium extorquens AM1, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
594281594562282hypothetical proteinBLASTP
594593594823231hypothetical proteinBLASTP
5954865974501965putative chemoreceptor y4sI Methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
597574598224651hypothetical proteinBLASTP
5992986014422145hypothetical proteinBLASTP
60191760201195ribosomal RNA 5SQuickGO ontologyBLASTP
60530760538276tRNA-AlaQuickGO ontologyBLASTP
6074036088241422hypothetical proteinBLASTP
6090436113582316transcriptional accessory proteinQuickGO ontologyBLASTP
611718611999282hypothetical protein
612213612866654ABC-type polysaccharidepolyol phosphate transport system ATPase componentQuickGO ontologyBLASTP
6130146142581245putative Capsule polysaccharide export inner-membrane proteinQuickGO ontologyBLASTP
614267614983717hypothetical proteinBLASTP
615020615328309hypothetical proteinBLASTP
6155956176702076Flagellar biosynthesis proteinQuickGO ontologyBLASTP
6179266196021677putative methyl-accepting chemotaxis receptorsensory transducerQuickGO ontologyBLASTP