Pre_GI Gene

Some Help

Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:1574036 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
157403615768312796membrane-associated peptidaseQuickGO ontologyBLASTP
157687615792482373porin proteinQuickGO ontologyBLASTP
157928615809711686multidrug transporter fused subunits of ABC superfamily transporter permease component ATP-binding componentQuickGO ontologyBLASTP
158126215824191158hypothetical proteinBLASTP
158247115841531683sulfataseQuickGO ontologyBLASTP
15845551585316762transcriptional regulator YdeOQuickGO ontologyBLASTP
15853911585588198hypothetical proteinBLASTP
158583615881152280oxidoreductaseQuickGO ontologyBLASTP
15892731589884612major fimbrial subunit FmlAQuickGO ontologyBLASTP
15901991590486288hypothetical proteinBLASTP
15905961590853258hypothetical proteinBLASTP
159111215924341323regulator with hipBQuickGO ontologyBLASTP
15924341592700267DNA-binding transcriptional regulator HipBQuickGO ontologyBLASTP
15930081593766759trans-aconitate 2-methyltransferaseQuickGO ontologyBLASTP
15937701594684915hypothetical proteinBLASTP
159488115963321452altronate oxidoreductaseQuickGO ontologyBLASTP
159655915979771419membrane-associated diguanylate cyclase GGDEF domainQuickGO ontologyBLASTP