Pre_GI: BLASTP Hits

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Query: NC_010067:2881448:2902447 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2902447, End: 2902989, Length: 543

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:1166568:118821311882131188755543Escherichia coli CFT073, complete genomeF1C major fimbrial subunit precursor3e-1684.7
NC_011745:5114500:512939151293915129939549Escherichia coli ED1a chromosome, complete genomemajor type 1 subunit fimbrin2e-1581.6
NC_008253:4817864:484835348483534848901549Escherichia coli 536, complete genometype-1 fimbrial major subunit2e-1581.6
NC_007946:4875997:490785749078574908411555Escherichia coli UTI89, complete genometype 1 fimbriae major subunit FimA3e-1581.6
NC_011751:1770376:179058817905881791199612Escherichia coli UMN026 chromosome, complete genomeputative major fimbrial subunit FmlA3e-1581.3
CP002797:4656327:467108046710804671628549Escherichia coli NA114, complete genomePutative type 1 fimbriae major subunit FimA4e-1580.9
CP002185:4791811:480555648055564806104549Escherichia coli W, complete genomeputative fimbrial subunit protein4e-1580.9
CP002516:4199133:420676642067664207314549Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein4e-1580.9
CU928160:4570498:460375746037574604305549Escherichia coli IAI1 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)4e-1580.9
NC_011741:4570498:460375746037574604305549Escherichia coli IAI1 chromosome, complete genomemajor type 1 subunit fimbrin4e-1580.9
NC_013364:5255700:527326252732625273810549Escherichia coli O111:H- str. 11128, complete genomemajor type 1 subunit fimbrin (pilin) FimA4e-1580.9
NC_016902:4199133:420676642067664207314549Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein4e-1580.9
NC_007946:1632025:165034616503461650957612Escherichia coli UTI89, complete genomeputative Fml fimbriae subunit4e-1580.9
NC_011742:1574036:158927315892731589884612Escherichia coli S88 chromosome, complete genomemajor fimbrial subunit FmlA4e-1580.9
CU928160:1579375:159958615995861600197612Escherichia coli IAI1 chromosome, complete genomeputative major fimbrial subunit FmlA4e-1580.9
NC_011741:1579375:159958615995861600197612Escherichia coli IAI1 chromosome, complete genomeputative major fimbrial subunit FmlA4e-1580.9
CP002797:1591000:160314216031421603606465Escherichia coli NA114, complete genometype 1 fimbrial protein6e-1580.5
CP002185:1681327:170153817015381702101564Escherichia coli W, complete genomeputative fimbrial protein6e-1580.5
CP002516:2395578:240374724037472404310564Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein6e-1580.5
NC_016902:2395578:240374724037472404310564Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein6e-1580.5
NC_002655:1966464:197404619740461974609564Escherichia coli O157:H7 EDL933, complete genomeputative major fimbrial subunit5e-1580.5
NC_011283:819970:825078825078825626549Klebsiella pneumoniae 342 chromosome, complete genometype-1 fimbrial protein8e-1580.1
NC_013361:5580741:559163055916305592178549Escherichia coli O26:H11 str. 11368 chromosome, complete genomemajor type 1 subunit fimbrin (pilin) FimA7e-1580.1
NC_004741:4364235:437265243726524373200549Shigella flexneri 2a str. 2457T, complete genomemajor type 1 subunit fimbrin (pilin)7e-1580.1
NC_004337:4374500:438155643815564382104549Shigella flexneri 2a str. 301, complete genomemajor type 1 subunit fimbrin (pilin)7e-1580.1
NC_008258:4345400:435222443522244352772549Shigella flexneri 5 str. 8401, complete genomemajor type 1 subunit fimbrin (pilin)7e-1580.1
NC_017328:4417000:442400144240014424549549Shigella flexneri 2002017 chromosome, complete genomeType-1 fimbrial major subunit7e-1580.1
NC_011751:5070597:508247450824745083022549Escherichia coli UMN026 chromosome, complete genomemajor type 1 subunit fimbrin7e-1580.1
NC_000913:4528278:454113845411384541686549Escherichia coli K12, complete genomemajor type 1 subunit fimbrin (pilin)7e-1580.1
AC_000091:4534935:454779545477954548343549Escherichia coli W3110 DNA, complete genomemajor type 1 subunit fimbrin7e-1580.1
NC_012759:4467288:447962344796234480171549Escherichia coli BW2952 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)7e-1580.1
NC_012947:3883484:388953138895313890079549Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein7e-1580.1
NC_012967:4510393:452402945240294524577549Escherichia coli B str. REL606 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)7e-1580.1
NC_016612:5296076:532480953248095325351543Klebsiella oxytoca KCTC 1686 chromosome, complete genomefimbrial protein2e-1479
NC_011750:4978000:499056849905684991116549Escherichia coli IAI39 chromosome, complete genomemajor type 1 subunit fimbrin2e-1479
NC_011742:4873351:488593248859324886486555Escherichia coli S88 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)2e-1479
NC_015567:1206727:121619712161971216742546Serratia sp. AS9 chromosome, complete genomeFimbrial protein domain-containing protein1e-1479
NC_015566:1206500:121601212160121216557546Serratia sp. AS12 chromosome, complete genomeFimbrial protein domain-containing protein1e-1479
NC_010498:4930649:494773849477384948286549Escherichia coli SMS-3-5, complete genometype-1 fimbrial protein3e-1478.2
NC_010694:3178842:319544431954443196049606Erwinia tasmaniensis, complete genomeType-1 fimbrial protein, FimA4e-1477.4
NC_013941:5219841:523628752362875236835549Escherichia coli O55:H7 str. CB9615 chromosome, complete genomemajor type 1 subunit fimbrin5e-1477.4
NC_013008:5411285:542771554277155428263549Escherichia coli O157:H7 str. TW14359 chromosome, complete genomemajor type 1 subunit fimbrin5e-1477.4
NC_011353:5455224:547165454716545472202549Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype-1 fimbrial protein-like protein5e-1477.4
NC_004431:5123325:513778951377895138394606Escherichia coli CFT073, complete genomeType-1 fimbrial protein, A chain precursor5e-1477.4
NC_002695:5381576:539800653980065398554549Escherichia coli O157:H7 str. Sakai, complete genomeFimA7e-1476.6
NC_007613:4403070:441689644168964417444549Shigella boydii Sb227, complete genomemajor type 1 subunit fimbrin1e-1375.9
NC_008253:296500:311279311279311824546Escherichia coli 536, complete genomeS-fimbrial protein subunit precursor5e-1373.9
NC_011601:3951324:396399439639943964518525Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomefimbrial major protein2e-1168.2
NC_021066:4906239:490951849095184910102585Raoultella ornithinolytica B6, complete genomeFimbrin-like protein fimI precursor5e-1063.9
NC_016831:2402893:242025424202542420790537Salmonella enterica subsp. enterica serovar Gallinarum/pullorumtype-1 fimbrial protein, a chain precursor1e-0962.8
NC_015663:549425:573487573487574068582Enterobacter aerogenes KCTC 2190 chromosome, complete genomemajor subunit of type 1 fimbria4e-0961.2
NC_012947:2228235:223380422338042234286483Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein6e-0960.5
NC_012967:1546000:156656715665671567103537Escherichia coli B str. REL606 chromosome, complete genomeputative transcriptional regulator6e-0960.5
NC_016602:2854107:285845628584562858971516Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceP pilus assembly protein1e-0859.3
NC_006511:2251022:226989322698932270450558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtype-1 fimbrial protein, a chain precursor2e-0858.5
NC_011147:2247460:226507722650772265634558Salmonella enterica subsp. enterica serovar Paratyphi A strtype-1 fimbrial protein, a chain2e-0858.5
NC_010102:2495441:251341225134122513969558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0858.5
NC_004631:2366335:238447023844702385024555Salmonella enterica subsp. enterica serovar Typhi Ty2, completeType-1 fimbrial protein, a chain precursor2e-0858.2
NC_020211:103371:115508115508116044537Serratia marcescens WW4, complete genomefimbrial protein3e-0755.1
NC_021066:4906239:490573049057304906248519Raoultella ornithinolytica B6, complete genomeP pilus assembly protein, pilin FimA4e-0754.3
NC_010498:4166903:419076241907624191334573Escherichia coli SMS-3-5, complete genomelong polar fimbrial operon protein LpfA1e-0652.8
NC_011750:4490573:451443345144334515005573Escherichia coli IAI39 chromosome, complete genomeputative major fimbrial subunit1e-0652.8
NC_011751:4373961:439782843978284398400573Escherichia coli UMN026 chromosome, complete genomeputative major fimbrial subunit1e-0652.8
NC_011283:819970:824471824471824998528Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein2e-0652
NC_009348:4011160:402230940223094022860552Aeromonas salmonicida subsp. salmonicida A449, complete genometype I pilus assembly protein FimF2e-0652
NC_013282:3781149:379515337951533795629477Cronobacter turicensis, complete genomeFimbria A protein2e-0651.6
NC_020211:379000:379074379074379625552Serratia marcescens WW4, complete genomefimbrial protein2e-0651.6
NC_010694:3178842:319483431948343195373540Erwinia tasmaniensis, complete genomeFimI fimbrial protein, FimI3e-0651.2
NC_007384:4095016:411636341163634116935573Shigella sonnei Ss046, complete genomeputative major fimbrial subunit4e-0650.8
NC_015424:525039:536185536185536712528Aeromonas veronii B565 chromosome, complete genomeFimbrial protein4e-0650.8
NC_017328:3935185:394245739424573943029573Shigella flexneri 2002017 chromosome, complete genomeputative major fimbrial subunit4e-0650.8
NC_004337:3590323:391679639167963917368573Shigella flexneri 2a str. 301, complete genomeputative major fimbrial subunit4e-0650.8
NC_009832:5214850:522100352210035221566564Serratia proteamaculans 568, complete genomeFimbrial protein4e-0650.8