Pre_GI: BLASTP Hits

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Query: NC_007613:4403070:4422066 Shigella boydii Sb227, complete genome

Start: 4422066, End: 4422569, Length: 504

Host Lineage: Shigella boydii; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic that took place in China in the 1950s. Causes dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella boydii is uncommon except in India, where it was first isolated. Progression to clinical dysentery occurs in most patients infected with this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:5123325:514301551430155143518504Escherichia coli CFT073, complete genomeFimG protein precursor2e-82303
NC_002695:5381576:540317654031765403679504Escherichia coli O157:H7 str. Sakai, complete genomeFimG1e-81301
CP002185:4791811:481072648107264811229504Escherichia coli W, complete genomeputative fimbrial subunit protein1e-81301
CP002516:4199133:420164142016414202144504Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein1e-81301
NC_011353:5455224:547682454768245477327504Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein fimG1e-81301
NC_013008:5411285:543288554328855433388504Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeminor subunit of type 1 fimbriae1e-81301
NC_013361:5580741:559680055968005597303504Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor component FimG of type 1 fimbriae1e-81301
NC_013941:5219841:524145752414575241960504Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeFimG1e-81301
NC_016902:4199133:420164142016414202144504Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein1e-81301
NC_008253:4817864:485352248535224854025504Escherichia coli 536, complete genomeFimG protein precursor1e-81301
NC_007946:4875997:491303249130324913535504Escherichia coli UTI89, complete genometype 1 fimbriae minor subunit precursor FimG4e-81300
NC_016822:4889656:491030649103064910809504Shigella sonnei 53G, complete genomeminor component of type 1 fimbriae3e-81300
NC_011741:4570498:460892746089274609430504Escherichia coli IAI1 chromosome, complete genomeminor component of type 1 fimbriae4e-81299
CU928160:4570498:460892746089274609430504Escherichia coli IAI1 chromosome, complete genomeminor component of type 1 fimbriae4e-81299
CP002797:4656327:467625046762504676753504Escherichia coli NA114, complete genomeFimbrial protein FimG4e-81299
NC_010498:4930649:495290849529084953411504Escherichia coli SMS-3-5, complete genomeprotein fimG6e-81299
NC_011750:4978000:499573849957384996241504Escherichia coli IAI39 chromosome, complete genomeminor component of type 1 fimbriae1e-80298
NC_004741:4364235:436675143667514367254504Shigella flexneri 2a str. 2457T, complete genomeminor fimbrial subunit, precursor polypeptide2e-80297
NC_008258:4345400:434632243463224346825504Shigella flexneri 5 str. 8401, complete genomefimbrial morphology2e-80297
AC_000091:4534935:455296545529654553468504Escherichia coli W3110 DNA, complete genomeminor component of type 1 fimbriae2e-80297
NC_000913:4528278:454630845463084546811504Escherichia coli K12, complete genomeminor component of type 1 fimbriae2e-80297
NC_004337:4374500:437565543756554376158504Shigella flexneri 2a str. 301, complete genomeminor fimbrial subunit, precursor polypeptide2e-80297
NC_012759:4467288:448479344847934485296504Escherichia coli BW2952 chromosome, complete genomeminor component of type 1 fimbriae2e-80297
NC_012947:3883484:388440638844063884909504Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein2e-80297
NC_012967:4510393:452919945291994529702504Escherichia coli B str. REL606 chromosome, complete genomeminor component of type 1 fimbriae2e-80297
NC_013364:5255700:527974652797465280249504Escherichia coli O111:H- str. 11128, complete genomeminor component FimG of type 1 fimbriae2e-80297
NC_011751:5070597:508764450876445088147504Escherichia coli UMN026 chromosome, complete genomeminor component of type 1 fimbriae3e-80296
NC_011742:4873351:489110848911084891611504Escherichia coli S88 chromosome, complete genomeminor component of type 1 fimbriae5e-80296
NC_009801:4882684:490530449053044905807504Escherichia coli E24377A, complete genomeprotein fimG5e-80296
NC_011283:819970:819970819970820470501Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein FimG2e-62238
NC_010694:3178842:319025431902543190757504Erwinia tasmaniensis, complete genomeMinor fimbrial subunit, FimG5e-55213
NC_009801:1678790:169762916976291698132504Escherichia coli E24377A, complete genomeprotein fimG homolog1e-46185
NC_011748:1684777:170016317001631700666504Escherichia coli 55989, complete genomeputative fimbrial-like adhesin exported protein1e-46185
CU928145:1684777:170016317001631700666504Escherichia coli 55989 chromosome, complete genomeputative fimbrial-like adhesin exported protein1e-46185
NC_011415:1669484:168487016848701685373504Escherichia coli SE11 chromosome, complete genomeputative fimbrial protein1e-46185
CU928160:1579375:159476215947621595265504Escherichia coli IAI1 chromosome, complete genomeputative fimbrial-like adhesin exported protein1e-46185
CP002516:2395578:240863124086312409134504Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein1e-46185
NC_011751:1770376:178576217857621786265504Escherichia coli UMN026 chromosome, complete genomeputative fimbrial-like adhesin exported protein1e-46185
CP002185:1681327:169671416967141697217504Escherichia coli W, complete genomepredicted fimbrial-like adhesin protein1e-46185
NC_011741:1579375:159476215947621595265504Escherichia coli IAI1 chromosome, complete genomeputative fimbrial-like adhesin exported protein1e-46185
NC_016902:2395578:240863124086312409134504Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein1e-46185
NC_004431:1754627:177347217734721773975504Escherichia coli CFT073, complete genomeHypothetical fimbrial-like protein ydeR precursor2e-46184
NC_011601:1675000:169044416904441690947504Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomefimbrial protein-like protein2e-46184
NC_010468:2345781:235557023555702356073504Escherichia coli ATCC 8739, complete genomeFimbrial protein3e-46183
NC_013008:2007228:202261620226162023119504Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeF9 fimbriae protein4e-46183
NC_002655:1966464:197893019789301979433504Escherichia coli O157:H7 EDL933, complete genomeputative fimbrial-like protein4e-46183
NC_002695:2091890:210903921090392109542504Escherichia coli O157:H7 str. Sakai, complete genomeputative fimbrial-like protein4e-46183
NC_013941:1894496:191333719133371913840504Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-46183
CP002797:1591000:159831715983171598820504Escherichia coli NA114, complete genomePutative fimbrial protein5e-46183
NC_000913:1570431:158581715858171586320504Escherichia coli K12, complete genomepredicted fimbrial-like adhesin protein3e-46183
AC_000091:1574000:158950715895071590010504Escherichia coli W3110 DNA, complete genomepredicted fimbrial-like adhesin protein3e-46183
NC_013364:1902761:192160019216001922103504Escherichia coli O111:H- str. 11128, complete genomeputative fimbrial-like adhesin protein3e-46183
NC_013361:2047170:206600520660052066508504Escherichia coli O26:H11 str. 11368 chromosome, complete genomefimbrial-like adhesin protein3e-46183
NC_012967:1546000:156174415617441562247504Escherichia coli B str. REL606 chromosome, complete genomeputative fimbrial-like adhesin protein3e-46183
NC_012947:2228235:223860622386062239109504Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein3e-46183
NC_012759:1462490:147787614778761478379504Escherichia coli BW2952 chromosome, complete genomeputative fimbrial-like adhesin protein3e-46183
NC_010473:1661000:167641216764121676915504Escherichia coli str. K-12 substr. DH10B, complete genomepredicted fimbrial-like adhesin protein3e-46183
NC_009800:1589000:160461616046161605119504Escherichia coli HS, complete genomeprotein fimG homolog1e-45182
NC_008563:1620943:163633516363351636838504Escherichia coli APEC O1, complete genomepredicted fimbrial-like adhesin protein2e-45181
NC_010498:1659328:166250016625001663147648Escherichia coli SMS-3-5, complete genomeprotein FimG-like protein6e-43172
NC_011353:2004800:202364020236402023930291Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeFimG-like protein5e-27120
AP010958:1711656:173049717304971730751255Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-22103
NC_013353:1711656:173049717304971730751255Escherichia coli O103:H2 str. 12009, complete genome4e-22103
NC_004431:1166568:119336311933631193866504Escherichia coli CFT073, complete genomeF1C minor fimbrial subunit protein G presursor7e-22102
NC_009778:1902995:190775519077551908267513Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-21102
NC_009436:1141376:117005011700501170601552Enterobacter sp. 638, complete genomefimbrial protein5e-2097.1
NC_009778:1902995:190830219083021908823522Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-2096.7
NC_015567:1206727:122135812213581221843486Serratia sp. AS9 chromosome, complete genomeFimbrial protein domain-containing protein3e-1994.4
NC_015566:1206500:122117312211731221658486Serratia sp. AS12 chromosome, complete genomeFimbrial protein domain-containing protein3e-1994.4
NC_009778:1902995:190893719089371909467531Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-1993.2
NC_008253:296500:316433316433316924492Escherichia coli 536, complete genomeF1C minor fimbrial subunit protein G presursor8e-1889.7
NC_013850:2685835:269785926978592698371513Klebsiella variicola At-22 chromosome, complete genomeFimbrial protein1e-1479
NC_011283:2684046:269306326930632693569507Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein1e-1479
NC_020064:3790472:380234738023473802880534Serratia marcescens FGI94, complete genomeP pilus assembly protein, pilin FimA2e-1478.6
NC_013716:1918664:193201819320181932533516Citrobacter rodentium ICC168, complete genomeputative fimbrial subunit2e-1272
NC_011274:25692:298832988330401519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial subunit3e-0754.7
NC_011149:25760:299962999630514519Salmonella enterica subsp. enterica serovar Agona str. SL483,fimbrial subunit3e-0754.7
NC_011080:25751:299872998730505519Salmonella enterica subsp. enterica serovar Newport str. SL254,fimbrial subunit3e-0754.7
NC_010102:25893:300843008430602519Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0754.7
NC_003197:25803:299942999430512519Salmonella typhimurium LT2, complete genomefimbrial subunit3e-0754.7
NC_011205:25805:299962999630514519Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial subunit3e-0754.7
NC_011294:25569:297602976030278519Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial subunit3e-0754.7
NC_016810:25803:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium strfimbrial subunit3e-0754.7
NC_016831:25760:299962999630514519Salmonella enterica subsp. enterica serovar Gallinarum/pullorumfimbrial subunit3e-0754.7
NC_016856:25803:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfimbrial subunit3e-0754.7
NC_016857:25803:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74fimbrial subunit3e-0754.7
NC_016860:25758:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium strfimbrial subunit3e-0754.7
NC_016863:25804:299952999530513519Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fimbrial subunit3e-0754.7
NC_017046:25758:299942999430512519Salmonella enterica subsp. enterica serovar Typhimurium str. 798fimbrial subunit3e-0754.7
NC_021066:4906239:490951849095184910102585Raoultella ornithinolytica B6, complete genomeFimbrin-like protein fimI precursor1e-0652.4
NC_011094:25762:299982999830516519Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial protein2e-0652
NC_016832:25807:299982999830516519Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Fimbrial subunit2e-0652
NC_004631:25807:299982999830516519Salmonella enterica subsp. enterica serovar Typhi Ty2, completefimbrial subunit2e-0652
NC_003198:25807:299982999830516519Salmonella enterica subsp. enterica serovar Typhi str. CT18,fimbrial subunit2e-0652
NC_013716:357928:402955402955403491537Citrobacter rodentium ICC168, complete genomeputative major fimbrial subunit2e-0652
NC_020181:3585898:359677535967753597335561Enterobacter aerogenes EA1509E, complete genomePutative fimbrial subunit3e-0651.2
NC_006511:25796:299872998730505519Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-0650.8