Pre_GI Gene

Some Help

Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:609464 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6094646120762613outer membrane usher protein SfmDQuickGO ontologyBLASTP
6120916130981008mannose binding protein FimHQuickGO ontologyBLASTP
613108613626519fimbrial proteinQuickGO ontologyBLASTP
613672614304633transcriptional regulator FimZQuickGO ontologyBLASTP
614908615630723fimbriae Y proteinQuickGO ontologyBLASTP
615591615743153hypothetical proteinBLASTP
616121616717597fimbriae W proteinQuickGO ontologyBLASTP
6170646182271164prophage DLP12 integraseQuickGO ontologyBLASTP
618879619190312hypothetical proteinBLASTP
619272619553282hypothetical proteinBLASTP
6195466206281083Eaa proteinQuickGO ontologyBLASTP
620625620918294Gp43QuickGO ontologyBLASTP
621303621884582Eae proteinQuickGO ontologyBLASTP
621881622051171hypothetical proteinBLASTP
622062622355294anti-RecBCD protein 2QuickGO ontologyBLASTP
622928623434507single-stranded DNA-binding proteinQuickGO ontologyBLASTP
623435624142708gp49QuickGO ontologyBLASTP
624151624339189hypothetical proteinBLASTP
624781624906126hypothetical proteinBLASTP
625165625311147hypothetical protein
625524625856333gp54QuickGO ontologyBLASTP
625876626073198hypothetical protein
626220626429210hypothetical proteinBLASTP
626465627388924hypothetical protein
628192628311120hypothetical protein
628305628421117hypothetical protein
628765628884120transcriptional activator-regulatory proteinQuickGO ontologyBLASTP
629058629891834DNA replication protein gp18QuickGO ontologyBLASTP
6298886312641377replicative DNA helicaseQuickGO ontologyBLASTP
631320631778459ninB proteinQuickGO ontologyBLASTP
631775632647873phosphoadenosine phosphosulfate reductase family proteinQuickGO ontologyBLASTP
632963633139177hypothetical proteinBLASTP
634411634548138gp23QuickGO ontologyBLASTP
634928635254327phage holin lambda familyQuickGO ontologyBLASTP
635238635675438phage lysozymeQuickGO ontologyBLASTP
635672636142471bacteriophage lysis proteinQuickGO ontologyBLASTP