Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:4873351 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
48730764873354279enzyme IIB component of PTS KpLE2 phage-like elementQuickGO ontologyBLASTP
487335148744721122endoglucanase with Zn-dependent exopeptidase domain KpLE2 phage-like elementQuickGO ontologyBLASTP
48752584876004747methyltransferase KpLE2 phage-like elementQuickGO ontologyBLASTP
48760604876605546acetyltransferase KpLE2 phage-like elementQuickGO ontologyBLASTP
48766174876874258hypothetical proteinBLASTP
48773654877496132hypothetical proteinBLASTP
487783648788521017frameshift suppressor KpLE2 phage-like elementQuickGO ontologyBLASTP
48794354880415981hypothetical proteinBLASTP
488048048815861107N-acetylneuraminic acid mutarotaseQuickGO ontologyBLASTP
48816064882322717N-acetylnuraminic acid outer membrane channel proteinQuickGO ontologyBLASTP
48831214883516396hypothetical proteinBLASTP
48837764884378603tyrosine recombinaseQuickGO ontologyBLASTP
48848554885451597tyrosine recombinaseQuickGO ontologyBLASTP
48859324886486555major type 1 subunit fimbrin pilinQuickGO ontologyBLASTP
48865514887090540type 1 pilus biosynthesis fimbrial proteinQuickGO ontologyBLASTP
48871274887852726chaperone periplasmicQuickGO ontologyBLASTP
488791948905552637outer membrane usher protein type 1 fimbrial synthesisQuickGO ontologyBLASTP
48905654891095531minor component of type 1 fimbriaeQuickGO ontologyBLASTP
48911084891611504minor component of type 1 fimbriaeQuickGO ontologyBLASTP
48916314892533903minor component of type 1 fimbriaeQuickGO ontologyBLASTP
489270648940491344fructuronate transporterQuickGO ontologyBLASTP
489438948955731185mannonate dehydrataseQuickGO ontologyBLASTP