Pre_GI: BLASTP Hits

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Query: NC_014328:773095:785936 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 785936, End: 787324, Length: 1389

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011837:830436:8416928416928430921401Clostridium kluyveri NBRC 12016, complete genomehypothetical protein0745
NC_009706:830461:8417448417448431171374Clostridium kluyveri DSM 555 chromosome, complete genomeFe-Fe hydrogenase 20741
NC_013315:3689422:3708153370815337095291377Clostridium difficile CD196 chromosome, complete genomehydrogenase5e-169594
NC_013385:1758383:1778719177871917804701752Ammonifex degensii KC4, complete genomehydrogenase, Fe-only2e-110399
NC_016627:1485799:1518304151830415200791776Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase, Fe-only2e-107390
NC_013385:1758383:1776695177669517784311737Ammonifex degensii KC4, complete genomehydrogenase, Fe-only2e-107389
NC_019978:2260395:2284480228448022862071728Halobacteroides halobius DSM 5150, complete genomehydrogenase, Fe-only8e-99361
NC_020291:2701149:2703814270381427051871374Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome[FeFe] hydrogenase, group A7e-96351
NC_008261:2920999:2926027292602729277451719Clostridium perfringens ATCC 13124, complete genomeiron hydrogenase2e-94346
NC_016012:879972:8821658821658839011737Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeiron hydrogenase2e-91336
NC_004663:107019:1132011132011149671767Bacteroides thetaiotaomicron VPI-5482, complete genomeNADH:ubiquinone oxidoreductase subunit2e-89330
NC_012778:207415:2259602259602276421683Eubacterium eligens ATCC 27750, complete genomeNADH dehydrogenase I chain G2e-85316
NC_014377:532816:5487185487185504181701Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNAD(P)-dependent iron-only hydrogenase catalytic subunit2e-81303
NC_007519:64157:7582175821770861266Desulfovibrio alaskensis G20 chromosome, complete genomeferredoxin hydrogenase7e-81301
NC_010334:1701957:1701957170195717031891233Shewanella halifaxensis HAW-EB4, complete genomehydrogenase, Fe-only5e-79295
NC_010001:109893:1154371154371171401704Clostridium phytofermentans ISDg, complete genomehydrogenase, Fe-only9e-76284
NC_015519:2605709:2613464261346426154431980Tepidanaerobacter sp. Re1 chromosome, complete genomehydrogenase, Fe-only2e-72273
NC_016048:1602500:1603093160309316047871695Oscillibacter valericigenes Sjm18-20, complete genomeputative uptake hydrogenase subunit HupA7e-72271
NC_013740:2141523:2158428215842821601581731Acidaminococcus fermentans DSM 20731, complete genomehydrogenase, Fe-only2e-71270
NC_011830:2177187:2194046219404621974983453Desulfitobacterium hafniense DCB-2, complete genomehydrogenase, Fe-only1e-67257
NC_015737:53682:719287192872386459Clostridium sp. SY8519, complete genomehypothetical protein2e-29130
NC_019978:7535:2927929279309671689Halobacteroides halobius DSM 5150, complete genomeiron only hydrogenase large subunit1e-22107
NC_010723:371741:3830613830613845451485Clostridium botulinum E3 str. Alaska E43, complete genomeiron-dependent hydrogenase1e-22107
NC_010674:370629:3876673876673891511485Clostridium botulinum B str. Eklund 17B, complete genomeiron-dependent hydrogenase3e-22107
NC_004557:2552418:2556219255621925577031485Clostridium tetani E88, complete genomeperiplasmic [Fe] hydrogenase 13e-21103
NC_013203:472679:4744474744474760421596Atopobium parvulum DSM 20469, complete genomeFerredoxin hydrogenase7e-21102
NC_006138:2683545:2717282271728227187331452Desulfotalea psychrophila LSv54, complete genomesimilar to hydrogenase9e-21101
NC_010644:485966:5097615097615111971437Elusimicrobium minutum Pei191, complete genomehydrogenase large subunit4e-2099.8
NC_015958:1983815:2002191200219120037321542Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase large subunit domain-containing protein9e-2098.6
NC_014824:133065:1464801464801479161437Ruminococcus albus 7 plasmid pRUMAL01, complete sequencehydrogenase large subunit domain protein1e-1998.2
NC_010520:3580000:3589336358933635908291494Clostridium botulinum A3 str. Loch Maree, complete genome[Fe] hydrogenase4e-1996.3
NC_010516:3845942:3867259386725938686081350Clostridium botulinum B1 str. Okra, complete genome[Fe] hydrogenase1e-1895.1
NC_009697:3463736:3488121348812134896141494Clostridium botulinum A str. ATCC 19397 chromosome, complete[Fe] hydrogenase1e-1894.7
NC_017297:3594000:3604382360438236058751494Clostridium botulinum F str. 230613 chromosome, complete genome[Fe] hydrogenase1e-1894.7
NC_009699:3581376:3605767360576736072601494Clostridium botulinum F str. Langeland chromosome, complete genome[Fe] hydrogenase1e-1894.7
NC_009495:3502000:3512133351213335136291497Clostridium botulinum A str. ATCC 3502 chromosome, complete genome[Fe] hydrogenase1e-1894.7
NC_009698:3647955:3669220366922036705691350Clostridium botulinum A str. Hall chromosome, complete genome[Fe] hydrogenase2e-1894
NC_015389:1298689:1320798132079813223511554Coriobacterium glomerans PW2 chromosome, complete genomehydrogenase large subunit domain protein3e-1893.6
NC_008593:2136759:2146548214654821480321485Clostridium novyi NT, complete genomeFe-hydrogenase large subunit family protein5e-1892.8
NC_010001:109893:1200331200331214871455Clostridium phytofermentans ISDg, complete genomeFerredoxin hydrogenase6e-1892.4
NC_007907:960104:9669189669189681951278Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1789.7
NC_015425:2389400:2403109240310924045931485Clostridium botulinum BKT015925 chromosome, complete genomeFe-hydrogenase large subunit family protein7e-1789
NC_012563:3729817:3754207375420737557001494Clostridium botulinum A2 str. Kyoto, complete genome[Fe] hydrogenase2e-1687.8
NC_020291:491000:5095775095775110641488Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeferredoxin hydrogenase2e-1687.4
NC_009617:385000:3941173941173956071491Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeferredoxin hydrogenase2e-1687.4
NC_010424:448865:4541674541674556241458Candidatus Desulforudis audaxviator MP104C, complete genomehydrogenase large subunit domain protein4e-1686.7
NC_014328:2203437:2203437220343722047831347Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Iron only hydrogenase large subunit1e-1585.1
NC_016627:1485799:1512139151213915134731335Clostridium clariflavum DSM 19732 chromosome, complete genomeiron only hydrogenase large subunit7e-1582.4
NC_020134:2832857:2836197283619728375851389Clostridium stercorarium subsp. stercorarium DSM 8532, completehydrogenase large subunit domain protein1e-1481.3
NC_014328:2203437:2216007221600722179231917Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator1e-1378.6
NC_010321:244371:2530382530382547711734Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehydrogenase9e-1478.6
NC_010320:671699:6831316831316848731743Thermoanaerobacter sp. X514 chromosome, complete genomeputative PAS/PAC sensor protein9e-1478.6
NC_015949:2327500:2327610232761023294811872Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomemethyl-accepting chemotaxis sensory transducer1e-1378.2
NC_015425:2072703:2098141209814121000301890Clostridium botulinum BKT015925 chromosome, complete genometranscriptional regulator1e-1377.8
NC_007503:1383255:1383255138325513854532199Carboxydothermus hydrogenoformans Z-2901, complete genomesigma-54 dependent transcriptional regulator2e-1377.8
NC_016584:3826300:3826300382630038291252826Desulfosporosinus orientis DSM 765 chromosome, complete genomesignal transduction histidine kinase6e-1375.9
NC_015578:1038588:1043196104319610449471752Treponema primitia ZAS-2 chromosome, complete genomeferredoxin 21e-1274.7
NC_014364:3500041:3519450351945035209641515Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehydrogenase large subunit domain protein3e-1273.6
NC_015577:3735558:3735558373555837376452088Treponema azotonutricium ZAS-9 chromosome, complete genome4Fe-4S binding domain-containing protein2e-1171.2
NC_015589:2555000:2555101255510125568131713Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePAS fold domain-containing protein6e-1169.3
NC_008262:297960:3212573212573226061350Clostridium perfringens SM101, complete genomeHydrogenase subunit (ferredoxin)5e-1169.3
NC_008261:304000:3265183265183278671350Clostridium perfringens ATCC 13124, complete genome[Fe] hydrogenase4e-1066.6
NC_018870:427357:4339954339954357491755Thermacetogenium phaeum DSM 12270 chromosome, complete genomeNADH-quinone oxidoreductase 51 kDa subunit F6e-1065.9
NC_014973:3290545:3290545329054532923951851Geobacter sp. M18 chromosome, complete genomeNADH dehydrogenase (quinone)8e-0962.4
NC_010334:1701957:170320417032041703524321Shewanella halifaxensis HAW-EB4, complete genomeiron hydrogenase small subunit8e-0962
NC_014377:532816:5468405468405487171878Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNADH dehydrogenase (quinone)4e-0859.7
NC_014011:1264165:128735912873591288021663Aminobacterium colombiense DSM 12261 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein1e-0758.5
NC_010001:109893:1171581171581190441887Clostridium phytofermentans ISDg, complete genomeNADH dehydrogenase (quinone)4e-0756.6
NC_014328:773095:7827417827417845401800Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeNADH dehydrogenase I subunit F4e-0756.6
NC_004663:107019:1149791149791168861908Bacteroides thetaiotaomicron VPI-5482, complete genomeNADH:ubiquinone oxidoreductase subunit3e-0756.6
NC_015589:3053504:3072966307296630749181953Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeNADH dehydrogenase (quinone)5e-0756.2
NC_009922:315870:3255043255043272521749Alkaliphilus oremlandii OhILAs, complete genomeNADH dehydrogenase (quinone)8e-0755.5
NC_016048:1602500:1604790160479016066791890Oscillibacter valericigenes Sjm18-20, complete genomeputative uptake hydrogenase subunit HupB1e-0654.7
NC_019978:2260395:2286283228628322880851803Halobacteroides halobius DSM 5150, complete genomeNADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit2e-0654.3
NC_014002:1173561:1186573118657311876821110Methanohalophilus mahii DSM 5219 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0653.9
NC_009437:685214:6885706885706903241755Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeNADH dehydrogenase (quinone)4e-0653.5
NC_014365:3123853:3140717314071731426331917Desulfarculus baarsii DSM 2075 chromosome, complete genomeNADH dehydrogenase (quinone)8e-0652.4
NC_015216:2548057:2563084256308425649431860Methanobacterium sp. AL-21 chromosome, complete genomeNADH dehydrogenase (quinone)8e-0652
NC_013887:245236:275858275858276640783Methanocaldococcus sp. FS406-22 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein9e-0652