Pre_GI: BLASTP Hits

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Query: NC_016776:5174606:5211868 Bacteroides fragilis 638R, complete genome

Start: 5211868, End: 5212155, Length: 288

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:1265121:126695712669571267235279Porphyromonas gingivalis TDC60, complete genomeDNA-binding protein HU2e-21101
NC_002950:1334500:133467413346741334952279Porphyromonas gingivalis W83, complete genomeDNA-binding protein HU2e-21101
NC_016510:4343:102691026910577309Flavobacterium columnare ATCC 49512 chromosome, complete genomehistone-like DNA-binding protein HU-alpha2e-1787.8
NC_011565:469962:472770472770473078309Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,DNA-binding protein HU3e-1477
NC_015703:3842144:384191838419183842193276Runella slithyformis DSM 19594 chromosome, complete genomehistone family protein DNA-binding protein4e-1476.6
NC_009483:2201986:222274022227402223015276Geobacter uraniireducens Rf4 chromosome, complete genomehistone family protein DNA-binding protein1e-1065.1
NC_007930:50801:564885648856763276Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,DNA-binding protein HU3e-1063.9
NC_013166:1841446:185437918543791854681303Kangiella koreensis DSM 16069, complete genomeintegration host factor, alpha subunit3e-1063.9
NC_011898:2907017:292558029255802925855276Clostridium cellulolyticum H10, complete genomehistone family protein DNA-binding protein3e-1063.5
NC_000964:2146000:222453322245332224811279Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-1063.5
NC_016641:1639356:164996216499621650234273Paenibacillus terrae HPL-003 chromosome, complete genomeDNA-binding protein hu-alpha4e-1063.5
NC_014483:39729:512505125051522273Paenibacillus polymyxa E681 chromosome, complete genomeDNA-binding protein HU (DNA-binding protein II)4e-1063.5
NC_010723:173280:174948174948175226279Clostridium botulinum E3 str. Alaska E43, complete genomeDNA-binding protein HU1e-0961.6
NC_008609:1976403:201336020133602013644285Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein2e-0961.2
NC_007517:3430237:345142234514223451715294Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein2e-0960.8
NC_015499:119200:137696137696138016321Thermodesulfobium narugense DSM 14796 chromosome, complete genomehistone family protein DNA-binding protein3e-0960.5
NC_009483:3024115:304724230472423047520279Geobacter uraniireducens Rf4 chromosome, complete genomehistone family protein DNA-binding protein3e-0960.5
NC_008609:2446246:248416824841682484461294Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein3e-0960.5
NC_007645:2204066:221540322154032215675273Hahella chejuensis KCTC 2396, complete genomeBacterial nucleoid DNA-binding protein3e-0960.5
NC_017190:2130651:222540922254092225684276Bacillus amyloliquefaciens LL3 chromosome, complete genomeSPBc2 prophage-derived DNA-binding protein HU 23e-0960.5
NC_007645:4677965:469218546921854692487303Hahella chejuensis KCTC 2396, complete genomeintegration host factor, alpha subunit3e-0960.5
NC_008570:2216736:221933122193312219603273Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeDNA-binding protein HU-beta3e-0960.5
NC_002939:1634843:166893316689331669208276Geobacter sulfurreducens PCA, complete genomeintegration host factor, alpha subunit4e-0960.1
NC_018868:569423:616427616427616732306Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeintegration host factor subunit alpha4e-0960.1
NC_018691:3525430:356799135679913568293303Alcanivorax dieselolei B5 chromosome, complete genomeIntegration host factor subunit alpha6e-0959.7
NC_013939:1417750:143906514390651439358294Deferribacter desulfuricans SSM1, complete genomeintegration host factor, subunit beta9e-0958.9
NC_009437:1556934:156381915638191564106288Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehistone family protein DNA-binding protein9e-0958.9
NC_011725:1486635:149603414960341496306273Bacillus cereus B4264 chromosome, complete genomeDNA-binding protein HU1e-0858.5
NC_015571:411156:429426429426429692267Porphyromonas gingivalis TDC60, complete genomeDNA-binding protein HU1e-0858.2
NC_014152:191200:195060195060195332273Thermincola sp. JR, complete genomehistone family protein DNA-binding protein1e-0858.2
NC_011770:2499432:250353725035372503839303Pseudomonas aeruginosa LESB58, complete genomeintegration host factor, alpha subunit2e-0857.8
NC_002939:2337402:233912623391262339401276Geobacter sulfurreducens PCA, complete genomeintegration host factor, alpha subunit2e-0857.8
NC_002939:2315402:233912623391262339401276Geobacter sulfurreducens PCA, complete genomeintegration host factor, alpha subunit2e-0857.8
NC_008609:142471:182937182937183212276Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein2e-0857.8
NC_017506:1100679:110742411074241107726303Marinobacter adhaerens HP15 chromosome, complete genomeintegration host factor subunit alpha2e-0857.8
NC_007086:1988000:199247519924751992774300Xanthomonas campestris pv. campestris str. 8004, complete genomeintegration host factor alpha subunit4e-0857
NC_003902:2903493:291844529184452918744300Xanthomonas campestris pv. campestris str. ATCC 33913, completeintegration host factor subunit alpha4e-0857
NC_017271:2906000:292097929209792921278300Xanthomonas campestris pv. raphani 756C chromosome, completeintegration host factor subunit alpha4e-0857
NC_007517:1561466:158627615862761586551276Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein3e-0857
NC_008463:2467219:247385924738592474161303Pseudomonas aeruginosa UCBPP-PA14, complete genomeintegration host factor, alpha subunit3e-0857
NC_002516:3079850:309981030998103100112303Pseudomonas aeruginosa PAO1, complete genomeintegration host factor subunit alpha3e-0857
NC_009656:2512733:251937325193732519675303Pseudomonas aeruginosa PA7 chromosome, complete genomeintegration host factor subunit alpha3e-0857
NC_018080:2288700:229534022953402295642303Pseudomonas aeruginosa DK2 chromosome, complete genomeintegration host factor subunit alpha3e-0857
NC_011992:1234610:124592112459211246193273Acidovorax ebreus TPSY, complete genomehistone family protein DNA-binding protein5e-0856.6
NC_008782:2781229:279335227933522793624273Acidovorax sp. JS42, complete genomehistone family protein DNA-binding protein5e-0856.6
NC_014539:1839840:184259318425931842865273Burkholderia sp. CCGE1003 chromosome 1, complete sequencehistone family protein DNA-binding protein5e-0856.6
NC_016148:1175999:117808711780871178362276Thermovirga lienii DSM 17291 chromosome, complete genomehistone family protein DNA-binding protein4e-0856.6
NC_015422:1694363:171325817132581713530273Alicycliphilus denitrificans K601 chromosome, complete genomehistone family protein DNA-binding protein6e-0856.2
NC_014652:379833:398080398080398358279Caldicellulosiruptor hydrothermalis 108 chromosome, completehistone family protein DNA-binding protein6e-0856.2
NC_008781:2925818:294360729436072943921315Polaromonas naphthalenivorans CJ2, complete genomeintegration host factor, beta subunit6e-0856.2
NC_012034:2623252:263621926362192636497279Anaerocellum thermophilum DSM 6725, complete genomehistone family protein DNA-binding protein6e-0856.2
NC_014614:356746:394283394283394591309Clostridium sticklandii, complete genomeHU, DNA-binding transcriptional regulator, beta subunit6e-0856.2
NC_002947:2809591:281624728162472816549303Pseudomonas putida KT2440, complete genomeintegration host factor alpha subunit8e-0855.8
NC_009512:3618055:363133836313383631640303Pseudomonas putida F1, complete genomeintegration host factor, alpha subunit8e-0855.8
NC_009434:2577717:258467925846792584981303Pseudomonas stutzeri A1501, complete genomeintegration host factor subunit alpha7e-0855.8
NC_015740:2407500:244176324417632442065303Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegration host factor subunit alpha7e-0855.8
NC_012660:4558122:458470745847074585009303Pseudomonas fluorescens SBW25 chromosome, complete genomeintegration host factor subunit alpha1e-0755.5
NC_004129:2328491:233756823375682337870303Pseudomonas fluorescens Pf-5, complete genomeintegration host factor alpha subunit1e-0755.5
NC_007492:2203220:220711122071112207413303Pseudomonas fluorescens PfO-1, complete genomeIntegration host factor, alpha subunit1e-0755.5
NC_020291:117983:126830126830127105276Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA-binding protein HU1e-0755.5
NC_014623:4999032:500264050026405003044405Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeintegration host factor subunit alpha1e-0755.5
NC_012796:4075583:410928941092894109567279Desulfovibrio magneticus RS-1, complete genomeHU_IHF family transcriptional regulator1e-0755.5
NC_009257:1023696:104281710428171043089273Francisella tularensis subsp. tularensis WY96-3418 chromosome,DNA-binding protein HU-beta9e-0855.5
NC_008095:4189082:419269841926984193087390Myxococcus xanthus DK 1622, complete genomeintegration host factor, alpha subunit1e-0755.1
NC_008027:2051821:205420720542072054509303Pseudomonas entomophila L48, complete genomeintegration host factor (IHF), alpha subunit, DNA-binding protein, DNA replication1e-0755.1
NC_015383:368500:376195376195376473279Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequencehistone family protein DNA-binding protein2e-0754.7
NC_009380:4729340:473195847319584732233276Salinispora tropica CNB-440 chromosome, complete genomehistone family protein DNA-binding protein2e-0754.7
NC_009922:2850320:286144528614452861723279Alkaliphilus oremlandii OhILAs, complete genomehistone family protein DNA-binding protein2e-0754.3
NC_021150:1564229:156422915642291564507279Azotobacter vinelandii CA6, complete genomeintegration host factor subunit beta3e-0753.9
NC_009633:168266:184646184646184924279Alkaliphilus metalliredigens QYMF chromosome, complete genomehistone family protein DNA-binding protein3e-0753.9
NC_016631:5378810:539409553940955394448354Granulicella mallensis MP5ACTX8 chromosome, complete genomehistone family protein DNA-binding protein3e-0753.9
NC_007484:1975322:199732119973211997593273Nitrosococcus oceani ATCC 19707, complete genomeHistone-like DNA-binding protein3e-0753.9
NC_008601:1094041:111318411131841113456273Francisella tularensis subsp. novicida U112, complete genomeDNA-binding protein HU-beta3e-0753.9
NC_007298:1418500:144395014439501444291342Dechloromonas aromatica RCB, complete genomeIntegration host factor, alpha subunit3e-0753.9
NC_016629:3396500:342726034272603427532273Desulfovibrio africanus str. Walvis Bay chromosome, completehistone family protein DNA-binding protein3e-0753.5
NC_021150:2348214:236470423647042364976273Azotobacter vinelandii CA6, complete genomehistone-like DNA-binding protein4e-0753.5
NC_012560:2348202:236469223646922364964273Azotobacter vinelandii DJ, complete genomehistone-like bacterial DNA-binding protein4e-0753.5
NC_008344:669498:669498669498669770273Nitrosomonas eutropha C91, complete genomehistone family protein DNA-binding protein4e-0753.5
NC_002939:2844240:286990028699002870190291Geobacter sulfurreducens PCA, complete genomeDNA-binding protein HU5e-0753.1
NC_008027:1559083:156937315693731569669297Pseudomonas entomophila L48, complete genomeintegration host factor (IHF),beta subunit, site specific recombination5e-0753.1
NC_013446:1889500:189372218937221893994273Comamonas testosteroni CNB-2, complete genomehistone-like DNA-binding protein6e-0752.8
NC_002947:2589951:263308226330822633354273Pseudomonas putida KT2440, complete genomeDNA-binding protein HU-beta6e-0752.8
NC_007498:1666242:167333016733301673611282Pelobacter carbinolicus DSM 2380, complete genomeintegration host factor, alpha subunit6e-0752.8
NC_015589:2555000:256458325645832564867285Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehistone family protein DNA-binding protein7e-0752.8
NC_011833:31192:353093530935587279Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha7e-0752.8
NC_009439:2038303:204573520457352046022288Pseudomonas mendocina ymp, complete genomeintegration host factor subunit beta9e-0752.4
NC_015410:2144387:215171921517192152003285Pseudomonas mendocina NK-01 chromosome, complete genomeintegration host factor subunit beta9e-0752.4
NC_003909:3483244:350545735054573505729273Bacillus cereus ATCC 10987, complete genomeDNA-binding protein HU9e-0752.4
NC_011773:3547507:356972435697243569996273Bacillus cereus AH820 chromosome, complete genomeDNA-binding protein HU9e-0752.4
NC_014934:3809845:382531538253153825587273Cellulophaga algicola DSM 14237 chromosome, complete genomehistone family protein DNA-binding protein9e-0752.4
NC_011770:2046490:205485620548562055140285Pseudomonas aeruginosa LESB58, complete genomeintegration host factor beta subunit1e-0652
NC_008463:2017607:202597320259732026257285Pseudomonas aeruginosa UCBPP-PA14, complete genomeintegration host factor beta subunit1e-0652
NC_009656:1994392:200277320027732003057285Pseudomonas aeruginosa PA7 chromosome, complete genomeintegration host factor subunit beta1e-0652
NC_018080:1834754:184312018431201843404285Pseudomonas aeruginosa DK2 chromosome, complete genomeintegration host factor subunit beta1e-0652
NC_010995:2312901:231914623191462319418273Cellvibrio japonicus Ueda107, complete genomeDNA-binding protein HU superfamily1e-0652
NC_011834:31206:353233532335601279Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha2e-0651.6
NC_002528:31191:353083530835586279Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeDNA-binding protein hu-alpha2e-0651.6
NC_020209:997385:100490410049041005200297Pseudomonas poae RE*1-1-14, complete genomeintegration host factor subunit beta2e-0651.6
NC_007492:4563981:458471745847174585013297Pseudomonas fluorescens PfO-1, complete genomeIntegration host factor, beta subunit2e-0651.6
NC_012660:1804610:181322818132281813524297Pseudomonas fluorescens SBW25 chromosome, complete genomeintegration host factor subunit beta2e-0651.6
NC_015733:1555476:156068915606891560988300Pseudomonas putida S16 chromosome, complete genomeintegration host factor subunit beta2e-0651.6
NC_017252:31215:353313533135609279Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha2e-0651.6
NC_017253:31192:353093530935587279Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha2e-0651.6
NC_017254:31206:353233532335601279Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha2e-0651.6
NC_017255:31211:353283532835606279Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha2e-0651.6
NC_010322:1520973:152683615268361527132297Pseudomonas putida GB-1 chromosome, complete genomeintegration host factor subunit beta2e-0651.6
NC_015379:1887275:189486818948681895164297Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, unclassified1e-0651.6
NC_016830:1901488:190914419091441909440297Pseudomonas fluorescens F113 chromosome, complete genomeprotein IhfB1e-0651.6
NC_017256:30192:353573535735629273Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,DNA-binding protein HU-alpha1e-0651.6
NC_016632:1138000:115011011501101150394285Serratia symbiotica str. 'Cinara cedri' chromosome, completeintegration host factor beta-subunit2e-0651.2
NC_010544:671431:690915690915691199285Candidatus Phytoplasma australiense, complete genomeDNA-binding protein HU3e-0650.4
NC_002932:296557:307146307146307451306Chlorobium tepidum TLS, complete genomeDNA-binding protein HU-alpha, putative3e-0650.4
NC_012918:1174412:117713711771371177418282Geobacter sp. M21 chromosome, complete genomehistone family protein DNA-binding protein4e-0650.1
NC_011146:3720658:374570537457053745986282Geobacter bemidjiensis Bem, complete genomehistone family protein DNA-binding protein4e-0650.1
NC_008262:2649289:270117027011702701445276Clostridium perfringens SM101, complete genomeDNA-binding protein HU5e-0650.1
NC_017259:25400:347703477035042273Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,DNA-binding protein HU-alpha6e-0649.7
NC_012997:1446037:144955514495551449851297Teredinibacter turnerae T7901, complete genomeintegration host factor, beta subunit6e-0649.7