Pre_GI: BLASTN Hits

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Query: NC_016846:24500 Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,

Start: 24500, End: 54291, Length: 29792

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome06217BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome02962BLASTN svgBLASTP svg
NC_011083:15243371524337154332418988Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,02912BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome02910BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid02845BLASTN svgBLASTP svg
NC_014976:2231984*2231984225555323570Bacillus subtilis BSn5 chromosome, complete genome02341BLASTN svgBLASTP svg
NC_009651:19909199094332823420Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,01629BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete01626BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome01626BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,01626BLASTN svgBLASTP svg
NC_006856:26438*264384625619819Salmonella enterica subsp. enterica serovar Choleraesuis str01626BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,01622BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome01620BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome01055BLASTN svgBLASTP svg
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome0858BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete0759BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence0751BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome0720BLASTN svgBLASTP svg
NC_011667:1*11990019900Thauera sp. MZ1T plasmid pTha01, complete sequence0656BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-129470BLASTN svgBLASTP svg
NC_010660:175200*17520020478429585Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence6e-125456BLASTN svgBLASTP svg
NC_007607:870008700012362836629Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence2e-124454BLASTN svgBLASTP svg
NC_007385:15751615751617664619131Shigella sonnei Ss046 plasmid pSS_046, complete sequence2e-122448BLASTN svgBLASTP svg
NC_007274:72979729799468121703Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete4e-117430BLASTN svgBLASTP svg
NC_013850:23576082357608238209924492Klebsiella variicola At-22 chromosome, complete genome8e-112412BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome8e-112412BLASTN svgBLASTP svg
NC_008740:14149261414926144139326468Marinobacter aquaeolei VT8, complete genome1e-95359BLASTN svgBLASTP svg
NC_008609:1976403*1976403207096194559Pelobacter propionicus DSM 2379, complete genome1e-95359BLASTN svgBLASTP svg
NC_007973:32408663240866326591125046Ralstonia metallidurans CH34 chromosome 1, complete sequence1e-95359BLASTN svgBLASTP svg
NC_004757:90541790541793018024764Nitrosomonas europaea ATCC 19718, complete genome7e-94353BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome3e-93351BLASTN svgBLASTP svg
NC_008344:1364142*1364142138709922958Nitrosomonas eutropha C91, complete genome1e-92349BLASTN svgBLASTP svg
NC_008341:29038290385221923182Nitrosomonas eutropha C91 plasmid1, complete sequence1e-92349BLASTN svgBLASTP svg
NC_003384:10903610903613209923064Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid1e-92349BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome2e-87331BLASTN svgBLASTP svg
NC_008463:12930791293079133019337115Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-83317BLASTN svgBLASTP svg
NC_011749:34056*340565613322078Escherichia coli UMN026 plasmid p1ESCUM, complete sequence3e-77297BLASTN svgBLASTP svg
NC_010801:42190642190645748035575Burkholderia multivorans ATCC 17616 chromosome 3, complete1e-55226BLASTN svgBLASTP svg
NC_004349:393839382609922162Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence1e-42182BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome1e-36163BLASTN svgBLASTP svg
NC_008786:15538331553833157650522673Verminephrobacter eiseniae EF01-2, complete genome3e-31145BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-27133BLASTN svgBLASTP svg
NC_004851:15767515767518009922425Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence5e-27131BLASTN svgBLASTP svg
NC_009787:17344173444299925656Escherichia coli E24377A plasmid pETEC_35, complete sequence7e-26127BLASTN svgBLASTP svg
NC_007608:970929709212311926028Shigella boydii Sb227 plasmid pSB4_227, complete sequence4e-21111BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence4e-21111BLASTN svgBLASTP svg
NC_007777:26385802638580267126232683Frankia sp. CcI3, complete genome1e-18103BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome4e-18101BLASTN svgBLASTP svg
NC_015145:923979239712169429298Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011886:17703917703920120524167Arthrobacter chlorophenolicus A6, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_002488:18126961812696186320850513Xylella fastidiosa 9a5c, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_006363:36959369596117324215Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence3e-1695.6BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,6e-1487.7BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence6e-1487.7BLASTN svgBLASTP svg
NC_010498:22783062278306230147623171Escherichia coli SMS-3-5, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004431:32400032400034580421805Escherichia coli CFT073, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-1283.8BLASTN svgBLASTP svg
CP002797:2062006*2062006208330121296Escherichia coli NA114, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_004431:11665681166568119813631569Escherichia coli CFT073, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010693:112329523295Erwinia tasmaniensis plasmid pET46, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-1073.8BLASTN svgBLASTP svg
CU928145:4792703*4792703481092818226Escherichia coli 55989 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004556:10760631076063110003523973Xylella fastidiosa Temecula1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011748:4792703*4792703481092818226Escherichia coli 55989, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015576:14427131442713147609933387Mycobacterium sp. JDM601 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007434:24248842424884244820923326Burkholderia pseudomallei 1710b chromosome I, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_006350:1938631*1938631199668958059Burkholderia pseudomallei K96243 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_007005:31998203199820323980239983Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007298:3764048*3764048379032226275Dechloromonas aromatica RCB, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome3e-0661.9BLASTN svgBLASTP svg
AP010958:2455052*2455052247359918548Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg