Pre_GI: BLASTP Hits

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Query: NC_015259:485015:532878 Polymorphum gilvum SL003B-26A1 chromosome, complete genome

Start: 532878, End: 533531, Length: 654

Host Lineage: Polymorphum gilvum; Polymorphum; ; ; Proteobacteria; Bacteria

General Information: Polymorphum gilvum SL003B-26A1 is a type strain of a newly published novel species in the novel genus Polymorphum. It was isolated from a crude oil-polluted saline soil in Shengli Oilfield, China and could use the crude oil as the sole carbon source. Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. The complete genome sequence of Polymorphum gilvum SL003B-26A1 provides new strategies for bioremediation of oil contaminated environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015259:734795:739811739811740503693Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative N-acyl homoserine lactone transcriptional regulator, LuxR-like protein2e-70265
NC_015259:673662:679113679113679880768Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, LuxR family3e-58224
NC_020453:1025891:102750510275051028296792Agromonas oligotrophica S58 DNA, complete genomehypothetical protein2e-26118
NC_014394:1594071:159742715974271598158732Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, LuxR family1e-25116
NC_015675:6538500:655225765522576553003747Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator2e-2099
NC_014923:5970182:599758959975895998335747Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein2e-2099
NC_019973:5899142:592654659265465927292747Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain2e-2099
NC_010676:304405:325754325754326458705Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LuxR family7e-2097.1
NC_016027:194842:203812203812204525714Gluconacetobacter xylinus NBRC 3288, complete genomeN-acylhomoserine lactone-dependent regulatory protein2e-1995.5
NC_019973:5650646:568189956818995682624726Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain3e-1995.1
NC_015675:6276357:630761063076106308335726Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator3e-1995.1
NC_014834:614890:624618624618625346729Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein7e-1994
NC_007761:3047321:304927530492753050057783Rhizobium etli CFN 42, complete genomeautoinducer transcriptional regulator protein2e-1892.8
NC_015637:325561:342547342547343269723Vibrio anguillarum 775 chromosome chromosome II, complete sequenceLuxR family transcriptional regulator2e-1892.8
NC_005773:1851116:187462718746271875328702Pseudomonas syringae pv. phaseolicola 1448A, complete genomeautoinducer transcriptional regulator AhlR3e-1891.7
NC_004463:1992000:203431920343192035080762Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein2e-1789.4
NC_014923:5868000:587372958737295874466738Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein1e-1686.7
NC_019973:5797000:580268958026895803426738Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain1e-1686.7
NC_015675:6423000:642840064284006429137738Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator1e-1686.7
NC_010125:2884762:293002229300222930741720Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, luxR family2e-1685.9
NC_015567:2125415:213304521330452133749705Serratia sp. AS9 chromosome, complete genomeregulatory protein LuxR8e-1684
NC_015566:2125403:213303321330332133737705Serratia sp. AS12 chromosome, complete genomeregulatory protein LuxR8e-1684
NC_015567:69190:867278672787458732Serratia sp. AS9 chromosome, complete genomeLuxR family transcriptional regulator9e-1683.6
NC_015566:69190:867278672787458732Serratia sp. AS12 chromosome, complete genomeLuxR family transcriptional regulator9e-1683.6
NC_012779:2755338:276783827678382768557720Edwardsiella ictaluri 93-146, complete genomeAHL-dependent transcriptional regulator2e-1582.4
NC_004088:1909880:191632619163261917063738Yersinia pestis KIM, complete genometranscriptional activator protein3e-1582
NC_008150:2173708:218657821865782187315738Yersinia pestis Antiqua, complete genomequorum-sensing transcriptional activator YpeR3e-1582
NC_003143:2741478:275476827547682755505738Yersinia pestis CO92, complete genomequorum-sensing transcriptional activator YpeR3e-1582
NC_005810:2508671:252469225246922525429738Yersinia pestis biovar Microtus str. 91001, complete genomequorum-sensing transcriptional activator YpeR3e-1582
NC_017168:2999514:300692830069283007665738Yersinia pestis A1122 chromosome, complete genomequorum-sensing transcriptional activator YpeR3e-1582
NC_008391:2045348:205893020589302059619690Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LuxR family3e-1582
NC_009381:588137:594691594691595434744Yersinia pestis Pestoides F chromosome, complete genomequorum-sensing transcriptional regulator4e-1581.6
NC_010682:460523:492274492274493035762Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, LuxR family4e-1581.3
NC_010159:172469:193682193682194425744Yersinia pestis Angola, complete genometranscriptional regulator, LuxR family7e-1580.9
NC_006155:3805640:383807438380743838817744Yersinia pseudotuberculosis IP 32953, complete genomeQuorum-sensing transcriptional regulator7e-1580.9
NC_003143:1059580:109199410919941092737744Yersinia pestis CO92, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_005810:3917254:392651139265113927254744Yersinia pestis biovar Microtus str. 91001, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_010465:893921:900476900476901219744Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LuxR family7e-1580.9
NC_008149:3556999:358796835879683588711744Yersinia pestis Nepal516, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_010634:3720214:375114637511463751889744Yersinia pseudotuberculosis PB1/+, complete genomeLuxR family transcriptional regulator7e-1580.9
NC_008150:317903:325409325409326152744Yersinia pestis Antiqua, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_004088:3689000:372009637200963720839744Yersinia pestis KIM, complete genometranscriptional activator7e-1580.9
NC_017265:809943:816515816515817258744Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,quorum-sensing transcriptional regulator7e-1580.9
NC_017168:3286:125371253713280744Yersinia pestis A1122 chromosome, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_017160:905783:912355912355913098744Yersinia pestis D182038 chromosome, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_017154:902739:910246910246910989744Yersinia pestis D106004 chromosome, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_014029:961522:968094968094968837744Yersinia pestis Z176003 chromosome, complete genomequorum-sensing transcriptional regulator7e-1580.9
NC_009708:874770:881339881339882082744Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLuxR family transcriptional regulator7e-1580.9
NC_014259:3984568:400097840009784001694717Acinetobacter sp. DR1 chromosome, complete genomeTranscriptional activator protein phzR4e-1478.2
NC_016603:3259432:326063032606303261346717Acinetobacter calcoaceticus PHEA-2 chromosome, complete genometranscriptional activator of quorum sensing autoinducer synthesis transcription regulator protein4e-1477.8
NC_010611:154307:155484155484156200717Acinetobacter baumannii ACICU, complete genomeDNA-binding HTH domain-containing protein6e-1477.4
NC_010410:3777076:379324937932493793965717Acinetobacter baumannii AYE, complete genomeputative Autoinducer-binding transcriptional regulator (LuxR family)1e-1376.6
NC_011586:164746:165921165921166637717Acinetobacter baumannii AB0057 chromosome, complete genomeeR transcriptional regulator1e-1376.6
NC_011595:3607402:362357536235753624291717Acinetobacter baumannii AB307-0294, complete genometranscriptional activator protein phzR1e-1376.6
NC_017171:155836:157012157012157728717Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeautoinducer-binding transcriptional regulator1e-1376.6
NC_017387:147906:149082149082149798717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeautoinducer-binding transcriptional regulator1e-1376.6
NC_014258:127500:136873136873137565693Pantoea vagans C9-1 plasmid pPag3, complete sequencetranscriptional activator protein PagR2e-1375.9
NC_014310:845527:862340862340863056717Ralstonia solanacearum PSI07 megaplasmid, complete sequenceLuxR family transcriptional regulator2e-1375.9
NC_014618:2139639:215415321541532154866714Enterobacter cloacae SCF1 chromosome, complete genomeLuxR family transcriptional regulator2e-1375.5
NC_014500:4691915:471160847116084712360753Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional regulatory protein ExpR3e-1375.5
NC_010515:2691000:271900327190032719722720Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LuxR family3e-1375.1
NC_007511:1147696:117772911777291178448720Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LuxR family5e-1374.7
NC_012880:135508:146864146864147574711Dickeya dadantii Ech703, complete genometranscriptional regulator, LuxR family4e-1374.7
NC_011001:2085986:208673720867372087456720Burkholderia cenocepacia J2315 chromosome 2, complete sequenceN-acylhomoserine lactone dependent regulatory protein CepR4e-1374.7
NC_003296:941920:978998978998979744747Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTIONAL ACTIVATOR OF QUORUM SENSING AUTOINDUCER SYNTHESIS TRANSCRIPTION REGULATOR PROTEIN5e-1374.3
NC_017249:8221992:822574082257408226213474Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator1e-1273.6
NC_009085:131000:132302132302132898597Acinetobacter baumannii ATCC 17978, complete genomeeR transcriptional regulator3e-1272
NC_014923:2672000:267549126754912676213723Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeAutoinducer-binding domain protein4e-1271.6
NC_015675:2839000:284249128424912843213723Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLuxR family transcriptional regulator4e-1271.6
NC_019973:2744000:274754427475442748266723Mesorhizobium australicum WSM2073, complete genomeDNA-binding protein with HTH domain4e-1271.6
NC_013716:3109700:312693731269373127629693Citrobacter rodentium ICC168, complete genomequorum sensing transcriptional regulator CroR5e-1271.2
NC_011894:983572:101237610123761013104729Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LuxR family5e-1270.9
NC_016818:2836851:285495428549542855640687Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeDNA-binding protein2e-1168.9
NC_010172:5036385:503965450396545040385732Methylobacterium extorquens PA1, complete genomeAutoinducer-binding domain protein2e-1168.9
NC_012856:2633890:265554826555482656153606Ralstonia pickettii 12D chromosome 1, complete genometwo component transcriptional regulator, LuxR family3e-1168.6
NC_007778:3784104:379951837995183800240723Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LuxR family5e-1167.8
NC_011004:2507566:251411225141122514834723Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, LuxR family5e-1167.8
NC_010557:207846:211136211136211855720Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LuxR family5e-1167.8
NC_007958:2423335:242646424264642427186723Rhodopseudomonas palustris BisB5, complete genomeregulatory protein, LuxR6e-1167.4
NC_009254:329700:339382339382340164783Burkholderia vietnamiensis G4 chromosome 3, complete sequenceresponse regulator receiver protein8e-1167
NC_012988:5516872:552180955218095522306498Methylobacterium extorquens DM4, complete genomeN-acylhomoserine lactone LuxR family transcriptional regulator1e-1066.6
NC_010682:3033646:306006730600673060672606Ralstonia pickettii 12J chromosome 1, complete sequencetwo component transcriptional regulator, LuxR family1e-1066.2
NC_014837:1570500:157253015725301573252723Pantoea sp. At-9b chromosome, complete genomeLuxR family transcriptional regulator3e-1065.5
NC_010514:6000:278042780428550747Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, completetranscriptional regulator, LuxR family4e-1064.7
NC_011146:896000:914063914063914383321Geobacter bemidjiensis Bem, complete genome5e-1064.3
NC_014834:2206119:223396822339682234687720Rhodopseudomonas palustris DX-1 chromosome, complete genomeautoinducer-binding domain-containing protein6e-1064.3
NC_016514:2950860:295410229541022954824723Enterobacter cloacae EcWSU1 chromosome, complete genomeregulatory protein SdiA1e-0963.5
NC_020453:6821500:683645968364596837193735Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LuxR family3e-0961.6
NC_016830:5109953:511633851163385116613276Pseudomonas fluorescens F113 chromosome, complete genomeprotein LasR5e-0961.2
NC_009485:1604942:163120516312051631810606Bradyrhizobium sp. BTAi1 chromosome, complete genomeLuxR transcriptional regulator6e-0960.8
NC_014817:29795:536405364054386747Asticcacaulis excentricus CB 48 chromosome 2, complete sequencetranscriptional regulator, luxr family2e-0859.7
NC_011979:2641500:265821026582102658956747Geobacter sp. FRC-32, complete genometranscriptional regulator, LuxR family2e-0859.3
NC_010681:121647:144448144448145068621Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, LuxR family2e-0858.9
NC_015580:3834244:383854938385493839346798Novosphingobium sp. PP1Y, complete genomeregulatory protein LuxR3e-0858.5
NC_009436:2685910:270101327010132701735723Enterobacter sp. 638, complete genomeDNA-binding transcriptional activator SdiA4e-0858.5
NC_011982:206784:225258225258225950693Agrobacterium vitis S4 plasmid pTiS4, complete sequencetranscriptional regulator4e-0858.2
NC_014838:589581:598794598794599525732Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LuxR family5e-0857.8
NC_009523:585367:6023956023956038101416Roseiflexus sp. RS-1 chromosome, complete genomeresponse regulator receiver protein7e-0857.4
NC_016816:2953530:298349529834952984217723Pantoea ananatis LMG 5342, complete genometranscriptional activator protein PhzR1e-0756.6
NC_012724:2547500:255223325522332552964732Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, LuxR family protein1e-0756.6
NC_010505:4990472:501816850181685018758591Methylobacterium radiotolerans JCM 2831, complete genometwo component transcriptional regulator, LuxR family1e-0756.6
NC_011420:3822765:3835639383563938383622724Rhodospirillum centenum SW, complete genometranscriptional regulator, LuxR family protein3e-0755.1
NC_007907:5185510:524467952446795245317639Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0754.7
NC_011830:1288984:130235713023571302995639Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LuxR family5e-0754.7
NC_009832:110239:126205126205126522318Serratia proteamaculans 568, complete genometranscriptional regulator, LuxR family4e-0754.7
NC_013446:2961647:296590429659042966623720Comamonas testosteroni CNB-2, complete genometranscriptional regulator, luxR family6e-0754.3
NC_010506:2441944:244888424488842449501618Shewanella woodyi ATCC 51908, complete genomeATP-dependent transcriptional regulator, MalT-like, LuxR family8e-0753.9
NC_016027:2580477:258117025811702581910741Gluconacetobacter xylinus NBRC 3288, complete genomeLuxR family transcriptional regulator1e-0653.5
NC_014215:1929000:193663719366371937302666Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Two-component system response regulator1e-0653.1