Pre_GI: BLASTP Hits

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Query: NC_005126:3812054:3855809 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3855809, End: 3857536, Length: 1728

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:3568046:3595517359551735972681752Photorhabdus asymbiotica, complete genomesimilar to putative membrane protein0692
NC_009708:915814:9371139371139388341722Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeOmpA domain-containing protein6e-99362
NC_010465:893921:9109249109249126601737Yersinia pseudotuberculosis YPIII, complete genomeOmpA/MotB domain protein9e-98358
NC_010159:172469:1822351822351839711737Yersinia pestis Angola, complete genome5e-98358
NC_010159:3120642:3140106314010631418421737Yersinia pestis Angola, complete genome5e-98358
NC_009708:2788855:2839036283903628407721737Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeOmpA domain-containing protein5e-98358
NC_009708:874770:8917838917838935191737Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeOmpA domain-containing protein1e-97357
NC_003143:1630000:1660534166053416622701737Yersinia pestis CO92, complete genomehypothetical protein1e-97357
NC_008150:844727:8743988743988761341737Yersinia pestis Antiqua, complete genomehypothetical protein1e-97357
NC_005810:1467772:1489439148943914911751737Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-97357
NC_006155:1756000:1779932177993217816681737Yersinia pseudotuberculosis IP 32953, complete genomeOmpA family of outer membrane porins1e-97357
NC_009381:1682000:1702695170269517044311737Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-97357
NC_014029:1702338:1730044173004417317801737Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-97357
NC_017160:905783:9228109228109245461737Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-97357
NC_017168:3977767:3996801399680139985371737Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-97357
NC_017265:2586729:2605763260576326074991737Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-97356
NC_010634:1755548:1780154178015417818991746Yersinia pseudotuberculosis PB1/+, complete genomeOmpA/MotB domain-containing protein3e-97356
NC_010634:3720214:3739711373971137414471737Yersinia pseudotuberculosis PB1/+, complete genomeOmpA/MotB domain-containing protein5e-97355
NC_006155:3805640:3826630382663038283661737Yersinia pseudotuberculosis IP 32953, complete genomeputative PAL/OmpA-family membrane protein.5e-97355
NC_005810:3917254:3936967393696739387031737Yersinia pestis biovar Microtus str. 91001, complete genomeOmpA family membrane protein5e-97355
NC_004088:2966331:2985362298536229870981737Yersinia pestis KIM, complete genomehypothetical protein5e-97355
NC_008150:317903:3358643358643376001737Yersinia pestis Antiqua, complete genomeputative OmpA-family membrane protein5e-97355
NC_008149:2802392:2821426282142628231621737Yersinia pestis Nepal516, complete genomeOmpA-family membrane protein5e-97355
NC_004088:3689000:3708648370864837103841737Yersinia pestis KIM, complete genomehypothetical protein5e-97355
NC_003143:1059580:1080541108054110822771737Yersinia pestis CO92, complete genomeputative OmpA-family membrane protein5e-97355
NC_009381:588137:6051536051536068891737Yersinia pestis Pestoides F chromosome, complete genomeOmpA-family membrane protein5e-97355
NC_014029:961522:9785559785559802911737Yersinia pestis Z176003 chromosome, complete genomeputative OmpA-family membrane protein5e-97355
NC_017154:1644404:1672117167211716738531737Yersinia pestis D106004 chromosome, complete genomeputative OmpA-family membrane protein5e-97355
NC_017160:1628500:1652611165261116543471737Yersinia pestis D182038 chromosome, complete genomeputative OmpA-family membrane protein5e-97355
NC_017265:809943:8269658269658287011737Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative OmpA-family membrane protein5e-97355
NC_017168:3286:2299722997247331737Yersinia pestis A1122 chromosome, complete genomeOmpA/MotB domain-containing protein4e-97355
NC_008149:3556999:3576600357660035782611662Yersinia pestis Nepal516, complete genomePAL/OmpA-family membrane protein7e-94345
NC_008563:3119284:3121335312133531229481614Escherichia coli APEC O1, complete genomeputative outer membrane protein7e-90331
NC_009648:3476000:3478172347817234798751704Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-83309
NC_011283:942594:9581769581769598791704Klebsiella pneumoniae 342 chromosome, complete genomeOmpA domain-containing protein7e-83308
NC_010501:3575726:3597764359776435994941731Pseudomonas putida W619, complete genomeOmpA/MotB domain protein1e-78294
NC_009832:1946401:1963068196306819647771710Serratia proteamaculans 568, complete genomeOmpA/MotB domain protein3e-73276
NC_016845:2306744:2330351233035123320571707Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,OmpA/MotB domain-containing protein2e-72273
NC_009648:1487692:1487692148769214893981707Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative outer membrane protein2e-72273
NC_012731:2302974:2302974230297423046801707Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative outer membrane protein1e-71271
NC_013956:4579759:4594394459439445961811788Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-71270
NC_017060:125480:1254801254801271561677Rahnella aquatilis HX2 plasmid PRA1, complete sequenceOmpA/MotB domain-containing protein7e-69262
NC_014121:1822895:1823680182368018251071428Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeOmpA/MotB domain-containing protein1e-66254
NC_010067:2529750:2553071255307125547501680Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-60234
NC_016612:5600177:5616951561695156186751725Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein4e-54213
NC_012731:3193880:3211181321118132128781698Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-52207
NC_011283:2103500:2105625210562521073221698Klebsiella pneumoniae 342 chromosome, complete genomeOmpA domain-containing protein2e-52207
NC_016845:3238507:3259981325998132616781698Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-52206
NC_009648:2465613:2488774248877424904711698Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-52206
NC_017154:902739:921810921810922436627Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-51202
NC_007348:2011957:2012449201244920141761728Ralstonia eutropha JMP134 chromosome 2, complete sequenceOmpA/MotB6e-48192
NC_017154:902739:9207019207019218131113Yersinia pestis D106004 chromosome, complete genomeOmpA-family membrane protein1e-35151
NC_014118:1171411:1189956118995611911881233Burkholderia sp. CCGE1002 chromosome chromosome 2, completeOmpA/MotB domain protein2e-34147
NC_012721:1395417:1416969141696914187771809Burkholderia glumae BGR1 chromosome 2, complete genomeOuter membrane protein2e-34147
NC_010552:592154:5921545921545939171764Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceOmpA/MotB domain protein3e-34147
NC_016590:1183470:1204844120484412065921749Burkholderia sp. YI23 chromosome 3, complete sequenceOmpA/MotB family outer membrane protein3e-33143
NC_012721:137046:1552481552481569571710Burkholderia glumae BGR1 chromosome 2, complete genomeOuter membrane protein8e-26119
NC_006351:101500:1156751156751173511677Burkholderia pseudomallei K96243 chromosome 2, complete sequenceOmpA family membrane protein3e-21103
NC_007435:1914375:1954129195412919558051677Burkholderia pseudomallei 1710b chromosome II, complete sequenceOmpA family membrane protein1e-20102
NC_013282:1256769:1257931125793112593281398Cronobacter turicensis, complete genomehypothetical protein2e-1067.8
NC_009436:3117661:315809731580973158642546Enterobacter sp. 638, complete genomehypothetical protein2e-0964.7
NC_007516:2037477:205158920515892052242654Synechococcus sp. CC9605, complete genomeOuter membrane protein and related peptidoglycan-associated (lipo)proteins-like1e-0758.9
NC_005071:988815:997299997299997943645Prochlorococcus marinus str. MIT 9313, complete genomeBacterial outer membrane protein1e-0758.9
NC_007912:335500:3542733542733553671095Saccharophagus degradans 2-40, complete genomehypothetical protein7e-0756.2
NC_014933:364463:3704573704573717161260Bacteroides helcogenes P 36-108 chromosome, complete genomeOmpA/MotB domain protein1e-0655.5
NC_017059:747624:756885756885757763879Rhodospirillum photometricum DSM 122, complete genomeOuter membrane protein OmpA1e-0655.1
NC_020126:2216926:2216926221692622225475622Myxococcus stipitatus DSM 14675, complete genomekelch domain-containing protein4e-0653.9