Pre_GI: BLASTP Hits

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Query: NC_004668:3156247:3163456 Enterococcus faecalis V583, complete genome

Start: 3163456, End: 3164313, Length: 858

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015389:114469:120227120227121075849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family1e-51203
NC_015389:175406:182891182891183802912Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family7e-31134
NC_008314:1202963:120453312045331205366834Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator2e-21103
NC_014410:2329838:234588623458862346728843Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, RpiR family3e-2099.4
NC_004193:375416:641553641553642401849Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator3e-1995.9
NC_015634:2933712:295589529558952956770876Bacillus coagulans 2-6 chromosome, complete genomeRpiR family transcriptional regulator1e-1894
NC_014377:321949:336280336280337122843Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, RpiR family5e-1891.7
NC_008525:1013979:103232610323261033168843Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator1e-1790.5
NC_011661:1807101:181101118110111811856846Dictyoglomus turgidum DSM 6724, complete genometranscriptional regulator, RpiR family5e-1788.6
NC_020418:1397112:141023714102371411124888Morganella morganii subsp. morganii KT, complete genomeSialic acid utilization regulator, RpiR family6e-1788.2
NC_009708:1497898:151619215161921517070879Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRpiR family transcriptional regulator1e-1687
NC_014219:192555:206560206560207414855Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, RpiR family2e-1686.3
NC_013855:1268424:128469812846981285603906Azospirillum sp. B510 plasmid pAB510a, complete sequenceDNA-binding transcriptional regulator3e-1685.5
NC_013421:2306000:230610423061042307030927Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, RpiR family8e-1684.3
NC_016901:2542110:254373725437372544591855Shewanella baltica OS678 chromosome, complete genomeRpiR family transcriptional regulator8e-1684.3
NC_012912:2553391:257205325720532572922870Dickeya zeae Ech1591, complete genometranscriptional regulator, RpiR family2e-1583.2
NC_009485:1222697:123782312378231238635813Bradyrhizobium sp. BTAi1 chromosome, complete genomeRpiR family transcriptional regulator2e-1582.8
NC_013364:2355298:235915723591572360026870Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator3e-1582.4
NC_013361:2591829:259568825956882596557870Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional regulator HexR3e-1582.4
NC_011741:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator HexR3e-1582.4
CU928160:1978500:198239319823931983262870Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator3e-1582.4
NC_010658:1933605:193746419374641938333870Shigella boydii CDC 3083-94, complete genometranscriptional regulator, rpiR family5e-1582
NC_016822:1339058:135362613536261354495870Shigella sonnei 53G, complete genomeDNA-binding transcriptional regulator HexR5e-1581.6
NC_007384:1355060:137077813707781371647870Shigella sonnei Ss046, complete genomehypothetical protein6e-1581.6
NC_013192:171000:189492189492190352861Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, RpiR family8e-1581.3
NC_020063:2449554:247206824720682472898831Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator9e-1580.9
NC_003909:927955:935762935762936625864Bacillus cereus ATCC 10987, complete genometranscriptional regulator, RpiR family, putative1e-1480.9
NC_014364:394899:436135436135436983849Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, RpiR family1e-1480.9
NC_013515:1125739:113914011391401139958819Streptobacillus moniliformis DSM 12112, complete genometranscriptional regulator, RpiR family2e-1479.7
NC_008358:2574343:257961025796102580443834Hyphomonas neptunium ATCC 15444, complete genometranscriptional regulator, RpiR family2e-1479.7
NC_008010:200796:205845205845206717873Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, RpiR family4e-1479
NC_014334:99000:117879117879118748870Lactobacillus casei str. Zhang chromosome, complete genometranscriptional regulator4e-1479
NC_006511:1770000:178216817821681783049882Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator6e-1478.2
NC_011147:1763681:177735117773511778232882Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator6e-1478.2
NC_014958:629459:631573631573632421849Deinococcus maricopensis DSM 21211 chromosome, complete genomeRpiR family transcriptional regulator6e-1478.2
NC_016857:1163919:117159811715981172512915Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator2e-1377
NC_003197:1207597:121527512152751216156882Salmonella typhimurium LT2, complete genomeputative transcriptional regulator2e-1376.6
NC_011094:1166271:117395011739501174831882Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, RpiR family protein2e-1376.6
NC_016810:1163919:117159811715981172479882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-1376.6
NC_016856:1165941:117362011736201174501882Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-1376.6
NC_016860:1205282:121296112129611213842882Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-1376.6
NC_016863:1165232:117291111729111173792882Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-1376.6
NC_013171:1677543:168050016805001681339840Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, RpiR family2e-1376.6
NC_011080:1209935:121761412176141218495882Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, RpiR family2e-1376.3
NC_003198:1117687:112536611253661126247882Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator2e-1376.3
NC_010102:1979742:199189419918941992775882Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1376.3
NC_011083:1216500:122000412200041220885882Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, RpiR family2e-1376.3
NC_017046:1164176:117185511718551172679825Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator2e-1376.3
NC_014751:302152:303967303967304800834Mycoplasma leachii PG50 chromosome, complete genomeSIS domain protein2e-1376.3
NC_006905:1186895:119457411945741195455882Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator2e-1376.3
NC_004631:1842050:185456618545661855447882Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator2e-1376.3
NC_011205:1186097:119377511937751194656882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853RpiR family transcriptional regulator2e-1376.3
NC_011274:1094379:110205811020581102939882Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator2e-1376.3
NC_011294:1085447:109314410931441094025882Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator2e-1376.3
NC_012125:2646792:265912026591202660001882Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-1376.3
NC_016831:1905289:192213519221351923016882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator2e-1376.3
NC_016832:1838220:185141618514161852297882Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,RpiR-family transcriptional regulator2e-1376.3
NC_015224:3892972:390341039034103904270861Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,transcriptional regulator6e-1374.7
NC_010067:1782998:179623817962381797119882Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-1374.7
NC_015152:272500:274117274117274971855Spirochaeta sp. Buddy chromosome, complete genomeRpiR family transcriptional regulator1e-1274.3
NC_012578:1838470:187236418723641873200837Vibrio cholerae M66-2 chromosome I, complete sequencePutative HTH-type transcriptional regulator ybbH2e-1273.6
NC_009457:1444449:147833414783341479170837Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-1273.6
NC_016445:1363831:139663113966311397446816Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completesialic acid utilization regulator RpiR family2e-1273.6
NC_012668:1688500:172144717214471722277831Vibrio cholerae MJ-1236 chromosome 1, complete sequencesialic acid utilization regulator RpiR family2e-1273.6
NC_016511:1212282:121507712150771215949873Propionibacterium acnes TypeIA2 P.acn31 chromosome, completetranscriptional regulator2e-1272.8
NC_016512:1211653:121444812144481215320873Propionibacterium acnes TypeIA2 P.acn17 chromosome, completetranscriptional regulator3e-1272.8
NC_016516:1203000:120589412058941206766873Propionibacterium acnes TypeIA2 P.acn33 chromosome, completetranscriptional regulator3e-1272.8
NC_015389:809474:815699815699816547849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family3e-1272.4
NC_006085:1234587:123938512393851240257873Propionibacterium acnes KPA171202, complete genomeputative transcriptional regulator4e-1272
NC_014039:1238500:124142412414241242296873Propionibacterium acnes SK137 chromosome, complete genometranscriptional regulator, RpiR family4e-1272
NC_017047:4298207:432818443281844328924741Rahnella aquatilis HX2 chromosome, complete genomeRpiR family transcriptional regulator5e-1272
NC_015061:4203767:423426942342694235009741Rahnella sp. Y9602 chromosome, complete genometranscriptional regulator, RpiR family5e-1272
NC_017270:1755552:176398117639811764817837Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSialic acid utilization regulator, RpiR family6e-1271.6
NC_007645:713930:730736730736731593858Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator8e-1271.2
NC_008800:4013298:402615540261554027015861Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,transcriptional regulator1e-1170.9
NC_017511:852260:870245870245871129885Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative RpiR-family transcriptional regulator1e-1170.5
NC_003210:2879906:288124328812432882049807Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1170.1
NC_007651:1726472:1749745174974517516701926Burkholderia thailandensis E264 chromosome I, complete sequenceglucokinase/transcriptional regulator, RpiR family, fusion3e-1168.9
NC_017191:2514401:252743625274362528161726Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein4e-1168.9
NC_017188:2512357:252539225253922526117726Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein4e-1168.9
NC_009439:4913767:491696849169684917834867Pseudomonas mendocina ymp, complete genomeRpiR family transcriptional regulator2e-1066.6
NC_021066:601029:611221611221612078858Raoultella ornithinolytica B6, complete genomeDNA-binding transcriptional repressor RpiR3e-1066.2
NC_016602:2292518:231509123150912315954864Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetranscriptional regulator2e-1066.2
NC_007510:973828:9935829935829955101929Burkholderia sp. 383 chromosome 1, complete sequenceGlucokinase2e-1066.2
NC_013895:605488:606998606998607921924Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscriptional regulator, RpiR family6e-1065.1
NC_008262:2824503:283909428390942839822729Clostridium perfringens SM101, complete genometranscriptional regulator, RpiR family8e-1064.3
NC_016605:132253:139861139861140607747Pediococcus claussenii ATCC BAA-344 chromosome, complete genomehelix-turn-helix domain, rpiR family protein2e-0963.5
NC_009725:2517428:253457325345732535298726Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein3e-0962.4
NC_006905:3717306:372665337266533727534882Salmonella enterica subsp. enterica serovar Choleraesuis strProtein rpiR5e-0962
NC_006582:2205154:220515422051542205891738Bacillus clausii KSM-K16, complete genometranscriptional regulator7e-0961.6
NC_012691:2146473:215826621582662159144879Tolumonas auensis DSM 9187, complete genometranscriptional regulator, RpiR family8e-0961.2
NC_013353:5022196:502319050231905024080891Escherichia coli O103:H2 str. 12009, complete genometranscriptional repressor1e-0860.8
AP010958:5022196:502319050231905024080891Escherichia coli O103:H2 str. 12009 DNA, complete genometranscriptional repressor1e-0860.8
NC_000913:4307471:431012443101244311014891Escherichia coli K12, complete genomeDNA-binding transcriptional repressor2e-0860.1
NC_010498:4656716:465771046577104658600891Escherichia coli SMS-3-5, complete genomeHTH-type transcriptional regulator RpiR (Als operon repressor)2e-0860.1
NC_010468:4305105:432097043209704321860891Escherichia coli ATCC 8739, complete genometranscriptional regulator, RpiR family2e-0860.1
NC_010473:4409492:441048644104864411376891Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional repressor2e-0860.1
CP002516:4431235:444760744476074448497891Escherichia coli KO11, complete genometranscriptional regulator, RpiR family2e-0860.1
AC_000091:4313167:431677943167794317669891Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional repressor2e-0860.1
NC_008253:4541915:454482645448264545716891Escherichia coli 536, complete genomeprotein RpiR2e-0860.1
NC_011750:4719477:472047147204714721361891Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional repressor RpiR2e-0860.1
NC_016902:4431235:444760744476074448497891Escherichia coli KO11FL chromosome, complete genomeRpiR family transcriptional regulator2e-0860.1
NC_012967:4289929:429092342909234291813891Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional repressor RpiR2e-0860.1
NC_012759:4247865:424885942488594249749891Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional repressor RpiR2e-0860.1
NC_011742:4569683:457329545732954574185891Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional repressor RpiR2e-0860.1
NC_011415:4582388:458338245833824584272891Escherichia coli SE11 chromosome, complete genomeDNA-binding transcriptional repressor RpiR2e-0860.1
NC_008563:4656000:465876746587674659690924Escherichia coli APEC O1, complete genomeputative transcriptional regulator RpiR2e-0859.7
NC_004431:4867648:487126048712604872183924Escherichia coli CFT073, complete genomeProtein rpiR2e-0859.7
NC_012947:4106031:412229541222954123185891Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeDNA-binding transcriptional repressor RpiR2e-0859.7
NC_014841:131308:131308131308132201894Pantoea sp. At-9b plasmid pPAT9B04, complete sequencetranscriptional regulator, RpiR family5e-0755.5
NC_006624:405966:4068414068414080611221Thermococcus kodakarensis KOD1, complete genomebifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase4e-0755.5
NC_014551:2510000:255888125588812559606726Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-0653.9
NC_020410:2509057:253812525381252538850726Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeTranscriptional regulator, RpiR family / Phosphosugar-binding transcriptional regulator, RpiR family1e-0653.9
NC_014206:3391352:339784933978493398616768Geobacillus sp. C56-T3 chromosome, complete genomeRpiR family transcriptional regulator1e-0653.9
NC_020272:1384525:138963613896361390361726Bacillus amyloliquefaciens IT-45, complete genomeenolase2e-0653.5
NC_015389:616430:643533643533644402870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family3e-0652.4
NC_009328:3322802:332775633277563328502747Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeregulator4e-0652.4
NC_008528:331260:332858332858333635778Oenococcus oeni PSU-1, complete genome6e-0651.6
NC_003413:214120:2354892354892367931305Pyrococcus furiosus DSM 3638, complete genomehexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate formaldehyde lyase)7e-0651.2