Pre_GI: BLASTP Hits

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Query: NC_013410:3358008:3373518 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3373518, End: 3373958, Length: 441

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019940:2893535:291515729151572915483327Thioflavicoccus mobilis 8321 chromosome, complete genomerhodanese-related sulfurtransferase2e-1580.9
NC_006274:765870:7747077747077763711665Bacillus cereus E33L, complete genomeNADH dehydrogenase2e-1478.2
NC_017208:823540:8316038316038332671665Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeNADH dehydrogenase5e-1476.3
NC_020134:1783000:1797885179788517995161632Clostridium stercorarium subsp. stercorarium DSM 8532, completeNADH oxidase Nox6e-1476.3
NC_014915:2092678:2112410211241021140531644Geobacillus sp. Y412MC52 chromosome, complete genomeCoA-disulfide reductase7e-1475.9
NC_013205:1275012:130177013017701302162393Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Rhodanese domain protein2e-1374.7
NC_004088:1622941:1640419164041916420651647Yersinia pestis KIM, complete genomeNADH oxidase4e-1270.1
NC_008149:1556581:1570342157034215719881647Yersinia pestis Nepal516, complete genomepyridine nucleotide-disulphide oxidoreductase4e-1270.1
NC_008150:2451872:2457618245761824592641647Yersinia pestis Antiqua, complete genomeputative pyridine nucleotide-disulphide oxidoreductase4e-1270.1
NC_005810:2905362:2911108291110829127541647Yersinia pestis biovar Microtus str. 91001, complete genomeputative pyridine nucleotide-disulphide oxidoreductase4e-1270.1
NC_010465:1550617:1568109156810915697551647Yersinia pseudotuberculosis YPIII, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase4e-1270.1
NC_010159:2878499:2882870288287028845161647Yersinia pestis Angola, complete genomepyridine nucleotide-disulphide oxidoreductase family protein4e-1270.1
NC_010634:3129174:3134920313492031365661647Yersinia pseudotuberculosis PB1/+, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase4e-1270.1
NC_006155:3212796:3217167321716732188131647Yersinia pseudotuberculosis IP 32953, complete genomeputative pyridine nucleotide-disulphide oxidoreductase4e-1270.1
NC_003143:3346834:3352580335258033542261647Yersinia pestis CO92, complete genomeputative pyridine nucleotide-disulphide oxidoreductase4e-1270.1
NC_017265:1346685:1359580135958013612261647Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,soluble pyridine nucleotide transhydrogenase4e-1270.1
NC_017168:2394079:2407840240784024094861647Yersinia pestis A1122 chromosome, complete genomeputative pyridine nucleotide-disulfide oxidoreductase4e-1270.1
NC_017160:3326199:3331945333194533335911647Yersinia pestis D182038 chromosome, complete genomeputative pyridine nucleotide-disulfide oxidoreductase4e-1270.1
NC_017154:3344273:3350019335001933516651647Yersinia pestis D106004 chromosome, complete genomeputative pyridine nucleotide-disulfide oxidoreductase4e-1270.1
NC_014029:3401238:3406984340698434086301647Yersinia pestis Z176003 chromosome, complete genomeputative pyridine nucleotide-disulfide oxidoreductase4e-1270.1
NC_009708:1522281:1533506153350615351521647Yersinia pseudotuberculosis IP 31758 chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase family protein4e-1270.1
NC_009381:2373847:2378218237821823798641647Yersinia pestis Pestoides F chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase4e-1270.1
NC_009328:2083386:210029921002992100868570Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemolybdopterin biosynthesis MoeB protein-like protein6e-1269.7
NC_020210:2133996:213603621360362136605570Geobacillus sp. GHH01, complete genomeUPF0033 family protein6e-1269.7
NC_014915:2092678:209267820926782093247570Geobacillus sp. Y412MC52 chromosome, complete genomeSirA-like domain-containing protein8e-1269.3
NC_013411:2951559:295274629527462953315570Geobacillus sp. Y412MC61, complete genomeSirA family protein8e-1269.3
NC_006510:2110430:211043021104302110999570Geobacillus kaustophilus HTA426, complete genomehypothetical protein8e-1269.3
NC_016628:1190366:120513512051351205509375Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage shock protein E7e-1269.3
NC_015555:211935:2263132263132287812469Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCoA-disulfide reductase7e-1269.3
NC_019897:4014485:403059840305984030969372Thermobacillus composti KWC4 chromosome, complete genomerhodanese-related sulfurtransferase6e-1269.3
NC_003552:3092456:309911230991123099660549Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-1168.2
NC_014206:1497942:1502146150214615037891644Geobacillus sp. C56-T3 chromosome, complete genomeCoA-disulfide reductase2e-1167.8
NC_014614:656000:6767836767836792662484Clostridium sticklandii, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor4e-1167
NC_020389:1936000:195744119574411957884444Methanosarcina mazei Tuc01, complete genomehypothetical protein4e-1167
NC_009725:496443:524287524287524655369Bacillus amyloliquefaciens FZB42, complete genomeputative rhodanese-like domain protein5e-1166.6
NC_012526:1345597:136227513622751362763489Deinococcus deserti VCD115, complete genomeputative thiosulfate sulfurtransferase (rhodanese)5e-1166.6
NC_008095:5312926:531462553146255314981357Myxococcus xanthus DK 1622, complete genomerhodanese-like domain protein8e-1165.9
NC_009328:2083386:210120121012012101566366Geobacillus thermodenitrificans NG80-2 chromosome, complete genomerhodanese-related sulfurtransferase-like protein1e-1065.5
NC_017208:823540:835831835831836190360Bacillus thuringiensis serovar chinensis CT-43 chromosome, completerhodanese-related sulfurtransferase1e-1065.5
NC_015949:1887478:1903596190359619052841689Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase9e-1165.5
NC_012440:1841315:186556218655621865942381Persephonella marina EX-H1, complete genomehypothetical protein1e-1065.1
NC_007520:2128178:214673621467362147185450Thiomicrospira crunogena XCL-2, complete genomeRhodanese-like2e-1064.7
NC_009848:161373:183390183390183743354Bacillus pumilus SAFR-032, complete genomerhodanese-domain-containing protein2e-1064.7
NC_003454:370418:3907623907623931942433Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeCoenzyme A disulfide reductase/ disulfide bond regulator domain2e-1064.7
NC_020210:2133996:213662721366272136923297Geobacillus sp. GHH01, complete genomeUPF0033 family protein3e-1064.3
NC_009328:2083386:210089221008922101188297Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemolybdopterin biosynthesis MoeB protein-like protein2e-1064.3
NC_016627:689406:6965666965666990312466Clostridium clariflavum DSM 19732 chromosome, complete genomeNAD(FAD)-dependent dehydrogenase2e-1064.3
NC_015519:270637:2736932736932762452553Tepidanaerobacter sp. Re1 chromosome, complete genomeCoA-disulfide reductase2e-1064.3
NC_013411:2951559:295333929533392953635297Geobacillus sp. Y412MC61, complete genomeRhodanese domain protein3e-1063.9
NC_014915:2092678:209327120932712093567297Geobacillus sp. Y412MC52 chromosome, complete genomeRhodanese domain protein3e-1063.9
NC_021171:4425050:444290044429004443196297Bacillus sp. 1NLA3E, complete genomerhodanese-like protein3e-1063.9
NC_013411:2951559:295364829536482954013366Geobacillus sp. Y412MC61, complete genomeRhodanese domain protein4e-1063.5
NC_014915:2092678:209358020935802093945366Geobacillus sp. Y412MC52 chromosome, complete genomeRhodanese domain protein4e-1063.5
NC_006510:2110430:211102321110232111319297Geobacillus kaustophilus HTA426, complete genomehypothetical protein5e-1063.2
NC_004193:2342528:235578023557802356088309Oceanobacillus iheyensis HTE831, complete genomehypothetical protein6e-1062.8
NC_020210:2133996:213693621369362137301366Geobacillus sp. GHH01, complete genomerhodanese-like protein1e-0961.6
NC_011979:537862:559561559561559938378Geobacter sp. FRC-32, complete genomeRhodanese domain protein3e-0960.8
NC_010508:981377:981377981377981700324Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceRhodanese domain protein3e-0960.8
NC_008060:476861:476861476861477184324Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceRhodanese-like3e-0960.8
NC_006510:2110430:211133221113322111697366Geobacillus kaustophilus HTA426, complete genomehypothetical protein3e-0960.8
NC_014733:107394:112664112664113029366Methylovorus sp. MP688 chromosome, complete genomerhodanese domain protein3e-0960.5
NC_021171:4425050:444325244432524443830579Bacillus sp. 1NLA3E, complete genomeSirA family protein3e-0960.5
NC_015563:3203012:320457832045783204925348Delftia sp. Cs1-4 chromosome, complete genomeRhodanese-like protein4e-0960.5
NC_020244:2509000:252334025233402523681342Bacillus subtilis XF-1, complete genomehypothetical protein4e-0960.5
NC_010084:2674972:269446726944672694790324Burkholderia multivorans ATCC 17616 chromosome 1, completerhodanese domain-containing protein4e-0960.1
NC_012440:1080675:109974410997441100151408Persephonella marina EX-H1, complete genomerhodanese domain protein6e-0959.7
NC_008554:484267:487330487330488166837Syntrophobacter fumaroxidans MPOB, complete genomeRhodanese domain protein8e-0959.3
NC_014330:2520906:254268125426812543064384Brachyspira pilosicoli 95/1000 chromosome, complete genomerhodanese domain-containing protein9e-0958.9
NC_014121:489500:4896234896234912811659Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative NADH oxidase1e-0858.9
NC_017243:685783:687121687121687426306Brachyspira intermedia PWS/A chromosome, complete genomerhodanese domain-containing protein1e-0858.5
NC_015636:468500:471131471131471454324Methanothermococcus okinawensis IH1 chromosome, complete genomeRhodanese-like protein2e-0858.2
NC_009480:99640:118888118888119187300Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein2e-0858.2
NC_014831:285759:294172294172294513342Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRhodanese domain protein2e-0858.2
NC_006274:765870:779309779309779605297Bacillus cereus E33L, complete genomerhodanese-like domain protein2e-0857.8
NC_014836:155924:171715171715172143429Desulfurispirillum indicum S5 chromosome, complete genomeRhodanese domain-containing protein2e-0857.8
NC_006274:765870:778935778935779294360Bacillus cereus E33L, complete genomerhodanese-like domain protein2e-0857.8
NC_011027:1488455:149554614955461495935390Chlorobaculum parvum NCIB 8327, complete genomeRhodanese domain protein2e-0857.8
NC_014972:1407632:1424858142485814261591302Desulfobulbus propionicus DSM 2032 chromosome, complete genomeRhodanese domain-containing protein3e-0857.4
NC_012526:131000:135783135783136181399Deinococcus deserti VCD115, complete genomeputative Rhodanese domain protein3e-0857
NC_009074:2970435:300633530063353006658324Burkholderia pseudomallei 668 chromosome I, complete sequencerhodanese domain protein4e-0857
NC_006322:2658587:268163026816302682202573Bacillus licheniformis ATCC 14580, complete genomeYrkF4e-0857
NC_006270:2657726:268077026807702681342573Bacillus licheniformis ATCC 14580, complete genomeYrkF4e-0857
NC_013526:911909:9123319123319137611431Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomebeta-lactamase domain protein6e-0856.2
NC_017208:823540:836205836205836501297Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemolybdopterin biosynthesis MoeB1e-0755.5
NC_009480:99640:1172131172131188711659Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative NADH oxidase1e-0755.5
NC_014311:2781898:278189827818982782230333Ralstonia solanacearum PSI07 chromosome, complete genomethiosulfate sulfurtransferase, Rhodanese-like domain (glpE)1e-0755.1
NC_009434:796878:827210827210827539330Pseudomonas stutzeri A1501, complete genomethiosulfate sulfurtransferase1e-0755.1
NC_008095:5312926:531831853183185318644327Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-0755.1
NC_013851:3392644:341470234147023415124423Allochromatium vinosum DSM 180 chromosome, complete genomeRhodanese domain protein1e-0755.1
NC_008571:505776:5217135217135227231011Gramella forsetii KT0803, complete genomemolybdenum cofactor biosynthesis protein2e-0754.7
NC_008610:1068429:107591110759111076198288Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),Rhodanese domain protein2e-0754.3
NC_021175:964224:9841889841889858401653Streptococcus oligofermentans AS 1.3089, complete genomeNAD(FAD)-dependent dehydrogenase2e-0754.3
NC_014152:927969:9433949433949450701677Thermincola sp. JR, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-0753.9
NC_009465:938378:942804942804943175372Candidatus Vesicomyosocius okutanii HA, complete genomerhodanese family protein3e-0753.9
NC_009614:769851:780519780519780917399Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein3e-0753.9
NC_011830:1288984:131851813185181319372855Desulfitobacterium hafniense DCB-2, complete genomeRhodanese domain protein4e-0753.5
NC_009659:2849000:286937128693712870057687Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein5e-0753.1
NC_014761:1405408:142954314295431429821279Oceanithermus profundus DSM 14977 chromosome, complete genomerhodanese domain protein5e-0753.1
NC_014364:2904443:291872629187262919223498Spirochaeta smaragdinae DSM 11293 chromosome, complete genome5e-0753.1
NC_014541:3642241:364823636482363648700465Ferrimonas balearica DSM 9799 chromosome, complete genomethiosulfate sulfurtransferase6e-0753.1
NC_017033:1672313:1673267167326716744811215Frateuria aurantia DSM 6220 chromosome, complete genomedinucleotide-utilizing protein8e-0752.8
NC_015572:293665:295970295970296407438Methylomonas methanica MC09 chromosome, complete genomeRhodanese-like protein7e-0752.8
NC_007759:2748000:2764995276499527664521458Syntrophus aciditrophicus SB, complete genomehydroxyacylglutathione hydrolase7e-0752.8
NC_015587:278000:278707278707279018312Hydrogenobaculum sp. SHO chromosome, complete genomeRhodanese-like protein6e-0752.8
NC_020411:278000:278703278703279014312Hydrogenobaculum sp. HO, complete genomethiosulfate sulfurtransferase6e-0752.8
NC_015557:278000:278671278671278982312Hydrogenobaculum sp. 3684 chromosome, complete genomeRhodanese-like protein6e-0752.8
NC_007498:2638671:265505926550592655901843Pelobacter carbinolicus DSM 2380, complete genomerhodanese-related sulfurtransferase9e-0752.4
NC_007530:4507742:452011345201134520418306Bacillus anthracis str. 'Ames Ancestor', complete genomerhodanese-like domain protein1e-0652
NC_005945:4508304:452119745211974521502306Bacillus anthracis str. Sterne, complete genomerhodanese-like domain protein1e-0652
NC_005957:4502733:451689445168944517199306Bacillus thuringiensis serovar konkukian str. 97-27, completerhodanese-like domain protein1e-0652
NC_008600:4509793:452303545230354523433399Bacillus thuringiensis str. Al Hakam, complete genomerhodanese-like domain protein1e-0652
NC_015740:1594376:161599116159911616347357Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completerhodanese domain-containing protein1e-0652
NC_003997:4507939:451998645199864520291306Bacillus anthracis str. Ames, complete genomerhodanese-like domain protein1e-0652
NC_014335:4442500:445654144565414456846306Bacillus cereus biovar anthracis str. CI chromosome, completerhodanese-like domain-containing protein1e-0652
NC_011773:4569600:458570545857054586010306Bacillus cereus AH820 chromosome, complete genomerhodanese-like domain-containing protein1e-0652
NC_012581:4509491:452242045224204522725306Bacillus anthracis str. CDC 684 chromosome, complete genomerhodanese-like domain-containing protein1e-0652
NC_012659:4507966:452001345200134520318306Bacillus anthracis str. A0248, complete genomerhodanese-like domain protein1e-0652
NC_006274:4563455:457657345765734576878306Bacillus cereus E33L, complete genomerhodanese-like domain protein1e-0652
NC_004722:4645678:466204846620484662353306Bacillus cereus ATCC 14579, complete genomeMolybdopterin biosynthesis MoeB protein1e-0652
NC_009009:1295607:129965312996531299967315Streptococcus sanguinis SK36, complete genomeRhodanese-like domain protein, putative1e-0652
NC_011658:4492356:450649345064934506798306Bacillus cereus AH187 chromosome, complete genomerhodanese-like domain-containing protein2e-0651.6
NC_016779:4475425:448874044887404489045306Bacillus cereus F837/76 chromosome, complete genomeRhodanese-like domain-containing protein2e-0651.6
NC_012472:4515909:452922445292244529529306Bacillus cereus 03BB102, complete genomerhodanese-like domain protein2e-0651.6
NC_006155:652500:6623056623056635311227Yersinia pseudotuberculosis IP 32953, complete genomeputative protein involved in molybdopterin biosynthesis2e-0651.6
NC_010634:635362:6449106449106461361227Yersinia pseudotuberculosis PB1/+, complete genomeUBA/THIF-type NAD/FAD binding protein2e-0651.6
NC_011969:4432454:444690544469054447210306Bacillus cereus Q1 chromosome, complete genomerhodanese-like domain-containing protein2e-0651.6
NC_016771:4445815:446027644602764460581306Bacillus cereus NC7401, complete genomerhodanese-like domain-containing protein2e-0651.6
NC_010184:4532262:454606445460644546369306Bacillus weihenstephanensis KBAB4, complete genomeRhodanese domain protein1e-0651.6
NC_017208:4692478:470582047058204706125306Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemolybdopterin biosynthesis protein MoeB1e-0651.6
NC_014171:4560061:457642645764264576731306Bacillus thuringiensis BMB171 chromosome, complete genomemolybdopterin biosynthesis protein MoeB1e-0651.6
NC_011725:4671432:468629846862984686603306Bacillus cereus B4264 chromosome, complete genomerhodanese-like domain-containing protein1e-0651.6
NC_003909:4484278:450061845006184500923306Bacillus cereus ATCC 10987, complete genomerhodanese-like domain protein1e-0651.6
NC_017200:4520482:453245345324534532758306Bacillus thuringiensis serovar finitimus YBT-020 chromosome,rhodanese-like domain-containing protein1e-0651.6
NC_016616:1336000:133658513365851336998414Dechlorosoma suillum PS chromosome, complete genomeRhodanese-related sulfurtransferase2e-0651.2
NC_014206:1497942:1505794150579415072031410Geobacillus sp. C56-T3 chromosome, complete genomerhodanese2e-0651.2
NC_014915:2092678:2108996210899621104051410Geobacillus sp. Y412MC52 chromosome, complete genomeRhodanese domain protein2e-0651.2
NC_007168:1167454:117244511724451172756312Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0651.2
NC_013411:2951559:2969065296906529704741410Geobacillus sp. Y412MC61, complete genomebeta-lactamase domain protein2e-0651.2
NC_002976:1361364:137710413771041377415312Staphylococcus epidermidis RP62A, complete genomerhodanese-like domain protein2e-0651.2
NC_004461:1465397:148113714811371481448312Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein2e-0651.2
NC_018876:307464:3248153248153261851371Methanolobus psychrophilus R15 chromosome, complete genomemetallo-beta-lactamase2e-0651.2
NC_007519:3240864:324612932461293246995867Desulfovibrio alaskensis G20 chromosome, complete genomerhodanese-like protein2e-0651.2
NC_014219:2491021:250853325085332508907375Bacillus selenitireducens MLS10 chromosome, complete genomeRhodanese domain protein3e-0650.8
NC_014828:637523:640898640898641248351Ethanoligenens harbinense YUAN-3 chromosome, complete genomeRhodanese domain protein3e-0650.4
NC_019897:4014485:402701940270194027597579Thermobacillus composti KWC4 chromosome, complete genomerhodanese-related sulfurtransferase4e-0650.1
NC_014831:1906691:192185619218561922365510Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRhodanese domain protein6e-0649.7