Pre_GI Gene

Some Help

Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:4930649 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
493064949369906342DEADDEAH box helicase domain-containing proteinQuickGO ontologyBLASTP
493698749391012115ATP-dependent DNA helicase UvrDQuickGO ontologyBLASTP
49396154940265651hypothetical protein
49410364941221186hypothetical proteinBLASTP
49412394942219981hypothetical proteinBLASTP
494228449433901107kelch repeat-containing proteinQuickGO ontologyBLASTP
49434104944126717N-acetylneuraminic acid porin NanCQuickGO ontologyBLASTP
49447674944928162hypothetical proteinBLASTP
49455814946183603type 1 fimbriae regulatory protein FimBQuickGO ontologyBLASTP
49466614947257597type 1 fimbriae regulatory protein FimEQuickGO ontologyBLASTP
49477384948286549type-1 fimbrial proteinQuickGO ontologyBLASTP
49483934948890498type-1 fimbrial proteinQuickGO ontologyBLASTP
49488844949003120hypothetical protein
49490024949652651chaperone protein FimCQuickGO ontologyBLASTP
494978549523552571outer membrane usher protein fimDQuickGO ontologyBLASTP
49523654952895531fimbrial protein FimFQuickGO ontologyBLASTP
49529084953411504protein fimGQuickGO ontologyBLASTP
49534314954333903protein FimHQuickGO ontologyBLASTP
495457649559191344high-affinity gluconate transporter GntPQuickGO ontologyBLASTP