Pre_GI: BLASTP Hits

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Query: NC_020134:2772500:2784116 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2784116, End: 2784880, Length: 765

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2661795:267475226747522675414663Clostridium thermocellum ATCC 27405, complete genomephosphoribosyltransferase1e-31136
NC_015571:440605:465049465049465789741Porphyromonas gingivalis TDC60, complete genomecompetence protein F-like protein1e-25117
NC_002950:155873:180315180315181055741Porphyromonas gingivalis W83, complete genomecompetence protein F-related protein1e-25117
NC_009633:760872:771594771594772322729Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphoribosyltransferase2e-25115
NC_010729:265791:290164290164290904741Porphyromonas gingivalis ATCC 33277, complete genomeprobable amidophosphoribosyl-transferase3e-25115
NC_013730:6707812:671359767135976714316720Spirosoma linguale DSM 74, complete genomephosphoribosyltransferase1e-23110
NC_020054:587300:592201592201592824624Fibrella aestuarina BUZ 2 drat genomephosphoribosyltransferase7e-24110
NC_018664:239000:245616245616246338723Clostridium acidurici 9a chromosome, complete genomephosphoribosyltransferase2e-23109
NC_008255:4043045:404431440443144045024711Cytophaga hutchinsonii ATCC 33406, complete genomeamidophosphoribosyltransferase5e-23108
NC_015581:1791658:181231618123161813002687Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomephosphoribosyltransferase1e-22107
NC_015510:4982255:500506950050695005773705Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomephosphoribosyltransferase2e-22106
NC_001263:1378605:139501513950151395674660Deinococcus radiodurans R1 chromosome 1, complete sequencecompetence protein ComF, putative6e-22104
NC_007519:791679:805083805083805838756Desulfovibrio alaskensis G20 chromosome, complete genomeComF family protein2e-21102
NC_018748:1916012:193334119333411934027687Emticicia oligotrophica DSM 17448 chromosome, complete genomephosphoribosyltransferase2e-2099.8
NC_009922:2721343:273083327308332731519687Alkaliphilus oremlandii OhILAs, complete genomecompetence protein F, putative2e-1995.9
NC_011297:1224749:124586312458631246558696Dictyoglomus thermophilum H-6-12, complete genomehypothetical protein5e-1891.3
NC_009495:183767:205451205451206074624Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephosphoribosyl transferase7e-1891.3
NC_019978:2260395:227951322795132280253741Halobacteroides halobius DSM 5150, complete genomeputative amidophosphoribosyltransferase7e-1890.9
NC_007484:2392739:241602424160242416764741Nitrosococcus oceani ATCC 19707, complete genomecompetence protein F3e-1788.6
NC_017271:4410500:442881744288174429542726Xanthomonas campestris pv. raphani 756C chromosome, completecompetence protein F7e-1787.8
NC_010723:485874:507287507287507940654Clostridium botulinum E3 str. Alaska E43, complete genomecompetence protein F6e-1787.8
NC_003919:457482:459857459857460588732Xanthomonas axonopodis pv. citri str. 306, complete genomecompetence protein F8e-1787.4
NC_007086:459934:463478463478464209732Xanthomonas campestris pv. campestris str. 8004, complete genomecompetence protein F1e-1687
NC_010688:449649:450727450727451458732Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-1687
NC_003902:461808:462886462886463617732Xanthomonas campestris pv. campestris str. ATCC 33913, completecompetence protein F1e-1687
NC_011661:1411383:142613414261341426829696Dictyoglomus turgidum DSM 6724, complete genomehypothetical protein3e-1685.5
NC_015966:1661329:166348616634861664199714Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomephosphoribosyltransferase5e-1684.7
NC_013205:2610956:265020126502012650938738Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,ComF family protein1e-1584
NC_013173:3854368:385364638536463854371726Desulfomicrobium baculatum DSM 4028, complete genomeComF family protein2e-1582.8
NC_012914:6583000:660748166074816608365885Paenibacillus sp. JDR-2, complete genomeamidophosphoribosyltransferase-like protein2e-1479.7
NC_021182:4427468:442917244291724429849678Clostridium pasteurianum BC1, complete genomeputative amidophosphoribosyltransferase3e-1479
NC_014655:2874640:289247128924712893151681Leadbetterella byssophila DSM 17132 chromosome, complete genomephosphoribosyltransferase8e-1477.4
NC_010513:44886:564885648857213726Xylella fastidiosa M12 chromosome, complete genomecompetence protein F2e-1375.9
NC_014829:3877701:388788838878883888649762Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephosphoribosyltransferase3e-1375.9
NC_002488:45219:573285732858053726Xylella fastidiosa 9a5c, complete genomecompetence protein F3e-1375.9
NC_015389:481282:503799503799504569771Coriobacterium glomerans PW2 chromosome, complete genomehypothetical protein7e-1374.3
NC_006274:4940922:497343749734374974141705Bacillus cereus E33L, complete genomecomF operon protein 39e-1373.9
NC_013939:1902397:191778019177801918445666Deferribacter desulfuricans SSM1, complete genomehypothetical protein9e-1373.9
NC_009052:144619:162094162094162885792Shewanella baltica OS155, complete genomecompetence protein ComF1e-1273.6
NC_011567:2556915:256966825696682570336669Anoxybacillus flavithermus WK1, complete genomeCompetence protein FC2e-1273.2
NC_017243:517684:539377539377540108732Brachyspira intermedia PWS/A chromosome, complete genomephosphoribosyltransferace3e-1272
NC_016935:75186:989059890599672768Paenibacillus mucilaginosus 3016 chromosome, complete genomeComFC protein8e-1270.9
NC_015690:75223:988729887299639768Paenibacillus mucilaginosus KNP414 chromosome, complete genomeComFC1e-1170.5
NC_014150:2055907:207437720743772075114738Brachyspira murdochii DSM 12563 chromosome, complete genomephosphoribosyltransferase2e-1170.1
NC_005957:4904000:491711349171134917817705Bacillus thuringiensis serovar konkukian str. 97-27, completecomF operon protein 34e-1168.6
NC_006370:166000:182043182043182756714Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical ComF-related protein4e-1168.6
NC_016047:3599095:360043036004303601152723Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeComF operon protein 36e-1167.8
NC_015311:365007:372501372501373190690Prevotella denticola F0289 chromosome, complete genomecomF family protein1e-1067
NC_012659:4877410:491235449123544913058705Bacillus anthracis str. A0248, complete genomecomF operon protein 32e-1066.6
NC_005945:4898841:491366549136654914369705Bacillus anthracis str. Sterne, complete genomecomF operon protein 32e-1066.6
NC_008600:4898000:492877549287754929479705Bacillus thuringiensis str. Al Hakam, complete genomecomF operon protein 32e-1066.6
NC_012472:4908245:493904149390414939745705Bacillus cereus 03BB102, complete genomecomF operon protein 32e-1066.6
NC_014335:4848389:486194648619464862650705Bacillus cereus biovar anthracis str. CI chromosome, completeComF operon protein 32e-1066.2
NC_017195:3426000:344004334400433440765723Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeComF operon protein 32e-1065.9
NC_019896:577594:583185583185583874690Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeCompetence protein ComFC3e-1065.5
NC_014171:4959248:499668149966814997385705Bacillus thuringiensis BMB171 chromosome, complete genomeComF operon protein 34e-1065.5
NC_010184:4909183:494541749454174946121705Bacillus weihenstephanensis KBAB4, complete genomecomF operon protein 36e-1064.7
NC_016641:945284:958596958596959159564Paenibacillus terrae HPL-003 chromosome, complete genomeamidophosphoribosyltransferase8e-1064.3
NC_012581:4882525:491477749147774915349573Bacillus anthracis str. CDC 684 chromosome, complete genomecomF operon protein 31e-0963.5
NC_011773:4940921:497364749736474974219573Bacillus cereus AH820 chromosome, complete genomecomF operon protein 31e-0963.5
NC_007530:4877500:491245449124544913026573Bacillus anthracis str. 'Ames Ancestor', complete genomecomf operon protein 31e-0963.5
NC_003997:4876415:491232849123284912900573Bacillus anthracis str. Ames, complete genomecomF operon protein 31e-0963.5
NC_016779:4864056:489377448937744894286513Bacillus cereus F837/76 chromosome, complete genomeComF operon protein C2e-0963.2
NC_011725:5075285:510711351071135107685573Bacillus cereus B4264 chromosome, complete genomecompetence protein ComF4e-0962
NC_017208:5143500:515671651567165157288573Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecomF operon protein 35e-0961.6
NC_008786:1298817:132169913216991322154456Verminephrobacter eiseniae EF01-2, complete genome7e-0961.2
NC_013406:6568273:658940865894086590232825Paenibacillus sp. Y412MC10 chromosome, complete genomeamidophosphoribosyltransferase-like protein1e-0860.1
NC_015554:4824000:484485948448594845578720Alteromonas sp. SN2 chromosome, complete genomeComF2e-0859.3
NC_016751:1623756:163008516300851630702618Marinitoga piezophila KA3 chromosome, complete genomeamidophosphoribosyltransferase8e-0857.8
NC_019897:128610:172540172540173451912Thermobacillus composti KWC4 chromosome, complete genomeamidophosphoribosyltransferase6e-0857.8
NC_003909:4854379:488538548853854886089705Bacillus cereus ATCC 10987, complete genomecomF operon protein 31e-0757
NC_007350:2019623:202934420293442030015672Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,hypothetical protein2e-0756.2
NC_011658:4925346:493840249384024938974573Bacillus cereus AH187 chromosome, complete genomecomF operon protein 33e-0755.8
NC_011969:4841358:487321348732134873785573Bacillus cereus Q1 chromosome, complete genomecomf operon protein 33e-0755.8
NC_016771:4882886:489072548907254891297573Bacillus cereus NC7401, complete genomecomF operon protein 33e-0755.8
NC_011772:5021404:505355850535585054130573Bacillus cereus G9842, complete genomecomF operon protein 33e-0755.8
NC_010718:2385400:239948423994842400395912Natranaerobius thermophilus JW/NM-WN-LF, complete genomeamidophosphoribosyltransferase-like protein4e-0755.1
NC_008095:1401919:140647214064721406819348Myxococcus xanthus DK 1622, complete genomecompetence protein F, truncated5e-0755.1
NC_004193:2553630:257249025724902573167678Oceanobacillus iheyensis HTE831, complete genomelate competence protein6e-0754.7
NC_009659:3520093:352536235253623526015654Janthinobacterium sp. Marseille chromosome, complete genomeComf family protein2e-0652.8
NC_016010:1822212:1853493185349318547611269Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein2e-0652.8
NC_015760:343874:347728347728348390663Streptococcus salivarius CCHSS3, complete genomeputative amidophosphoribosyltransferase6e-0651.2
NC_014643:54500:712477124772071825Rothia dentocariosa ATCC 17931 chromosome, complete genomecompetence protein F8e-0650.8