Pre_GI Gene

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Host: NC_006155 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006155:2208686 Yersinia pseudotuberculosis IP 32953, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
220868622112412556putative phage replication proteinQuickGO ontologyBLASTP
22113302212148819putative DNA adenine methylaseQuickGO ontologyBLASTP
22121452212798654similar to Orf81 bacteriophage 186QuickGO ontologyBLASTP
22128552213622768hypothetical proteinBLASTP
22137052214013309hypothetical proteinBLASTP
22140412214301261hypothetical proteinBLASTP
22144432214757315hypothetical proteinBLASTP
22149722215175204putative DNA-binding proteinQuickGO ontologyBLASTP
22154402215808369putative prophage transcriptional regulatorQuickGO ontologyBLASTP
221582922175261698similar to hypothetical proteinQuickGO ontologyBLASTP
22175472217966420putative bacteriophage integraseQuickGO ontologyBLASTP
22180352218415381hypothetical proteinBLASTP
22184152218747333putative bacteriophage integraseQuickGO ontologyBLASTP
22190412219418378putative prophage integraseQuickGO ontologyBLASTP
22211092221255147hypothetical proteinBLASTP
22220762222318243hypothetical protein
22223442222688345hypothetical proteinBLASTP
22229082223867960putative transposaseQuickGO ontologyBLASTP
22239392224358420hypothetical proteinBLASTP
222528822266461359possible MFS Superfamliy multidrug-efflux transporterQuickGO ontologyBLASTP
222664322283761734possible ThiF familyQuickGO ontologyBLASTP
22283662229091726hypothetical proteinBLASTP
22290792229933855hypothetical proteinBLASTP
22299182230730813hypothetical proteinBLASTP
223072722318931167possible diaminopimelate decarboxylaseQuickGO ontologyBLASTP
22318682232425558putative similar to ribosomal-protein-alanine N-acetyltransfeQuickGO ontologyBLASTP