Pre_GI: BLASTP Hits

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Query: NC_014006:2932959:2935029 Sphingobium japonicum UT26S chromosome 1, complete genome

Start: 2935029, End: 2936066, Length: 1038

Host Lineage: Sphingobium japonicum; Sphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Sphingobium japonicum (strain NBRC 101211 / UT26S) is a yellow-pigmented, non-motile, aerobic, hexachlorocyclohexane (HCH)-degrading Gram-negative bacterium isolated from a dumpsite in the vicinity of an industry that has been producing lindane. HCH has been used extensively as insect control agents in the health and agriculture fields. Sphingobium japonicum, formerly Sphingomonas paucimobilis, is able to degrade hexachlorocyclohexane which has been used extensively as insect control agents in the health and agriculture fields.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015593:2841856:2849928284992828509651038Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein4e-165580
NC_014006:2932959:294086529408652941296432Sphingobium japonicum UT26S chromosome 1, complete genomeputative integrase1e-64247
NC_014006:2932959:293965229396522939894243Sphingobium japonicum UT26S chromosome 1, complete genomeputative integrase2e-37156
NC_011989:594353:6107606107606117911032Agrobacterium vitis S4 chromosome 1, complete sequenceIntegrase1e-32140
NC_016812:258500:2644322644322655201089Sinorhizobium fredii HH103, complete genomehypothetical protein8e-24111
NC_015388:1020747:102930310293031030148846Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeintegrase family protein1e-22107
NC_015731:2148517:2150716215071621518041089Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein3e-21102
NC_008258:269806:2774612774612786211161Shigella flexneri 5 str. 8401, complete genomeputative integrase1e-1997.8
NC_017328:303987:3104213104213115811161Shigella flexneri 2002017 chromosome, complete genomephage integrase family site-specific recombinase1e-1997.8
NC_009800:289000:2918312918312929911161Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family9e-2097.8
NC_012751:1538500:1538746153874615398911146Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeAPSE-2 prophage; integrase9e-2097.8
NC_020418:2084937:2084937208493720860881152Morganella morganii subsp. morganii KT, complete genomePhage integrase2e-1894
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein3e-1892.8
NC_011751:643976:6449436449436461061164Escherichia coli UMN026 chromosome, complete genomeputative integrase; DLP12 prophage1e-1790.9
NC_000913:558920:5640385640385652011164Escherichia coli K12, complete genomeDLP12 prophage; predicted integrase1e-1790.9
NC_010473:498252:5033705033705045331164Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted integrase1e-1790.9
AC_000091:558920:5640385640385652011164Escherichia coli W3110 DNA, complete genomepredicted integrase1e-1790.9
NC_012759:461680:4667984667984679611164Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative integrase1e-1790.9
NC_011415:600375:6083326083326094951164Escherichia coli SE11 chromosome, complete genomephage integrase1e-1790.9
NC_012947:3231893:3247313324731332484761164Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase1e-1790.9
NC_012967:531000:5369295369295380921164Escherichia coli B str. REL606 chromosome, complete genomeputative integrase1e-1790.9
NC_007759:2179000:2183062218306221841561095Syntrophus aciditrophicus SB, complete genomephage integrase family protein4e-1789
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase4e-1789
NC_011283:4212000:4229167422916742303301164Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase1e-1687.8
NC_011094:593100:6007016007016018641164Salmonella enterica subsp. enterica serovar Schwarzengrund strprophage DLP12 integrase2e-1687.4
NC_016845:1285435:1288374128837412895371164Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,site-specific recombinase, phage integrase family1e-1687.4
NC_013282:1200993:1204148120414812053111164Cronobacter turicensis, complete genomeProphage DLP12 integrase2e-1686.7
NC_006350:3957454:396679739667973967651855Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage integrase2e-1686.7
NC_016631:4113794:4148964414896441500041041Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein3e-1686.3
NC_016809:389561:4020064020064030491044Haemophilus influenzae 10810, complete genomeDLP12 prophage integrase3e-1685.9
NC_015064:2341152:2360406236040623614641059Acidobacterium sp. MP5ACTX9 chromosome, complete genomeintegrase family protein7e-1685.1
NC_014922:825396:8292718292718302961026Haemophilus influenzae F3047 chromosome, complete genomeProphage integrase9e-1684.7
NC_011205:609464:6170646170646182271164Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853prophage DLP12 integrase1e-1584
NC_012214:2805297:282140528214052822034630Erwinia pyrifoliae Ep1/96, complete genomephage integrase family, fragment2e-1583.6
NC_009567:904922:924429924429925310882Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein3e-1583.2
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase3e-1582.8
NC_014355:243543:2579012579012590221122Candidatus Nitrospira defluvii, complete genomephage integrase8e-1581.6
NC_009076:3876733:388817438881743888692519Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-1480.1
NC_008702:2039462:2046178204617820472541077Azoarcus sp. BH72, complete genomesite-specific recombinase, phage integrase family3e-1479.3
NC_005139:1784000:1822239182223918234471209Vibrio vulnificus YJ016 chromosome I, complete sequenceintegrase7e-1478.6
NC_004459:2443000:2501649250164925028571209Vibrio vulnificus CMCP6 chromosome I, complete sequenceIntegrase1e-1377.8
NC_008609:3921113:3938275393827539394831209Pelobacter propionicus DSM 2379, complete genomephage integrase family protein1e-1377.4
NC_020418:3133831:3146831314683131479941164Morganella morganii subsp. morganii KT, complete genomeintegrase3e-1376.3
NC_006905:368942:3728473728473740101164Salmonella enterica subsp. enterica serovar Choleraesuis strInt4e-1375.9
NC_011083:374000:3768503768503780131164Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,site-specific recombinase, phage integrase family5e-1375.5
NC_016860:364981:3688873688873700501164Salmonella enterica subsp. enterica serovar Typhimurium strintegrase7e-1375.1
NC_004741:310382:3138433138433150061164Shigella flexneri 2a str. 2457T, complete genomeputative phage integrase9e-1374.7
NC_004337:309833:3269163269163280791164Shigella flexneri 2a str. 301, complete genomeputative phage integrase1e-1274.7
NC_004741:310382:3260603260603272231164Shigella flexneri 2a str. 2457T, complete genomeputative phage integrase1e-1274.7
NC_015259:673662:7011397011397022691131Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein4e-1272.8
NC_007298:1129889:1137870113787011388861017Dechloromonas aromatica RCB, complete genomePhage integrase3e-1272.8
NC_007520:903799:9043479043479053721026Thiomicrospira crunogena XCL-2, complete genomePhage integrase4e-1272.4
NC_010814:1441327:1473385147338514746501266Geobacter lovleyi SZ, complete genomeintegrase family protein1e-1170.9
NC_014562:469154:475073475073475705633Pantoea vagans C9-1 chromosome, complete genomeTyrosine recombinase xerD1e-1170.9
NC_007651:3719191:373247537324753732954480Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-1170.5
NC_004741:310382:324316324316324609294Shigella flexneri 2a str. 2457T, complete genomeintegrase fragment2e-1170.1
NC_004337:309833:317312317312317605294Shigella flexneri 2a str. 301, complete genomeintegrase2e-1170.1
NC_008825:564392:5822395822395832431005Methylibium petroleiphilum PM1, complete genomehypothetical protein7e-1168.6
NC_013456:1843000:1843625184362518448301206Vibrio sp. Ex25 chromosome 1, complete genomeintegrase6e-1168.6
NC_015731:3274739:3293661329366132946981038Nitrosomonas sp. Is79A3 chromosome, complete genomeintegrase family protein8e-1168.2
NC_014306:1286248:129230312923031293148846Erwinia billingiae Eb661, complete genomesimilar to prophage integrase1e-1067.8
NC_007575:1694877:1714292171429217153981107Sulfurimonas denitrificans DSM 1251, complete genomePhage integrase2e-1067.4
NC_009656:5505413:552934455293445530342999Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase2e-1067
NC_015566:1206500:121002012100201210430411Serratia sp. AS12 chromosome, complete genome2e-1067
NC_015567:1206727:121020512102051210615411Serratia sp. AS9 chromosome, complete genome2e-1067
NC_018678:87064:9596595965970681104Alteromonas macleodii str. 'English Channel 673' chromosome,integrase3e-1066.6
NC_015259:485015:5473145473145485251212Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIntegrase family protein3e-1066.2
NC_017328:335160:347776347776348240465Shigella flexneri 2002017 chromosome, complete genomeputative phage integrase3e-1066.2
NC_004337:309833:311291311291311755465Shigella flexneri 2a str. 301, complete genomeputative phage integrase3e-1066.2
NC_013854:2148215:215822121582212159126906Azospirillum sp. B510, complete genomeintegrase3e-1066.2
NC_003295:1654000:1669739166973916708031065Ralstonia solanacearum GMI1000, complete genomePUTATIVE INTEGRASE/RECOMBINASE PROTEIN3e-1066.2
NC_015850:1006980:1008592100859210096021011Acidithiobacillus caldus SM-1 chromosome, complete genomeputative phage integrase4e-1066.2
NC_009074:3791232:380255538025553802923369Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family5e-1065.5
NC_010513:1162232:117499511749951175825831Xylella fastidiosa M12 chromosome, complete genomephage integrase6e-1065.5
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family7e-1065.1
NC_012724:1308000:1310925131092513119921068Burkholderia glumae BGR1 chromosome 1, complete genomeProphage integrase7e-1065.1
NC_007519:2847816:2851683285168328529361254Desulfovibrio alaskensis G20 chromosome, complete genomesite-specific recombinase XerD-like1e-0964.7
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase1e-0964.7
NC_012108:1973861:1990732199073219918861155Desulfobacterium autotrophicum HRM2, complete genometyrosine recombinase XerD1e-0964.3
NC_009074:3791232:380235838023583802657300Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0963.5
NC_015410:1202370:120237012023701203362993Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase4e-0962.8
NC_012796:1049034:1129182112918211303061125Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase6e-0962
NC_014216:2538500:255809425580942559092999Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeintegrase family protein6e-0962
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase7e-0961.6
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family7e-0961.6
NC_007760:4055860:408811340881134088940828Anaeromyxobacter dehalogenans 2CP-C, complete genomePhage integrase7e-0961.6
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase7e-0961.6
NC_013722:3117442:3131487313148731325811095Xanthomonas albilineans, complete genomeputative shufflon-specific dna recombinase protein1e-0861.2
NC_011663:2123388:213140621314062132242837Shewanella baltica OS223 chromosome, complete genomeintegrase family protein1e-0861.2
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein1e-0861.2
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein1e-0861.2
NC_011740:2737467:275423227542322754492261Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-0861.2
NC_008340:1733735:174806117480611748975915Alkalilimnicola ehrlichei MLHE-1, complete genomephage integrase family protein2e-0860.1
NC_015410:1324313:1339411133941113404391029Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein3e-0859.7
NC_008687:302450:3053223053223065031182Paracoccus denitrificans PD1222 chromosome 2, complete sequencephage integrase family protein3e-0859.7
NC_015681:1558873:1561014156101415622041191Thermodesulfatator indicus DSM 15286 chromosome, complete genomeintegrase family protein4e-0859.3
NC_007626:959684:9702309702309713091080Magnetospirillum magneticum AMB-1, complete genomeIntegrase5e-0858.9
NC_008313:2685531:2688767268876726898131047Ralstonia eutropha H16 chromosome 1, complete sequencephage integrase family protein5e-0858.9
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein6e-0858.5
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase6e-0858.5
NC_015422:3581848:3595358359535835966021245Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein1e-0758.2
NC_012796:1049034:1064468106446810655861119Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase1e-0757.8
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase2e-0757.4
NC_019978:416637:4307344307344317831050Halobacteroides halobius DSM 5150, complete genomesite-specific recombinase XerD2e-0757.4
NC_010644:1540249:1550592155059215516051014Elusimicrobium minutum Pei191, complete genomeintegrase family protein2e-0757
NC_012796:1049034:1098591109859110997391149Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase2e-0756.6
NC_015410:1324313:133164413316441332582939Pseudomonas mendocina NK-01 chromosome, complete genomeputative integrase4e-0756.2
NC_009943:748788:7553137553137565061194Candidatus Desulfococcus oleovorans Hxd3, complete genomeintegrase family protein3e-0756.2
NC_007651:3560652:356953635695363570204669Burkholderia thailandensis E264 chromosome I, complete sequencesite-specific recombinase, phage integrase family5e-0755.8
NC_015730:3693391:371257937125793713577999Roseobacter litoralis Och 149 chromosome, complete genomephage integrase6e-0755.5
NC_014532:752807:7662597662597676141356Halomonas elongata DSM 2581, complete genomesite-specific recombinase, phage integrase family6e-0755.5
NC_015730:1107840:113211111321111133109999Roseobacter litoralis Och 149 chromosome, complete genomeputative phage integrase6e-0755.5
NC_012969:2476318:250802525080252508729705Methylovorus glucosetrophus SIP3-4 chromosome, complete genome6e-0755.5
NC_014972:1126426:1145414114541411465951182Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein8e-0755.1
NC_015410:2838132:285827228582722859261990Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein8e-0755.1
NC_013926:71186:902119021191023813Aciduliprofundum boonei T469 chromosome, complete genomeintegrase family protein8e-0755.1
NC_007434:1809946:185433418543341854720387Burkholderia pseudomallei 1710b chromosome I, complete sequenceprophage DLP12 integrase1e-0654.7
NC_015410:3502099:3522734352273435237531020Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein2e-0653.5
NC_015740:3486226:350299735029973503659663Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegrase3e-0653.1
NC_017030:8599515:8613843861384386150331191Corallococcus coralloides DSM 2259 chromosome, complete genomephage integrase family site specific recombinase3e-0653.1
NC_009439:2337024:2338357233835723393641008Pseudomonas mendocina ymp, complete genomephage integrase family protein3e-0653.1
NC_014623:1074299:1120983112098311221911209Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein3e-0653.1
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase3e-0653.1
NC_009074:1470689:149013114901311490529399Burkholderia pseudomallei 668 chromosome I, complete sequencesite-specific recombinase, phage integrase family3e-0653.1
NC_014972:1621850:163002716300271630962936Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein4e-0652.8
NC_007973:2150962:217175821717582172324567Ralstonia metallidurans CH34 chromosome 1, complete sequencephage integrase5e-0652.4
NC_008278:1876435:1889515188951518907321218Frankia alni ACN14a, complete genomeIntegrase5e-0652.4
NC_015711:7905360:7927693792769379289131221Myxococcus fulvus HW-1 chromosome, complete genomephage integrase family site specific recombinase7e-0652
NC_015942:403296:4146714146714157651095Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein8e-0651.6
NC_008095:6052139:6071158607115860721621005Myxococcus xanthus DK 1622, complete genomesite-specific recombinase, phage integrase family1e-0551.2