Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:335500 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
335728336255528hypothetical proteinBLASTP
336995337285291histidine kinaseQuickGO ontology
3375273387231197putative transcriptional regulator Fis familyQuickGO ontologyBLASTP
338828339121294hypothetical protein
3398583410091152ATPaseQuickGO ontologyBLASTP
341150341602453Secretion protein HlyDQuickGO ontology
342260342475216hypothetical protein
3438703450631194hypothetical proteinBLASTP
345072345722651hypothetical protein
3461953474331239hypothetical protein
347913348890978hypothetical proteinBLASTP
349393350370978hypothetical proteinBLASTP
3505463516341089hypothetical protein
3516513540052355hypothetical protein
3542733553671095hypothetical proteinBLASTP
3557363573761641hypothetical proteinBLASTP
3574953596392145Outer membrane receptor proteins mostly Fe transport-likeQuickGO ontologyBLASTP