Pre_GI Gene

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Host: NC_019897 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_019897:128610 Thermobacillus composti KWC4 chromosome, complete genome

Host Lineage: Thermobacillus composti; Thermobacillus; Paenibacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Isolation: composting reactor; Temp: Thermophile; Temp: 50C. Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) is an aerobic, rod-shaped, spore-forming and moderately thermophilic Gram-negative bacterium isolated from a fed-batch composting reactor.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1286101314682859alpha-mannosidaseQuickGO ontologyBLASTP
1314651330721608hypothetical proteinBLASTP
1332251342531029NADHflavin oxidoreductaseQuickGO ontologyBLASTP
134404134526123hypothetical protein
1345261360311506SNF family Na-dependent transporterQuickGO ontologyBLASTP
136173136499327lactoylglutathione lyase-like lyaseQuickGO ontologyBLASTP
1376261388161191arabinose efflux permease family proteinQuickGO ontologyBLASTP
138919139221303transcriptional regulatorQuickGO ontologyBLASTP
139257139826570hypothetical proteinBLASTP
140184140828645hypothetical protein
1414831428741392Retron-type reverse transcriptaseQuickGO ontologyBLASTP
14288314295371group II catalytic intronQuickGO ontology
143010143222213hypothetical protein
143726144049324growth inhibitorQuickGO ontologyBLASTP
144050144325276growth regulatorQuickGO ontologyBLASTP
144436144915480rRNA large subunit m3Psi methyltransferase RlmHQuickGO ontologyBLASTP
144922145389468transcriptional regulatorQuickGO ontologyBLASTP
145552146403852aldoketo reductase diketogulonate reductaseQuickGO ontologyBLASTP
14642014649071group II catalytic intronQuickGO ontology
1464991478901392Retron-type reverse transcriptaseQuickGO ontologyBLASTP
148357148524168hypothetical proteinBLASTP
1485981499471350trypsin-like serine protease with C-terminal PDZ domainQuickGO ontologyBLASTP
150150150407258hypothetical protein
150367151182816beta-lactamase superfamily metal-dependent hydrolaseQuickGO ontologyBLASTP
151264152037774hypothetical proteinBLASTP
1521991538361638hypothetical proteinBLASTP
1538331556771845PAS domain-containing proteinQuickGO ontologyBLASTP
155674156423750response regulator with CheY-like receiver domain and winged-helix DNA-binding domainQuickGO ontologyBLASTP
1565691581221554metalloendopeptidase-like membrane proteinQuickGO ontologyBLASTP
158292159074783hypothetical proteinBLASTP
1609221623911470transposase family proteinQuickGO ontologyBLASTP
1626001638711272S-layer proteinQuickGO ontologyBLASTP
1638761703886513CARDB domain-containing proteinQuickGO ontologyBLASTP
1704321725402109superfamily II DNARNA helicase required for DNA uptake late competence proteinQuickGO ontologyBLASTP
172540173451912amidophosphoribosyltransferaseQuickGO ontologyBLASTP
173629174045417flagellar operon proteinQuickGO ontologyBLASTP
174141174404264flagellar biosynthesis anti-sigma factor FlgMQuickGO ontologyBLASTP
174426174923498FlgN proteinQuickGO ontologyBLASTP
1749421764711530flagellar hook-associated protein FlgKQuickGO ontologyBLASTP
176492177400909flagellar hook-associated protein 3QuickGO ontologyBLASTP
177414177983570hypothetical proteinBLASTP
178074178511438hypothetical proteinBLASTP
178515178757243carbon storage regulator CsrAQuickGO ontologyBLASTP
178878179660783flagellinflagellar hook associated proteinQuickGO ontologyBLASTP
179807180208402flagellar protein FlaGQuickGO ontologyBLASTP
1802221817601539flagellar capping proteinQuickGO ontologyBLASTP
181778182164387flagellar biosynthetic protein FliSQuickGO ontologyBLASTP
1825611838141254hypothetical proteinBLASTP
1838111860752265hypothetical proteinBLASTP
1860931870941002nucleoside-diphosphate sugar epimeraseQuickGO ontologyBLASTP
187108187842735spore coat polysaccharide biosynthesis protein F CMP-KDO synthetaseQuickGO ontologyBLASTP
1878621889051044pseudaminic acid biosynthesis-associated protein PseGQuickGO ontologyBLASTP
188902189498597methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
1894951905501056pseudaminic acid synthaseQuickGO ontologyBLASTP
190585191532948nucleoside-diphosphate-sugar epimeraseQuickGO ontologyBLASTP
1915821927691188UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferaseQuickGO ontologyBLASTP
192914193114201cold shock proteinQuickGO ontologyBLASTP
193364193918555ribosomal subunit interface proteinQuickGO ontologyBLASTP
1940631965822520Preprotein translocase subunit SecAQuickGO ontologyBLASTP
197874198467594hypothetical proteinBLASTP
198526199116591transcriptional regulatorQuickGO ontologyBLASTP
199107199760654hypothetical proteinBLASTP
199757200659903multidrug ABC transporter ATPaseQuickGO ontologyBLASTP
2009082019571050N-acetyl-gamma-glutamyl-phosphate reductase common formQuickGO ontologyBLASTP