Pre_GI: BLASTP Hits

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Query: NC_007347:1215358:1217181 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 1217181, End: 1218635, Length: 1455

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004757:1089057:1109547110954711109231377Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein2e-54213
NC_020211:4168189:4189337418933741906681332Serratia marcescens WW4, complete genometRNA(Ile)-lysidine synthetase5e-38159
NC_016745:2785346:2812901281290128142321332Oceanimonas sp. GK1 chromosome, complete genometRNA(Ile)-lysidine synthetase8e-37155
NC_012880:3421500:3451366345136634527121347Dickeya dadantii Ech703, complete genometRNA(Ile)-lysidine synthetase2e-29130
NC_004547:1174650:1174650117465011759721323Erwinia carotovora subsp. atroseptica SCRI1043, complete genomecell cycle protein3e-29130
NC_016513:1400899:1402383140238314037291347Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA mismatch repair protein1e-28127
NC_015138:3160764:3176205317620531772541050Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetRNA(Ile)-lysidine synthetase9e-28125
NC_013416:1091432:1094201109420110955471347Aggregatibacter actinomycetemcomitans D11S-1, complete genometRNA(Ile)-lysidine synthase2e-27124
NC_014109:326500:3411323411323424961365Candidatus Riesia pediculicola USDA chromosome, complete genometRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase)3e-27123
NC_004545:96422:1153061153061166221317Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative cell cycle protein MesJ6e-27122
NC_016641:1639356:1657391165739116588391449Paenibacillus terrae HPL-003 chromosome, complete genometRNA(Ile)-lysidine synthase5e-26119
NC_007954:1823085:1826662182666218280921431Shewanella denitrificans OS217, complete genometRNA(Ile)-lysidine synthetase-like protein4e-25116
NC_014483:39729:5869858698601461449Paenibacillus polymyxa E681 chromosome, complete genometRNA(Ile)-lysidine synthase2e-24114
NC_018704:81733:8173381733831361404Amphibacillus xylanus NBRC 15112, complete genometRNA(Ile)-lysidine synthase7e-21102
NC_015425:163000:1656221656221670251404Clostridium botulinum BKT015925 chromosome, complete genomecell cycle protein MesJ1e-20101
NC_004557:162670:1626701626701640731404Clostridium tetani E88, complete genomecell cycle protein mesJ3e-20100
NC_014758:1489761:1510126151012615113881263Calditerrivibrio nitroreducens DSM 19672 chromosome, completetRNA(ile)-lysidine synthetase5e-2099.4
NC_008593:153014:1555461555461569401395Clostridium novyi NT, complete genomeCell cycle protein MesJ, putative1e-1998.2
NC_014153:436082:4554634554634565151053Thiomonas intermedia K12 chromosome, complete genometRNA(Ile)-lysidine synthetase3e-1997.1
NC_013316:4018451:4040068404006840414561389Clostridium difficile R20291, complete genomeputative ATPase7e-1995.9
NC_009089:4140764:4161747416174741631351389Clostridium difficile 630, complete genomeputative ATPase7e-1995.9
NC_009012:2661795:2683143268314326845551413Clostridium thermocellum ATCC 27405, complete genometRNA(Ile)-lysidine synthetase1e-1895.1
NC_008262:2649289:2693810269381026952191410Clostridium perfringens SM101, complete genometRNA(Ile)-lysidine synthetase1e-1894.7
NC_017208:64500:6731767317686091293Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecell cycle protein MesJ2e-1894.4
NC_017316:203233:2048042048042062971494Enterococcus faecalis OG1RF chromosome, complete genometRNA(Ile)-lysidine synthase3e-1893.6
NC_009495:3735703:3769960376996037713661407Clostridium botulinum A str. ATCC 3502 chromosome, complete genometRNA(Ile)-lysidine synthetase7e-1892.4
NC_009698:3609881:3643059364305936444651407Clostridium botulinum A str. Hall chromosome, complete genometRNA(Ile)-lysidine synthetase7e-1892.4
NC_009699:3839575:3872747387274738741531407Clostridium botulinum F str. Langeland chromosome, complete genometRNA(Ile)-lysidine synthetase9e-1892
NC_015275:3680323:3680323368032336816961374Clostridium lentocellum DSM 5427 chromosome, complete genometRNA(Ile)-lysidine synthetase2e-1790.9
NC_015978:412856:4141134141134154981386Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein4e-1790.1
NC_007498:1148249:1168260116826011696361377Pelobacter carbinolicus DSM 2380, complete genomecell cycle protein6e-1789.4
NC_009883:1492425:1500037150003715013291293Rickettsia bellii OSU 85-389, complete genometRNA(Ile)-lysidine synthetase1e-1688.2
NC_007940:1485006:1492614149261414939061293Rickettsia bellii RML369-C, complete genometRNA(Ile)-lysidine synthetase1e-1688.2
NC_016605:272231:2738212738212751731353Pediococcus claussenii ATCC BAA-344 chromosome, complete genometRNA(Ile)-lysidine synthetase2e-1687
NC_013939:1023443:1026346102634610276051260Deferribacter desulfuricans SSM1, complete genomecell cycle protein MesJ9e-1685.1
NC_014328:4471995:4497934449793444993401407Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative tRNA(Ile)-lysidine synthase1e-1584.7
NC_008710:819389:8323068323068336251320Borrelia turicatae 91E135, complete genometRNA(Ile)-lysidine synthetase TilS1e-1481.6
NC_007576:1564739:1584015158401515854091395Lactobacillus sakei subsp. sakei 23K, complete genomePutative ATPase of the PP-loop superfamily, cell cycle protein6e-1479.3
NC_010723:173280:1812001812001826061407Clostridium botulinum E3 str. Alaska E43, complete genometRNA(Ile)-lysidine synthase7e-1479.3
NC_018664:2459994:2484668248466824860501383Clostridium acidurici 9a chromosome, complete genometRNA(Ile)-lysidine synthase7e-1479
NC_017285:913000:930916930916931875960Chlamydophila pneumoniae LPCoLN chromosome, complete genometRNA(Ile)-lysidine synthetase1e-1378.6
NC_013037:6281164:6286374628637462877081335Dyadobacter fermentans DSM 18053, complete genometRNA(Ile)-lysidine synthetase2e-1377.4
NC_014150:2055907:2077601207760120789531353Brachyspira murdochii DSM 12563 chromosome, complete genometRNA(Ile)-lysidine synthetase2e-1377.4
NC_008497:556365:5563655563655577171353Lactobacillus brevis ATCC 367, complete genometRNA(Ile)-lysidine synthetase, MesJ3e-1377
NC_009513:303043:3030433030433044371395Lactobacillus reuteri F275, complete genometRNA(Ile)-lysidine synthetase4e-1376.6
NC_007929:1397989:1418710141871014200681359Lactobacillus salivarius subsp. salivarius UCC118, complete genometRNA(Ile)-lysidine synthase TilS2e-1274.7
NC_019960:801589:8015898015898029321344Prevotella dentalis DSM 3688 chromosome 1, complete sequencetRNA(Ile)-lysidine synthetase2e-1273.9
NC_012121:139741:1624001624001636801281Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative PP-loop family protein4e-1273.6
NC_008787:1345988:136834513683451369310966Campylobacter jejuni subsp. jejuni 81-176, complete genometRNA(Ile)-lysidine synthetase1e-1172
NC_020291:117983:1330981330981345041407Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometRNA(Ile)-lysidine synthase TilS3e-1170.5
NC_013928:9494:1085510855121261272Streptococcus mutans NN2025, complete genomecell-cycle protein5e-1169.7
NC_014935:1999653:2030660203066020316941035Nitratifractor saLSUginis DSM 16511 chromosome, complete genometRNA(ile)-lysidine synthetase5e-1169.3
NC_003869:2267627:2283780228378022851831404Thermoanaerobacter tengcongensis MB4, complete genomepredicted ATPase of the PP-loop superfamily implicated in cell cycle control6e-1169.3
NC_014761:1196669:1212383121238312139511569Oceanithermus profundus DSM 14977 chromosome, complete genometRNA(ile)-lysidine synthetase8e-1168.9
NC_020054:4795000:4814976481497648163371362Fibrella aestuarina BUZ 2 drat genometRNA(Ile)-lysidine synthase2e-1067.8
NC_015958:2361551:2377798237779823791741377Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genometRNA(Ile)-lysidine synthase2e-1067.4
NC_011565:1:5397539767401344Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,tRNA(Ile)-lysidine synthase8e-1065.5
NC_008525:1493317:1514730151473015161001371Pediococcus pentosaceus ATCC 25745, complete genometRNA(Ile)-lysidine synthetase, MesJ1e-0965.1
NC_010320:819326:8235828235828249581377Thermoanaerobacter sp. X514 chromosome, complete genometRNA(Ile)-lysidine synthetase1e-0965.1
NC_015703:4933430:4986515498651549878341320Runella slithyformis DSM 19594 chromosome, complete genometRNA(Ile)-lysidine synthase1e-0862
NC_014039:334892:338052338052339005954Propionibacterium acnes SK137 chromosome, complete genometRNA(Ile)-lysidine synthetase2e-0860.8
NC_006085:308567:311745311745312680936Propionibacterium acnes KPA171202, complete genomehypothetical protein2e-0860.8
NC_016511:308244:311422311422312357936Propionibacterium acnes TypeIA2 P.acn31 chromosome, completehypothetical protein2e-0860.8
NC_016512:305240:310786310786311721936Propionibacterium acnes TypeIA2 P.acn17 chromosome, completehypothetical protein2e-0860.8
NC_016516:300846:302219302219303154936Propionibacterium acnes TypeIA2 P.acn33 chromosome, completehypothetical protein2e-0860.8
NC_006449:5046:1078810788120531266Streptococcus thermophilus CNRZ1066, complete genomeputative cell-cycle protein, MesJ/Ycf62 family3e-0860.5
NC_006448:5046:1078810788120531266Streptococcus thermophilus LMG 18311, complete genomeputative cell-cycle protein, MesJ/Ycf62 family3e-0860.5
NC_007604:1145373:1161580116158011625901011Synechococcus elongatus PCC 7942, complete genomeconserved hypothetical protein YCF625e-0859.7
NC_015760:8914:1070510705119701266Streptococcus salivarius CCHSS3, complete genometRNA(Ile)-lysidine synthase1e-0758.5
NC_015186:491930:5211735211735223421170Acidiphilium multivorum AIU301, complete genometRNA(Ile)-lysidine synthetase3e-0757.4