Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:5219841 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
521984152261826342DEADDEAH box helicaseQuickGO ontologyBLASTP
522617952282932115ATP-dependent DNA helicase UvrDREP familyQuickGO ontologyBLASTP
52297875230767981hypothetical proteinBLASTP
523083252320461215N-acetylneuraminate-epimerase precursorQuickGO ontologyBLASTP
52319585232683726hypothetical proteinBLASTP
52341305234732603type 1 fimbriae regulatory protein fimBQuickGO ontologyBLASTP
52352105235806597type 1 fimbriae regulatory protein FimEQuickGO ontologyBLASTP
52362875236835549major type 1 subunit fimbrinQuickGO ontologyBLASTP
52367925237439648FimI fimbrial proteinQuickGO ontologyBLASTP
52374765238201726chaperone protein FimCQuickGO ontologyBLASTP
523826852409042637Export and assembly outer membrane protein of type 1 fimbriaeQuickGO ontologyBLASTP
52409145241444531Fimbrial protein FimFQuickGO ontologyBLASTP
52414575241960504FimGQuickGO ontologyBLASTP
52419805242882903adhesinQuickGO ontologyBLASTP
524305652443991344High-affinity gluconate transporterQuickGO ontologyBLASTP