Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:2907017 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
290701729080721056twitching motility proteinQuickGO ontologyBLASTP
290813129098251695type II secretion system protein EQuickGO ontologyBLASTP
2910081291015676tRNA-AsnQuickGO ontology
291016229102771165S ribosomal RNAQuickGO ontologyBLASTP
29105282913440291323S ribosomal RNAQuickGO ontologyBLASTP
29141182915758164116S ribosomal RNAQuickGO ontologyBLASTP
29164262917082657Uracil-DNA glycosylase superfamilyQuickGO ontologyBLASTP
29170842917656573phage SPO1 DNA polymerase-related proteinQuickGO ontologyBLASTP
291791529198911977glycosyl transferase family 39QuickGO ontologyBLASTP
2920073292015785tRNA-TyrQuickGO ontologyBLASTP
2920161292023676tRNA-ThrQuickGO ontology
2920444292052077tRNA-AspQuickGO ontologyBLASTP
2920540292061475tRNA-GluQuickGO ontologyBLASTP
29208782921306429hypothetical proteinBLASTP
2921394292146976tRNA-LysQuickGO ontologyBLASTP
292162129228951275adenylosuccinate synthetaseQuickGO ontologyBLASTP
29231262923329204Domain of unknown function DUF1858QuickGO ontologyBLASTP
29234322923989558hydro-lyase Fe-S type tartratefumarate subfamily beta subunitQuickGO ontologyBLASTP
29240032924845843hydro-lyase Fe-S type tartratefumarate subfamily alpha subunitQuickGO ontologyBLASTP
29250692925452384UspA domain proteinQuickGO ontologyBLASTP
29255802925855276histone family protein DNA-binding proteinQuickGO ontologyBLASTP