Pre_GI: BLASTP Hits

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Query: NC_008010:200796:205845 Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence

Start: 205845, End: 206717, Length: 873

Host Lineage: Deinococcus geothermalis; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This organism was isolated from a hot spring at Agnano, Naples, Italy. Deinococcus geothermalis is a radiation resistant bacterium. This organism has been identified as a primary biofilm former on paper making machinery. The sequence of this organism will provide information on the mechanism and regulation of attachment and biofilm formation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011661:1807101:181101118110111811856846Dictyoglomus turgidum DSM 6724, complete genometranscriptional regulator, RpiR family4e-28125
NC_014377:321949:336280336280337122843Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, RpiR family4e-28125
NC_014410:2329838:234588623458862346728843Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, RpiR family1e-22107
NC_008314:1202963:120453312045331205366834Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator2e-22106
NC_004193:375416:641553641553642401849Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator4e-22105
NC_008358:2574343:257961025796102580443834Hyphomonas neptunium ATCC 15444, complete genometranscriptional regulator, RpiR family3e-22105
NC_009439:4913767:491696849169684917834867Pseudomonas mendocina ymp, complete genomeRpiR family transcriptional regulator6e-22104
NC_021066:601029:611221611221612078858Raoultella ornithinolytica B6, complete genomeDNA-binding transcriptional repressor RpiR2e-21103
NC_009485:1222697:123782312378231238635813Bradyrhizobium sp. BTAi1 chromosome, complete genomeRpiR family transcriptional regulator4e-21102
NC_016511:1212282:121507712150771215949873Propionibacterium acnes TypeIA2 P.acn31 chromosome, completetranscriptional regulator2e-20100
NC_006085:1234587:123938512393851240257873Propionibacterium acnes KPA171202, complete genomeputative transcriptional regulator2e-2099.8
NC_016512:1211653:121444812144481215320873Propionibacterium acnes TypeIA2 P.acn17 chromosome, completetranscriptional regulator2e-2099.8
NC_016516:1203000:120589412058941206766873Propionibacterium acnes TypeIA2 P.acn33 chromosome, completetranscriptional regulator2e-2099.8
NC_014039:1238500:124142412414241242296873Propionibacterium acnes SK137 chromosome, complete genometranscriptional regulator, RpiR family2e-2099.4
NC_009708:1497898:151619215161921517070879Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRpiR family transcriptional regulator3e-2099
NC_020418:1397112:141023714102371411124888Morganella morganii subsp. morganii KT, complete genomeSialic acid utilization regulator, RpiR family8e-2097.8
NC_014219:192555:206560206560207414855Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, RpiR family3e-1892.8
NC_014958:629459:631573631573632421849Deinococcus maricopensis DSM 21211 chromosome, complete genomeRpiR family transcriptional regulator1e-1790.9
NC_014364:394899:436135436135436983849Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, RpiR family3e-1789.4
NC_015152:272500:274117274117274971855Spirochaeta sp. Buddy chromosome, complete genomeRpiR family transcriptional regulator4e-1789
NC_015634:2933712:295589529558952956770876Bacillus coagulans 2-6 chromosome, complete genomeRpiR family transcriptional regulator7e-1788.2
NC_008800:4013298:402615540261554027015861Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,transcriptional regulator7e-1787.8
NC_017511:852260:870245870245871129885Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative RpiR-family transcriptional regulator1e-1687
NC_010067:1782998:179623817962381797119882Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1687
NC_014841:131308:131308131308132201894Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, RpiR family2e-1686.7
NC_006511:1770000:178216817821681783049882Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator2e-1686.7
NC_011147:1763681:177735117773511778232882Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator2e-1686.7
NC_003197:1207597:121527512152751216156882Salmonella typhimurium LT2, complete genomeputative transcriptional regulator5e-1685.1
NC_011094:1166271:117395011739501174831882Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, RpiR family protein5e-1685.1
NC_016810:1163919:117159811715981172479882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator5e-1685.1
NC_016856:1165941:117362011736201174501882Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator5e-1685.1
NC_016860:1205282:121296112129611213842882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator5e-1685.1
NC_016863:1165232:117291111729111173792882Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator5e-1685.1
NC_015224:3892972:390341039034103904270861Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,transcriptional regulator5e-1685.1
NC_016857:1163919:117159811715981172512915Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator5e-1685.1
NC_006905:1186895:119457411945741195455882Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator7e-1684.7
NC_011080:1209935:121761412176141218495882Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, RpiR family7e-1684.7
NC_003198:1117687:112536611253661126247882Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator7e-1684.7
NC_010102:1979742:199189419918941992775882Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1684.7
NC_011083:1216500:122000412200041220885882Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, RpiR family7e-1684.7
NC_004631:1842050:185456618545661855447882Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator7e-1684.7
NC_011205:1186097:119377511937751194656882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853RpiR family transcriptional regulator7e-1684.7
NC_011274:1094379:110205811020581102939882Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator7e-1684.7
NC_017046:1164176:117185511718551172679825Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator7e-1684.7
NC_016832:1838220:185141618514161852297882Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,RpiR-family transcriptional regulator7e-1684.7
NC_016831:1905289:192213519221351923016882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator7e-1684.7
NC_012125:2646792:265912026591202660001882Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator7e-1684.7
NC_011294:1085447:109314410931441094025882Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator7e-1684.7
NC_013515:1125739:113914011391401139958819Streptobacillus moniliformis DSM 12112, complete genometranscriptional regulator, RpiR family2e-1583.2
NC_016901:2542110:254373725437372544591855Shewanella baltica OS678 chromosome, complete genomeRpiR family transcriptional regulator6e-1581.6
NC_020063:2449554:247206824720682472898831Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator6e-1581.6
NC_007510:973828:9935829935829955101929Burkholderia sp. 383 chromosome 1, complete sequenceGlucokinase8e-1581.3
CU928160:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomefused putative DNA-binding transcriptional regulator; putative isomerase7e-1581.3
NC_011741:2715246:272234927223492723197849Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator7e-1581.3
NC_007651:1726472:1749745174974517516701926Burkholderia thailandensis E264 chromosome I, complete sequenceglucokinase/transcriptional regulator, RpiR family, fusion1e-1480.5
NC_012912:2553391:257205325720532572922870Dickeya zeae Ech1591, complete genometranscriptional regulator, RpiR family2e-1480.1
NC_010468:4305105:432097043209704321860891Escherichia coli ATCC 8739, complete genometranscriptional regulator, RpiR family3e-1479.3
NC_010498:4656716:465771046577104658600891Escherichia coli SMS-3-5, complete genomeHTH-type transcriptional regulator RpiR (Als operon repressor)3e-1479.3
NC_000913:4307471:431012443101244311014891Escherichia coli K12, complete genomeDNA-binding transcriptional repressor3e-1479.3
NC_008563:4656000:465876746587674659690924Escherichia coli APEC O1, complete genomeputative transcriptional regulator RpiR3e-1479.3
NC_004431:4867648:487126048712604872183924Escherichia coli CFT073, complete genomeProtein rpiR3e-1479.3
NC_013353:5022196:502319050231905024080891Escherichia coli O103:H2 str. 12009, complete genometranscriptional repressor3e-1479.3
AP010958:5022196:502319050231905024080891Escherichia coli O103:H2 str. 12009 DNA, complete genometranscriptional repressor3e-1479.3
NC_010473:4409492:441048644104864411376891Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional repressor3e-1479.3
CP002516:4431235:444760744476074448497891Escherichia coli KO11, complete genometranscriptional regulator, RpiR family3e-1479.3
AC_000091:4313167:431677943167794317669891Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional repressor3e-1479.3
NC_016902:4431235:444760744476074448497891Escherichia coli KO11FL chromosome, complete genomeRpiR family transcriptional regulator3e-1479.3
NC_012967:4289929:429092342909234291813891Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-1479.3
NC_012759:4247865:424885942488594249749891Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-1479.3
NC_011742:4569683:457329545732954574185891Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-1479.3
NC_011415:4582388:458338245833824584272891Escherichia coli SE11 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-1479.3
NC_011750:4719477:472047147204714721361891Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional repressor RpiR3e-1479.3
NC_008253:4541915:454482645448264545716891Escherichia coli 536, complete genomeprotein RpiR3e-1479.3
NC_012947:4106031:412229541222954123185891Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeDNA-binding transcriptional repressor RpiR4e-1479
NC_003909:927955:935762935762936625864Bacillus cereus ATCC 10987, complete genometranscriptional regulator, RpiR family, putative7e-1478.2
NC_014334:99000:117879117879118748870Lactobacillus casei str. Zhang chromosome, complete genometranscriptional regulator2e-1377
NC_013421:2306000:230610423061042307030927Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, RpiR family2e-1376.6
CU928160:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator2e-1376.6
NC_011741:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator HexR2e-1376.6
NC_013361:2591829:259568825956882596557870Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator HexR2e-1376.6
NC_013364:2355298:235915723591572360026870Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator2e-1376.6
NC_010658:1933605:193746419374641938333870Shigella boydii CDC 3083-94, complete genometranscriptional regulator, rpiR family3e-1376.3
NC_016822:1339058:135362613536261354495870Shigella sonnei 53G, complete genomeDNA-binding transcriptional regulator HexR3e-1375.9
NC_007645:713930:730736730736731593858Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator5e-1375.1
NC_007384:1355060:137077813707781371647870Shigella sonnei Ss046, complete genomehypothetical protein1e-1274.3
NC_012691:2146473:215826621582662159144879Tolumonas auensis DSM 9187, complete genometranscriptional regulator, RpiR family2e-1273.2
NC_006905:3717306:372665337266533727534882Salmonella enterica subsp. enterica serovar Choleraesuis strProtein rpiR5e-1272
NC_015389:809474:815699815699816547849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family9e-1271.2
NC_013171:1677543:168050016805001681339840Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family3e-1169.3
NC_013855:1268424:128469812846981285603906Azospirillum sp. B510 plasmid pAB510a, complete sequenceDNA-binding transcriptional regulator2e-1067
NC_009457:1444449:147833414783341479170837Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-1066.6
NC_012578:1838470:187236418723641873200837Vibrio cholerae M66-2 chromosome I, complete sequencePutative HTH-type transcriptional regulator ybbH2e-1066.6
NC_016445:1363831:139663113966311397446816Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completesialic acid utilization regulator RpiR family2e-1066.6
NC_012668:1688500:172144717214471722277831Vibrio cholerae MJ-1236 chromosome 1, complete sequencesialic acid utilization regulator RpiR family2e-1066.6
NC_017270:1755552:176398117639811764817837Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid utilization regulator, RpiR family2e-1066.2
NC_003210:2879906:288124328812432882049807Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-1065.5
NC_007929:1463295:149820914982091499045837Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, RpiR family7e-1064.7
NC_015389:616430:643533643533644402870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family1e-0963.9
NC_004668:3156247:316345631634563164313858Enterococcus faecalis V583, complete genomephosphosugar-binding transcriptional regulator, putative2e-0963.2
NC_009785:130252:132523132523133377855Streptococcus gordonii str. Challis substr. CH1, complete genomephosphosugar-binding transcriptional regulator, RpiR family1e-0860.8
NC_016602:2292518:231509123150912315954864Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetranscriptional regulator4e-0858.9
NC_013895:605488:606998606998607921924Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscriptional regulator, RpiR family2e-0756.6
NC_014206:3391352:339784933978493398616768Geobacillus sp. C56-T3 chromosome, complete genomeRpiR family transcriptional regulator2e-0756.2
NC_008525:1013979:103232610323261033168843Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator4e-0755.5
NC_016630:1385719:139135113913511392217867Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator2e-0653.5
NC_014657:1193985:119567511956751196538864Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, rpir family3e-0652.8