Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:1918664:1932018 Citrobacter rodentium ICC168, complete genome

Start: 1932018, End: 1932533, Length: 516

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:1902995:190830219083021908823522Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-42171
NC_009436:1141376:117005011700501170601552Enterobacter sp. 638, complete genomefimbrial protein4e-31134
NC_020064:3790472:380234738023473802880534Serratia marcescens FGI94, complete genomeP pilus assembly protein, pilin FimA2e-2098.2
NC_009778:1902995:190893719089371909467531Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1994.7
NC_011283:2684046:269306326930632693569507Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein2e-1684.7
NC_013850:2685835:269785926978592698371513Klebsiella variicola At-22 chromosome, complete genomeFimbrial protein3e-1684.7
NC_009778:1902995:190775519077551908267513Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1580.9
NC_008253:4817864:485352248535224854025504Escherichia coli 536, complete genomeFimG protein precursor4e-1374.3
NC_007946:4875997:491303249130324913535504Escherichia coli UTI89, complete genometype 1 fimbriae minor subunit precursor FimG4e-1374.3
NC_004431:5123325:514301551430155143518504Escherichia coli CFT073, complete genomeFimG protein precursor3e-1374.3
NC_010498:4930649:495290849529084953411504Escherichia coli SMS-3-5, complete genomeprotein fimG6e-1373.6
NC_011283:819970:819970819970820470501Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein FimG1e-1272.4
NC_007613:4403070:442206644220664422569504Shigella boydii Sb227, complete genomefimbrial morphology2e-1272
NC_016822:4889656:491030649103064910809504Shigella sonnei 53G, complete genomeminor component of type 1 fimbriae2e-1271.6
NC_010694:3178842:319025431902543190757504Erwinia tasmaniensis, complete genomeMinor fimbrial subunit, FimG2e-1271.6
NC_009801:4882684:490530449053044905807504Escherichia coli E24377A, complete genomeprotein fimG2e-1271.6
NC_011742:4873351:489110848911084891611504Escherichia coli S88 chromosome, complete genomeminor component of type 1 fimbriae2e-1271.6
NC_012947:3883484:388440638844063884909504Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein3e-1271.2
NC_012759:4467288:448479344847934485296504Escherichia coli BW2952 chromosome, complete genomeminor component of type 1 fimbriae3e-1271.2
NC_004337:4374500:437565543756554376158504Shigella flexneri 2a str. 301, complete genomeminor fimbrial subunit, precursor polypeptide3e-1271.2
NC_000913:4528278:454630845463084546811504Escherichia coli K12, complete genomeminor component of type 1 fimbriae3e-1271.2
AC_000091:4534935:455296545529654553468504Escherichia coli W3110 DNA, complete genomeminor component of type 1 fimbriae3e-1271.2
NC_008258:4345400:434632243463224346825504Shigella flexneri 5 str. 8401, complete genomefimbrial morphology3e-1271.2
NC_004741:4364235:436675143667514367254504Shigella flexneri 2a str. 2457T, complete genomeminor fimbrial subunit, precursor polypeptide3e-1271.2
NC_011750:4978000:499573849957384996241504Escherichia coli IAI39 chromosome, complete genomeminor component of type 1 fimbriae3e-1271.2
NC_012967:4510393:452919945291994529702504Escherichia coli B str. REL606 chromosome, complete genomeminor component of type 1 fimbriae3e-1271.2
NC_013364:5255700:527974652797465280249504Escherichia coli O111:H- str. 11128, complete genomeminor component FimG of type 1 fimbriae3e-1271.2
NC_011751:5070597:508764450876445088147504Escherichia coli UMN026 chromosome, complete genomeminor component of type 1 fimbriae3e-1271.2
NC_016902:4199133:420164142016414202144504Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein3e-1271.2
NC_013941:5219841:524145752414575241960504Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeFimG3e-1271.2
NC_013361:5580741:559680055968005597303504Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor component FimG of type 1 fimbriae3e-1271.2
NC_013008:5411285:543288554328855433388504Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeminor subunit of type 1 fimbriae3e-1271.2
NC_011353:5455224:547682454768245477327504Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein fimG3e-1271.2
CP002516:4199133:420164142016414202144504Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein3e-1271.2
CP002185:4791811:481072648107264811229504Escherichia coli W, complete genomeputative fimbrial subunit protein3e-1271.2
NC_002695:5381576:540317654031765403679504Escherichia coli O157:H7 str. Sakai, complete genomeFimG3e-1271.2
CP002797:4656327:467625046762504676753504Escherichia coli NA114, complete genomeFimbrial protein FimG8e-1269.7
CU928160:4570498:460892746089274609430504Escherichia coli IAI1 chromosome, complete genomeminor component of type 1 fimbriae1e-1169.3
NC_011741:4570498:460892746089274609430504Escherichia coli IAI1 chromosome, complete genomeminor component of type 1 fimbriae1e-1169.3
NC_008253:296500:316433316433316924492Escherichia coli 536, complete genomeF1C minor fimbrial subunit protein G presursor1e-1168.9
NC_010498:1659328:166195716619571662487531Escherichia coli SMS-3-5, complete genomeprotein FimF-like protein9e-1063.2
CU928145:1684777:170067917006791701209531Escherichia coli 55989 chromosome, complete genomeputative fimbrial-like adhesin exported protein7e-1063.2
NC_011748:1684777:170067917006791701209531Escherichia coli 55989, complete genomeputative fimbrial-like adhesin exported protein7e-1063.2
AP010958:1711656:173232617323261732856531Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted fimbrial-like adhesin protein7e-1063.2
NC_013353:1711656:173232617323261732856531Escherichia coli O103:H2 str. 12009, complete genomefimbrial-like adhesin protein7e-1063.2
NC_009800:1589000:160513216051321605662531Escherichia coli HS, complete genomeprotein FimF homolog7e-1063.2
AC_000091:1574000:159002315900231590553531Escherichia coli W3110 DNA, complete genomepredicted fimbrial-like adhesin protein7e-1063.2
NC_000913:1570431:158633315863331586863531Escherichia coli K12, complete genomepredicted fimbrial-like adhesin protein7e-1063.2
NC_010468:2345781:235502723550272355557531Escherichia coli ATCC 8739, complete genomeFimbrial protein7e-1063.2
NC_012759:1462490:147839214783921478922531Escherichia coli BW2952 chromosome, complete genomeputative fimbrial-like adhesin protein7e-1063.2
NC_012947:2228235:223806322380632238593531Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein7e-1063.2
NC_012967:1546000:156226015622601562790531Escherichia coli B str. REL606 chromosome, complete genomeputative fimbrial-like adhesin protein7e-1063.2
NC_013361:2047170:206652120665212067051531Escherichia coli O26:H11 str. 11368 chromosome, complete genomefimbrial-like adhesin protein7e-1063.2
NC_013364:1902761:192211619221161922646531Escherichia coli O111:H- str. 11128, complete genomeputative fimbrial-like adhesin protein7e-1063.2
CP002797:1591000:159831715983171598820504Escherichia coli NA114, complete genomePutative fimbrial protein1e-0962.8
NC_008563:1620943:163685116368511637381531Escherichia coli APEC O1, complete genomepredicted fimbrial-like adhesin protein1e-0962.8
NC_004431:1754627:177398817739881774518531Escherichia coli CFT073, complete genomeHypothetical fimbrial-like protein ydeS precursor9e-1062.8
NC_002655:1966464:197838719783871978917531Escherichia coli O157:H7 EDL933, complete genomeputative fimbrial-like protein1e-0962.4
CP002516:2395578:240808824080882408618531Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein1e-0962.4
CP002185:1681327:169723016972301697760531Escherichia coli W, complete genomepredicted fimbrial-like adhesin protein1e-0962.4
NC_011751:1770376:178627817862781786808531Escherichia coli UMN026 chromosome, complete genomeputative fimbrial-like adhesin exported protein1e-0962.4
NC_002695:2091890:210955521095552110085531Escherichia coli O157:H7 str. Sakai, complete genomeputative fimbrial-like protein1e-0962.4
NC_011353:2004800:202415620241562024686531Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeFimF-like protein1e-0962.4
NC_013008:2007228:202313220231322023662531Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeF9 fimbriae protein1e-0962.4
NC_013941:1894496:191385319138531914383531Escherichia coli O55:H7 str. CB9615 chromosome, complete genomebiofilm-dependent modulation protein1e-0962.4
NC_016902:2395578:240808824080882408618531Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein1e-0962.4
CU928160:1579375:159527815952781595808531Escherichia coli IAI1 chromosome, complete genomeputative fimbrial-like adhesin exported protein1e-0962.4
NC_009801:1678790:169814516981451698675531Escherichia coli E24377A, complete genomefimbrial protein1e-0962.4
NC_011415:1669484:168538616853861685916531Escherichia coli SE11 chromosome, complete genomeputative fimbrial protein1e-0962.4
NC_011741:1579375:159527815952781595808531Escherichia coli IAI1 chromosome, complete genomeputative fimbrial-like adhesin exported protein1e-0962.4
NC_020181:3585898:359288535928853593454570Enterobacter aerogenes EA1509E, complete genomePutative fimbrial subunit2e-0962
NC_009801:1678790:169762916976291698132504Escherichia coli E24377A, complete genomeprotein fimG homolog2e-0962
NC_011748:1684777:170016317001631700666504Escherichia coli 55989, complete genomeputative fimbrial-like adhesin exported protein2e-0962
CU928145:1684777:170016317001631700666504Escherichia coli 55989 chromosome, complete genomeputative fimbrial-like adhesin exported protein2e-0962
NC_011415:1669484:168487016848701685373504Escherichia coli SE11 chromosome, complete genomeputative fimbrial protein2e-0962
NC_002695:2091890:210903921090392109542504Escherichia coli O157:H7 str. Sakai, complete genomeputative fimbrial-like protein3e-0961.2
NC_002655:1966464:197893019789301979433504Escherichia coli O157:H7 EDL933, complete genomeputative fimbrial-like protein3e-0961.2
NC_013008:2007228:202261620226162023119504Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeF9 fimbriae protein3e-0961.2
CP002797:1591000:159883315988331599363531Escherichia coli NA114, complete genomePutative fimbrial protein3e-0961.2
NC_013941:1894496:191333719133371913840504Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-0961.2
NC_008563:1620943:163633516363351636838504Escherichia coli APEC O1, complete genomepredicted fimbrial-like adhesin protein3e-0961.2
NC_010468:2345781:235557023555702356073504Escherichia coli ATCC 8739, complete genomeFimbrial protein4e-0960.8
NC_000913:1570431:158581715858171586320504Escherichia coli K12, complete genomepredicted fimbrial-like adhesin protein4e-0960.8
AC_000091:1574000:158950715895071590010504Escherichia coli W3110 DNA, complete genomepredicted fimbrial-like adhesin protein4e-0960.8
NC_010473:1661000:167641216764121676915504Escherichia coli str. K-12 substr. DH10B, complete genomepredicted fimbrial-like adhesin protein4e-0960.8
NC_012759:1462490:147787614778761478379504Escherichia coli BW2952 chromosome, complete genomeputative fimbrial-like adhesin protein4e-0960.8
NC_012947:2228235:223860622386062239109504Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein4e-0960.8
NC_012967:1546000:156174415617441562247504Escherichia coli B str. REL606 chromosome, complete genomeputative fimbrial-like adhesin protein4e-0960.8
NC_013361:2047170:206600520660052066508504Escherichia coli O26:H11 str. 11368 chromosome, complete genomefimbrial-like adhesin protein4e-0960.8
NC_013364:1902761:192160019216001922103504Escherichia coli O111:H- str. 11128, complete genomeputative fimbrial-like adhesin protein4e-0960.8
NC_004431:1754627:177347217734721773975504Escherichia coli CFT073, complete genomeHypothetical fimbrial-like protein ydeR precursor5e-0960.5
NC_011601:1675000:169044416904441690947504Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomefimbrial protein-like protein5e-0960.5
NC_009800:1589000:160461616046161605119504Escherichia coli HS, complete genomeprotein fimG homolog5e-0960.5
CU928160:1579375:159476215947621595265504Escherichia coli IAI1 chromosome, complete genomeputative fimbrial-like adhesin exported protein5e-0960.5
CP002516:2395578:240863124086312409134504Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein5e-0960.5
NC_011751:1770376:178576217857621786265504Escherichia coli UMN026 chromosome, complete genomeputative fimbrial-like adhesin exported protein5e-0960.5
CP002185:1681327:169671416967141697217504Escherichia coli W, complete genomepredicted fimbrial-like adhesin protein5e-0960.5
NC_011741:1579375:159476215947621595265504Escherichia coli IAI1 chromosome, complete genomeputative fimbrial-like adhesin exported protein5e-0960.5
NC_016902:2395578:240863124086312409134504Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein5e-0960.5
NC_015566:1206500:122063112206311221164534Serratia sp. AS12 chromosome, complete genomeFimbrial protein domain-containing protein9e-0959.7
NC_015567:1206727:122081612208161221349534Serratia sp. AS9 chromosome, complete genomeFimbrial protein domain-containing protein9e-0959.7
NC_015567:1206727:122135812213581221843486Serratia sp. AS9 chromosome, complete genomeFimbrial protein domain-containing protein8e-0959.7
NC_015566:1206500:122117312211731221658486Serratia sp. AS12 chromosome, complete genomeFimbrial protein domain-containing protein8e-0959.7
NC_011601:1675000:169096016909601691490531Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomefimbrial protein-like protein1e-0859.3
NC_021066:4906239:490573049057304906248519Raoultella ornithinolytica B6, complete genomeP pilus assembly protein, pilin FimA2e-0858.5
NC_010498:1659328:166250016625001663147648Escherichia coli SMS-3-5, complete genomeprotein FimG-like protein8e-0856.2
NC_000913:558920:562553562553563068516Escherichia coli K12, complete genomepredicted fimbrial-like adhesin protein2e-0755.5
NC_010473:498252:501885501885502400516Escherichia coli str. K-12 substr. DH10B, complete genomepredicted fimbrial-like adhesin protein2e-0755.5
AC_000091:558920:562553562553563068516Escherichia coli W3110 DNA, complete genomepredicted fimbrial-like adhesin protein2e-0755.5
NC_012759:461680:465313465313465828516Escherichia coli BW2952 chromosome, complete genomeputative fimbrial protein2e-0755.5
NC_010465:733916:755096755096755626531Yersinia pseudotuberculosis YPIII, complete genomeFimbrial protein2e-0755.1
NC_006155:3992818:399747039974703998000531Yersinia pseudotuberculosis IP 32953, complete genomeputative mannose-resistant Proteus-like fimbrial protein2e-0755.1
NC_010634:3905369:390889039088903909420531Yersinia pseudotuberculosis PB1/+, complete genomefimbrial protein5e-0753.9
NC_012947:3231893:324944632494463249961516Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein5e-0753.9
NC_012967:531000:535444535444535959516Escherichia coli B str. REL606 chromosome, complete genomeputative fimbrial protein5e-0753.9
NC_011415:600375:606847606847607362516Escherichia coli SE11 chromosome, complete genomeputative fimbrial protein1e-0652.8
NC_016612:1790256:179840217984021798965564Klebsiella oxytoca KCTC 1686 chromosome, complete genomefimbrial morphology protein2e-0652
NC_004431:1166568:119336311933631193866504Escherichia coli CFT073, complete genomeF1C minor fimbrial subunit protein G presursor2e-0651.6
NC_010694:3178842:319077031907703191294525Erwinia tasmaniensis, complete genomeMinor fimbrial subunit, polypeptide (FimF)4e-0650.8
NC_011283:2684046:269792626979262698456531Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein8e-0650.1
NC_013850:2685835:270272227027222703252531Klebsiella variicola At-22 chromosome, complete genomeFimbrial protein8e-0650.1