Pre_GI: BLASTP Hits

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Query: NC_010634:2124185:2128412 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 2128412, End: 2129065, Length: 654

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:2208686:221214522121452212798654Yersinia pseudotuberculosis IP 32953, complete genomesimilar to Orf81 bacteriophage 1863e-121434
NC_011667:1:469146915296606Thauera sp. MZ1T plasmid pTha01, complete sequenceExonuclease RNase T and DNA polymerase III6e-50197
NC_011147:2676972:268684526868452687429585Salmonella enterica subsp. enterica serovar Paratyphi A strexonuclease5e-46184
NC_006511:2677964:269130926913092691893585Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative exonuclease5e-46184
NC_003198:4453457:450308645030864503670585Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative exonuclease5e-46184
NC_016845:4046142:405387740538774054458582Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative exonuclease CP812e-45182
NC_020260:312805:321527321527322111585Cronobacter sakazakii Sp291, complete genomeputative exonuclease CP814e-45181
NC_017506:2089769:210113921011392101711573Marinobacter adhaerens HP15 chromosome, complete genomeexonuclease RNase T and DNA polymerase III2e-43175
NC_013508:3188978:322647132264713227070600Edwardsiella tarda EIB202, complete genomeOrf81 bacteriophage 1864e-38157
NC_007645:6858465:687346568734656874034570Hahella chejuensis KCTC 2396, complete genomeputative exonuclease1e-36153
NC_009837:92000:109015109015109878864Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceYacC2e-29129
NC_019757:5852000:586552858655285866355828Cylindrospermum stagnale PCC 7417, complete genomeDNA polymerase III epsilon subunit-like 3'-5' exonuclease2e-23108
NC_004431:1166568:116782311678231168386564Escherichia coli CFT073, complete genomehypothetical protein6e-1994
NC_020419:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeDNA polymerase III epsilon subunit1e-1169.7
NS_000191:1037899:105155110515511052147597Uncultured Termite group 1 bacterium phylotype Rs-D17, completeDNA polymerase III epsilon subunit1e-1169.7
NC_012438:1514376:152834415283441528961618Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA polymerase III PolC-type (PolIII)4e-1168.2
NC_017167:1648913:178021217802121781027816Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit epsilon2e-1065.9
NC_014727:2036340:205057920505792051475897Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii polc-type2e-1065.9
NC_005295:845000:848673848673849401729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon subunit4e-1065.1
NC_006831:821000:824448824448825176729Ehrlichia ruminantium str. Gardel, complete genomeDNA polymerase III, epsilon chain4e-1064.7
NC_013205:1123280:115256811525681153290723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit4e-1064.7
NC_013205:1548500:155584215558421556564723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit5e-1064.3
NC_006832:825000:828548828548829276729Ehrlichia ruminantium str. Welgevonden, complete genomeDNA polymerase III, epsilon chain1e-0963.5
NC_005945:3359598:337683333768333377780948Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit epsilon1e-0963.5
NC_015554:4724245:4724245472424547263772133Alteromonas sp. SN2 chromosome, complete genomeDNA polymerase III, epsilon subunit2e-0962.8
NC_014152:1430156:1433347143334714376754329Thermincola sp. JR, complete genomeDNA polymerase III, alpha subunit2e-0962.4
NC_021182:4829000:4832933483293348372764344Clostridium pasteurianum BC1, complete genomeDNA polymerase III, alpha chain8e-0960.5
NC_008149:3251196:327387932738793274643765Yersinia pestis Nepal516, complete genomeDNA polymerase III, epsilon chain1e-0860.1
NC_004088:3382148:340481234048123405576765Yersinia pestis KIM, complete genomeDNA polymerase III subunit epsilon1e-0860.1
NC_009381:1783886:182654518265451827309765Yersinia pestis Pestoides F chromosome, complete genomeDNA polymerase III subunit epsilon1e-0860.1
NC_009664:3718927:3738654373865437404591806Kineococcus radiotolerans SRS30216, complete genomeDNA polymerase III, epsilon subunit1e-0860.1
NC_013205:526281:554529554529555251723Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, epsilon subunit1e-0860.1
NC_008340:2272692:2275718227571822779072190Alkalilimnicola ehrlichei MLHE-1, complete genomeputative PAS/PAC sensor protein2e-0859.7
NC_011658:3603009:3617434361743436217354302Bacillus cereus AH187 chromosome, complete genomeDNA polymerase III PolC1e-0859.7
NC_011969:3549000:3561396356139635656974302Bacillus cereus Q1 chromosome, complete genomeDNA polymerase iii polc1e-0859.7
NC_016771:3555506:3569931356993135742324302Bacillus cereus NC7401, complete genomeDNA polymerase III subunit alpha1e-0859.7
NC_017167:2298962:235386823538682354572705Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit epsilon1e-0859.7
NC_004722:3777907:3790222379022237945294308Bacillus cereus ATCC 14579, complete genomeDNA polymerase III subunit alpha2e-0859.3
NC_011772:3787500:3799826379982638041274302Bacillus cereus G9842, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-0859.3
NC_011725:3821789:3834107383410738384084302Bacillus cereus B4264 chromosome, complete genomeDNA polymerase III PolC2e-0859.3
NC_014171:3701051:3713367371336737176684302Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III PolC2e-0859.3
NC_017208:3816753:3829460382946038337614302Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III PolC2e-0859.3
NC_009488:1165927:118756911875691188237669Orientia tsutsugamushi str. Boryong, complete genomeDNA polymerase III epsilon chain2e-0859.3
NC_010184:3675424:3688149368814936924504302Bacillus weihenstephanensis KBAB4, complete genomeDNA polymerase III, alpha subunit2e-0859.3
NC_003909:3606177:3606177360617736090892913Bacillus cereus ATCC 10987, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-0859.3
NC_007802:179780:185734185734186429696Jannaschia sp. CCS1, complete genomeDNA polymerase III, epsilon subunit2e-0858.9
NC_013037:6209424:621973662197366220260525Dyadobacter fermentans DSM 18053, complete genomeDNA polymerase III, epsilon subunit3e-0858.5
NC_009901:2915939:293148329314832932211729Shewanella pealeana ATCC 700345, complete genomeDNA polymerase III, epsilon subunit3e-0858.5
NC_009674:2551759:2564124256412425684254302Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDNA polymerase III PolC3e-0858.5
NC_017179:1378875:1381865138186513861634299Clostridium difficile BI1, complete genomeDNA polymerase III PolC-type5e-0858.2
NC_013315:1370000:1372091137209113763894299Clostridium difficile CD196 chromosome, complete genomeDNA polymerase III PolC-type5e-0858.2
NC_013169:1661135:1661135166113516628891755Kytococcus sedentarius DSM 20547, complete genomeexonuclease, DNA polymerase III, epsilon subunit family5e-0858.2
NC_015589:1899329:1899329189932919036064278Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase III subunit alpha5e-0857.8
NC_015389:2101841:2105296210529621082292934Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, epsilon subunit6e-0857.8
NC_014210:3742112:3757353375735337591401788Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, epsilon subunit8e-0857.4
NC_007517:3430237:345016934501693450825657Geobacter metallireducens GS-15, complete genomeDNA polymerase III, epsilon subunit7e-0857.4
NC_010531:708049:722835722835723545711Polynucleobacter necessarius STIR1, complete genomeDNA polymerase III, epsilon subunit7e-0857.4
NC_005957:3638750:3651061365106136553624302Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA polymerase III subunit alpha8e-0857
NC_014335:3567931:3580242358024235845434302Bacillus cereus biovar anthracis str. CI chromosome, completeDNA polymerase III subunit alpha1e-0756.6
NC_008600:3643905:3660271366027136631892919Bacillus thuringiensis str. Al Hakam, complete genomeDNA polymerase III, alpha subunit1e-0756.6
NC_005945:3615623:3630085363008536343864302Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit alpha1e-0756.6
NC_007530:3616828:3629517362951736338184302Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA polymerase III subunit alpha1e-0756.6
NC_012472:3661912:3678278367827836811902913Bacillus cereus 03BB102, complete genomeDNA polymerase III, PolC-type1e-0756.6
NC_006274:3697255:3709943370994337142444302Bacillus cereus E33L, complete genomeDNA polymerase III subunit alpha1e-0756.6
NC_003997:3617000:3629390362939036336914302Bacillus anthracis str. Ames, complete genomeDNA polymerase III subunit alpha1e-0756.6
NC_011773:3651963:3664276366427636685774302Bacillus cereus AH820 chromosome, complete genomeDNA polymerase III PolC1e-0756.6
NC_012581:559182:6048696048696091704302Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA polymerase III PolC1e-0756.6
NC_012659:3617000:3629417362941736337184302Bacillus anthracis str. A0248, complete genomeDNA polymerase III PolC1e-0756.6
NC_016779:3579743:3596109359610935990212913Bacillus cereus F837/76 chromosome, complete genomeDNA polymerase III subunit alpha1e-0756.6
NC_015514:2414617:2418229241822924200911863Cellulomonas fimi ATCC 484 chromosome, complete genomeDNA polymerase III subunit epsilon1e-0756.2
NC_009952:3596399:363066736306673631359693Dinoroseobacter shibae DFL 12, complete genomeDNA polymerase III subunit epsilon2e-0756.2
NC_002939:1505701:151169815116981512243546Geobacter sulfurreducens PCA, complete genomeexonuclease2e-0756.2
NC_012526:2155947:215999921599992160607609Deinococcus deserti VCD115, complete genomeputative DNA-directed DNA polymerase (DNA polymerase III, epsilon subunit)2e-0755.8
NC_016822:246715:248755248755249486732Shigella sonnei 53G, complete genomeDNA polymerase III subunit epsilon3e-0755.5
NC_016902:3863932:387441338744133875153741Escherichia coli KO11FL chromosome, complete genomeDNA polymerase III subunit epsilon3e-0755.5
CP002185:234719:236750236750237490741Escherichia coli W, complete genomeDNA polymerase III, epsilon subunit3e-0755.5
CP002516:3863932:387441338744133875153741Escherichia coli KO11, complete genomeDNA polymerase III, epsilon subunit3e-0755.5
NC_019970:1343670:1355741135574113599734233Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA polymerase III, alpha chain4e-0755.1
NC_007164:822000:830685830685831353669Corynebacterium jeikeium K411, complete genomehypothetical protein4e-0755.1
NC_008577:2818546:284401128440112844739729Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase III, epsilon subunit4e-0754.7
NC_014837:2354241:236160723616072362275669Pantoea sp. At-9b chromosome, complete genomeDNA polymerase III subunit epsilon6e-0754.3
NC_011149:309556:313026313026313766741Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA polymerase III, epsilon subunit7e-0754.3
NC_013850:1887556:189040318904031891062660Klebsiella variicola At-22 chromosome, complete genomeExonuclease RNase T and DNA polymerase III9e-0753.9
NC_008322:2637646:265401326540132654741729Shewanella sp. MR-7, complete genomeDNA polymerase III, epsilon subunit8e-0753.9
NC_008321:2569315:258567025856702586398729Shewanella sp. MR-4, complete genomeDNA polymerase III, epsilon subunit8e-0753.9
NC_010520:2585014:2616121261612126204194299Clostridium botulinum A3 str. Loch Maree, complete genomeDNA polymerase III, alpha subunit, Gram-positive type8e-0753.9
NC_004347:2668000:268937626893762690104729Shewanella oneidensis MR-1, complete genomeDNA polymerase III, epsilon subunit7e-0753.9
NC_014311:1545175:154795115479511548679729Ralstonia solanacearum PSI07 chromosome, complete genomeDNA polymerase III epsilon subunit7e-0753.9
NC_007484:667879:682483682483683100618Nitrosococcus oceani ATCC 19707, complete genomeExonuclease7e-0753.9
NC_009253:2139379:2156194215619421604744281Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA polymerase III subunit alpha9e-0753.5
NC_014960:1697818:1714903171490317177072805Anaerolinea thermophila UNI-1, complete genomeDnaQ exonuclease/DinG helicase family protein1e-0653.1
NC_007384:1355060:138151613815161382178663Shigella sonnei Ss046, complete genomehypothetical protein2e-0652.4
NC_016822:1339058:136436513643651365027663Shigella sonnei 53G, complete genomeexodeoxyribonuclease X2e-0652.4
NC_021066:2226826:224604422460442246703660Raoultella ornithinolytica B6, complete genomeexodeoxyribonuclease X3e-0652
NC_020453:896458:9170169170169191782163Agromonas oligotrophica S58 DNA, complete genomehypothetical protein3e-0651.6
NC_012658:2584355:2611499261149926157974299Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA polymerase III PolC4e-0651.6
NC_008313:2685531:268771026877102688450741Ralstonia eutropha H16 chromosome 1, complete sequenceDNA polymerase III epsilon subunit9e-0650.4