Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:1918664 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19186641919287624outer-membrane lipoproteinQuickGO ontologyBLASTP
191928419201358524-diphosphocytidyl-2-C-methyl-D-erythritol kinaseQuickGO ontologyBLASTP
19204011921348948ribose-phosphate pyrophosphokinaseQuickGO ontologyBLASTP
192173419234161683putative sulphate transporterQuickGO ontologyBLASTP
19234721923750279putative outer membrane proteinQuickGO ontologyBLASTP
19240261924610585Peptidyl-tRNA hydrolaseQuickGO ontologyBLASTP
192472719258181092GTP-dependent nucleic acid-binding proteinQuickGO ontologyBLASTP
192590919284792571hypothetical proteinBLASTP
192848219310372556hypothetical proteinBLASTP
19313501931997648putative LuxR-family transcriptional regulatorQuickGO ontologyBLASTP
19320181932533516putative fimbrial subunitQuickGO ontologyBLASTP
19325461933487942putative fimbrial adhesinQuickGO ontologyBLASTP
193351919359662448putative fimbrial usher proteinQuickGO ontologyBLASTP
19360571936734678putative fimbrial chaperone proteinQuickGO ontologyBLASTP
19367841937314531putative major fimbrial subunitQuickGO ontologyBLASTP
19376691938331663hypothetical proteinBLASTP
19383861939018633hypothetical proteinBLASTP
193934019410461707periplasmic trehalaseQuickGO ontologyBLASTP
194109519432092115putative TonB-dependent outer membrane siderophore receptor proteinQuickGO ontologyBLASTP