Pre_GI: BLASTP Hits

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Query: NC_011205:1633353:1643955 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1643955, End: 1644479, Length: 525

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1468691:147932414793241480085762Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative periplasmic amino acid-binding protein1e-98358
NC_011294:1493849:150443215044321505193762Salmonella enterica subsp. enterica serovar Enteritidis stramino acid-binding protein1e-98358
NC_011274:1544653:155523815552381555999762Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91periplasmic amino acid-binding protein1e-98358
NC_011149:1429523:148250014825001483261762Salmonella enterica subsp. enterica serovar Agona str. SL483,putative periplasmic binding protein5e-98356
NC_011080:1709612:172024417202441721005762Salmonella enterica subsp. enterica serovar Newport str. SL254,putative periplasmic binding protein5e-98356
NC_011083:1761352:177199317719931772754762Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative periplasmic binding protein5e-98356
NC_003197:1713259:172389117238911724652762Salmonella typhimurium LT2, complete genomeputative periplasmic binding protein5e-98356
NC_012125:2143246:215382921538292154590762Salmonella enterica subsp. enterica serovar Paratyphi C strainperiplasmic amino acid-binding protein5e-98356
NC_016810:1670112:168074416807441681505762Salmonella enterica subsp. enterica serovar Typhimurium strputative periplasmic amino acid-binding protein5e-98356
NC_016856:1723236:173386817338681734629762Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative periplasmic binding protein5e-98356
NC_016857:1670112:168074416807441681505762Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative periplasmic binding protein5e-98356
NC_016860:1710950:172158217215821722343762Salmonella enterica subsp. enterica serovar Typhimurium strputative periplasmic amino acid-binding protein5e-98356
NC_016863:1671428:168206016820601682821762Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative periplasmic binding protein5e-98356
NC_017046:1669995:168062716806271681388762Salmonella enterica subsp. enterica serovar Typhimurium str. 798periplasmic amino acid-binding protein5e-98356
NC_010102:1388344:139891313989131399674762Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-98356
NC_004631:1587000:159137915913791592140762Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative periplasmic amino acid-binding protein1e-97354
NC_003198:1378457:138904113890411389802762Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative periplasmic amino acid-binding protein1e-97354
NC_016832:1582273:158832915883291589090762Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Extracellular solute-binding protein family 31e-97354
NC_011094:1683979:169463116946311695392762Salmonella enterica subsp. enterica serovar Schwarzengrund strperiplasmic binding protein7e-97352
NC_015761:1599000:160880216088021609560759Salmonella bongori NCTC 12419, complete genomeperiplasmic amino acid-binding protein5e-90329
NC_014500:3519722:352341035234103524168759Dickeya dadantii 3937 chromosome, complete genomeputative periplasmic binding protein2e-80297
NC_012779:3570720:358333135833313583969639Edwardsiella ictaluri 93-146, complete genomebacterial extracellular solute-binding protein, family 38e-60229
NC_006396:320853:336442336442337230789Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceglutamine ABC transporter permease protein9e-1579.7
NC_016051:1471782:148883514888351489596762Thermococcus sp. AM4 chromosome, complete genomeglutamine ABC transporter periplasmic glutamine-binding protein2e-1375.5
NC_004578:6089958:609074660907466091510765Pseudomonas syringae pv. tomato str. DC3000, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein1e-1066.2
NC_007604:41495:750917509175852762Synechococcus elongatus PCC 7942, complete genomeextracellular solute-binding protein, family 31e-1065.9
NC_020829:5174354:519060451906045191356753Pseudomonas denitrificans ATCC 13867, complete genomeperiplasmic binding protein2e-1065.1
NC_007651:1726472:174854917485491749349801Burkholderia thailandensis E264 chromosome I, complete sequenceamino acid ABC transporter, periplasmic amino acid-binding protein2e-0962.4
NC_013202:1620753:162075316207531621529777Halomicrobium mukohataei DSM 12286, complete genomeextracellular solute-binding protein family 36e-0960.1
NC_008011:924392:939981939981940730750Lawsonia intracellularis PHE/MN1-00, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain2e-0858.5
NC_014323:3976351:402369340236934024442750Herbaspirillum seropedicae SmR1 chromosome, complete genomeglutamine ABC transporter/signal transduction system periplasmic protein3e-0858.2
NC_015681:401084:406716406716407462747Thermodesulfatator indicus DSM 15286 chromosome, complete genomefamily 3 extracellular solute-binding protein5e-0857.4
NC_009439:4661102:467391946739194674671753Pseudomonas mendocina ymp, complete genomeextracellular solute-binding protein4e-0857.4
NC_010501:5442000:544314554431455443897753Pseudomonas putida W619, complete genomeextracellular solute-binding protein family 36e-0857
NC_017986:2985514:300434230043423005094753Pseudomonas putida ND6 chromosome, complete genomeextracellular solute-binding protein1e-0756.2
NC_009651:19909:254482544826200753Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,hypothetical protein2e-0755.1
NC_015428:823420:8399038399038420502148Lactobacillus buchneri NRRL B-30929 chromosome, complete genomepolar amino acid ABC transporter inner membrane subunit3e-0754.7
NC_010723:1084000:108405410840541084860807Clostridium botulinum E3 str. Alaska E43, complete genomeamino acid ABC transporter, substrate-binding protein4e-0754.3
NC_010634:2894631:293369429336942934437744Yersinia pseudotuberculosis PB1/+, complete genomecationic amino acid ABC transporter, periplasmic binding protein4e-0754.3
NC_006155:2979500:301575330157533016496744Yersinia pseudotuberculosis IP 32953, complete genomeglutamine ABC transporter periplasmic-binding protein4e-0754.3
NC_009708:1735903:173659417365941737337744Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeglutamine ABC transporter periplasmic protein4e-0754.3
NC_009381:2138625:217472321747232175466744Yersinia pestis Pestoides F chromosome, complete genomeglutamine ABC transporter periplasmic protein4e-0754.3
NC_012660:5242392:524577452457745246559786Pseudomonas fluorescens SBW25 chromosome, complete genomeputative histidine-binding periplasmic protein3e-0754.3
NC_009256:458649:480091480091480891801Burkholderia vietnamiensis G4 chromosome 1, complete sequenceextracellular solute-binding protein5e-0753.9
NC_007645:3870466:388925938892593890059801Hahella chejuensis KCTC 2396, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain6e-0753.5
NC_010508:451184:465275465275466075801Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceextracellular solute-binding protein family 37e-0753.5
NC_010551:415487:429248429248430048801Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceextracellular solute-binding protein family 38e-0753.1
NC_015913:178451:194768194768195571804Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeamino acid ABC transporter, amino acid-binding protein9e-0753.1
CP002797:4775780:479209547920954792841747Escherichia coli NA114, complete genomeGlutamine ABC transporter, periplasmic glutamine-binding protein1e-0652.8
NC_007510:409843:409843409843410643801Burkholderia sp. 383 chromosome 1, complete sequenceABC amino acid transporter, periplasmic ligand binding protein1e-0652.4
NC_012121:1444633:1449993144999314514681476Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein1e-0652.4
NC_008542:483761:504205504205505005801Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceextracellular solute-binding protein, family 31e-0652.4
NC_008060:2913671:292018429201842920984801Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceextracellular solute-binding protein, family 31e-0652.4
NC_007796:31691:490514905149881831Methanospirillum hungatei JF-1, complete genomeextracellular solute-binding protein, family 32e-0652
NC_016641:2735054:273728927372892738056768Paenibacillus terrae HPL-003 chromosome, complete genomeamino acid ABC transporter2e-0652
NC_004557:558500:577754577754578569816Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein4e-0651.2
NC_007796:31691:480864808648904819Methanospirillum hungatei JF-1, complete genomeextracellular solute-binding protein, family 33e-0651.2
NC_008261:676000:697962697962698798837Clostridium perfringens ATCC 13124, complete genomeamino acid ABC transporter, amino acid-binding protein3e-0651.2
NC_008262:654000:676152676152676988837Clostridium perfringens SM101, complete genomeamino acid ABC transporter4e-0650.8
NC_010694:2492378:249237824923782493124747Erwinia tasmaniensis, complete genomeGlutamine high-affinity transporter5e-0650.8
NC_015385:456000:478397478397479167771Treponema succinifaciens DSM 2489 chromosome, complete genomeABC-type transporter, periplasmic subunit family 35e-0650.4
NC_014958:1335650:134834013483401349095756Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit5e-0650.4
NC_015425:34861:513965139652241846Clostridium botulinum BKT015925 chromosome, complete genomeamino acid ABC transporter substrate-binding protein5e-0650.4
NC_003366:728859:750652750652751488837Clostridium perfringens str. 13, complete genomeprobable amino acid ABC transporter9e-0649.7