Pre_GI Gene

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Host: NC_008345 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008345:4107847 Shewanella frigidimarina NCIMB 400, complete genome

Host Lineage: Shewanella frigidimarina; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the North Sea near Aberdeen, United Kingdom. Iron-reducing marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella frigidimarina is an iron-reducing marine bacterium. This organism have been isolated from seawater, sea ice, and marine algae.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
410784741091961350outer membrane efflux proteinQuickGO ontologyBLASTP
41091934110119927efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
411021041133263117heavy metal efflux pump CzcA family proteinQuickGO ontologyBLASTP
41137624114121360hypothetical proteinBLASTP
41145124114679168hypothetical proteinBLASTP
41148904115498609Group II intron maturase-specific domain proteinQuickGO ontologyBLASTP
41155444115984441transcriptional regulator MerR family proteinQuickGO ontologyBLASTP
411607041184752406heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
411847241195511080lipoprotein signal peptidaseQuickGO ontologyBLASTP
41196814120238558Resolvase N-terminal domain proteinQuickGO ontologyBLASTP
412024141218211581transposase Tn3 family proteinQuickGO ontologyBLASTP
412192641249042979transposase Tn3 family proteinQuickGO ontologyBLASTP
41250824125984903cation diffusion facilitator family transporterQuickGO ontologyBLASTP
41259714126408438PAP2 superfamily proteinQuickGO ontologyBLASTP
412652341291742652transposase Tn3 family proteinQuickGO ontologyBLASTP
412906241321483087transposase Tn3 family proteinQuickGO ontologyBLASTP
41321724132483312plasmid stabilization systemQuickGO ontologyBLASTP
41324834132743261prevent-host-death family proteinQuickGO ontologyBLASTP
41329364133895960cation diffusion facilitator family transporterQuickGO ontologyBLASTP
41339154134481567Resolvase N-terminal domain proteinQuickGO ontologyBLASTP
41344894134794306hypothetical proteinBLASTP