Pre_GI: BLASTN Hits

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Query: NC_017986:2548720 Pseudomonas putida ND6 chromosome, complete genome

Start: 2548720, End: 2604415, Length: 55696

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:27783277836731639534Pseudomonas putida F1, complete genome042440BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome040750BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome040720BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome03992BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome03473BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome03471BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome03265BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome02981BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome01360BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01025BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01025BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome0918BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome0850BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome0720BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome0676BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome3e-156561BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome6e-105391BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome5e-102381BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome4e-66262BLASTN svgBLASTP svg
NC_004129:26091892609189263251823330Pseudomonas fluorescens Pf-5, complete genome4e-66262BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome5e-59238BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-56230BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome1e-50210BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome5e-50208BLASTN svgBLASTP svg
NC_020209:39737639737645309955724Pseudomonas poae RE*1-1-14, complete genome1e-41180BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome6e-37165BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome6e-37165BLASTN svgBLASTP svg
NC_018691:1322389*1322389134428821900Alcanivorax dieselolei B5 chromosome, complete genome1e-35161BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome1e-35161BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome1e-35161BLASTN svgBLASTP svg
NC_011901:342777*34277736771724941Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-33151BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome6e-31145BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome9e-30141BLASTN svgBLASTP svg
NC_007404:13880491388049141186723819Thiobacillus denitrificans ATCC 25259, complete genome9e-30141BLASTN svgBLASTP svg
NC_015422:3513689*3513689356513551447Alicycliphilus denitrificans K601 chromosome, complete genome5e-28135BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-27133BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome9e-27131BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-23119BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome3e-23119BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome5e-22115BLASTN svgBLASTP svg
NC_009138:15839881583988160724223255Herminiimonas arsenicoxydans, complete genome2e-21113BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,8e-21111BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-20109BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome5e-19105BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome5e-19105BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,5e-19105BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,8e-18101BLASTN svgBLASTP svg
NC_020064:1962172*1962172199309930928Serratia marcescens FGI94, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_008260:228475*22847524759919125Alcanivorax borkumensis SK2, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete3e-1489.7BLASTN svgBLASTP svg
NC_004129:10149861014986103609921114Pseudomonas fluorescens Pf-5, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_014910:1591003*1591003161459423592Alicycliphilus denitrificans BC chromosome, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_014910:19125521912552193924626695Alicycliphilus denitrificans BC chromosome, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_008786:1936626*1936626196111324488Verminephrobacter eiseniae EF01-2, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_008825:2525380*2525380255303327654Methylibium petroleiphilum PM1, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_020209:19865031986503202425537753Pseudomonas poae RE*1-1-14, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_007908:33639023363902338735723456Rhodoferax ferrireducens T118, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_007908:12521891252189127831426126Rhodoferax ferrireducens T118, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_013722:24762362476236250064524410Xanthomonas albilineans, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_018868:61911361911367007150959Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_015422:3836911*3836911386031223402Alicycliphilus denitrificans K601 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_009720:67085367085369197421122Xanthobacter autotrophicus Py2, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_007947:290864*29086430939718534Methylobacillus flagellatus KT, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_008782:2568027*2568027262351455488Acidovorax sp. JS42, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_015458:2998000*2998000302249324494Pusillimonas sp. T7-7 chromosome, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_018691:198909*19890923147832570Alcanivorax dieselolei B5 chromosome, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_009512:4287605*4287605432250934905Pseudomonas putida F1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010512:10155571015557104522129665Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-0767.9BLASTN svgBLASTP svg
NC_014831:18189681818968184009921132Thermaerobacter marianensis DSM 12885 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_015458:33289053328905335692528021Pusillimonas sp. T7-7 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010612:53011355301135532701825884Mycobacterium marinum M, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013960:16936431693643171517421532Nitrosococcus halophilus Nc4 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome7e-0661.9BLASTN svgBLASTP svg