Pre_GI: BLASTP Hits

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Query: NC_010001:109893:122755 Clostridium phytofermentans ISDg, complete genome

Start: 122755, End: 124488, Length: 1734

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010320:671699:6831316831316848731743Thermoanaerobacter sp. X514 chromosome, complete genomeputative PAS/PAC sensor protein1e-130467
NC_015958:1983815:1989439198943919911661728Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeputative PAS/PAC sensor protein2e-130466
NC_010321:244371:2530382530382547711734Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehydrogenase5e-130464
NC_019978:7535:2927929279309671689Halobacteroides halobius DSM 5150, complete genomeiron only hydrogenase large subunit5e-114412
NC_014824:133065:1436251436251453011677Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceputative PAS/PAC sensor protein5e-108392
NC_015589:2555000:2555101255510125568131713Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePAS fold domain-containing protein1e-99364
NC_007503:1383255:1383255138325513854532199Carboxydothermus hydrogenoformans Z-2901, complete genomesigma-54 dependent transcriptional regulator6e-65248
NC_015578:1038588:1043196104319610449471752Treponema primitia ZAS-2 chromosome, complete genomeferredoxin 21e-63244
NC_016584:3826300:3826300382630038291252826Desulfosporosinus orientis DSM 765 chromosome, complete genomesignal transduction histidine kinase2e-41170
NC_009698:3647955:3669220366922036705691350Clostridium botulinum A str. Hall chromosome, complete genome[Fe] hydrogenase1e-32141
NC_010516:3845942:3867259386725938686081350Clostridium botulinum B1 str. Okra, complete genome[Fe] hydrogenase7e-32139
NC_010424:448865:4541674541674556241458Candidatus Desulforudis audaxviator MP104C, complete genomehydrogenase large subunit domain protein1e-30134
NC_014328:2203437:2203437220343722047831347Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Iron only hydrogenase large subunit1e-30134
NC_016627:1485799:1512139151213915134731335Clostridium clariflavum DSM 19732 chromosome, complete genomeiron only hydrogenase large subunit2e-29130
NC_010644:485966:5097615097615111971437Elusimicrobium minutum Pei191, complete genomehydrogenase large subunit3e-29130
NC_015949:2327500:2327610232761023294811872Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomemethyl-accepting chemotaxis sensory transducer5e-29129
NC_015958:1983815:2002191200219120037321542Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase large subunit domain-containing protein9e-29128
NC_013522:698114:7273897273897286931305Thermanaerovibrio acidaminovorans DSM 6589, complete genomeFe-S cluster domain protein1e-28128
NC_015389:1298689:1320798132079813223511554Coriobacterium glomerans PW2 chromosome, complete genomehydrogenase large subunit domain protein1e-26121
NC_014824:133065:1464801464801479161437Ruminococcus albus 7 plasmid pRUMAL01, complete sequencehydrogenase large subunit domain protein2e-26121
NC_013203:472679:4744474744474760421596Atopobium parvulum DSM 20469, complete genomeFerredoxin hydrogenase3e-26120
NC_014328:2203437:2216007221600722179231917Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator3e-26120
NC_015425:2072703:2098141209814121000301890Clostridium botulinum BKT015925 chromosome, complete genometranscriptional regulator6e-26119
NC_020134:2832857:2836197283619728375851389Clostridium stercorarium subsp. stercorarium DSM 8532, completehydrogenase large subunit domain protein2e-25117
NC_020291:491000:5095775095775110641488Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeferredoxin hydrogenase2e-24114
NC_015425:2389400:2403109240310924045931485Clostridium botulinum BKT015925 chromosome, complete genomeFe-hydrogenase large subunit family protein2e-24114
NC_010520:3580000:3589336358933635908291494Clostridium botulinum A3 str. Loch Maree, complete genome[Fe] hydrogenase7e-24112
NC_009617:385000:3941173941173956071491Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeferredoxin hydrogenase9e-24112
NC_009697:3463736:3488121348812134896141494Clostridium botulinum A str. ATCC 19397 chromosome, complete[Fe] hydrogenase2e-23111
NC_009699:3581376:3605767360576736072601494Clostridium botulinum F str. Langeland chromosome, complete genome[Fe] hydrogenase2e-23111
NC_017297:3594000:3604382360438236058751494Clostridium botulinum F str. 230613 chromosome, complete genome[Fe] hydrogenase2e-23111
NC_009495:3502000:3512133351213335136291497Clostridium botulinum A str. ATCC 3502 chromosome, complete genome[Fe] hydrogenase2e-23111
NC_006138:2683545:2717282271728227187331452Desulfotalea psychrophila LSv54, complete genomesimilar to hydrogenase1e-23111
NC_015577:3735558:3735558373555837376452088Treponema azotonutricium ZAS-9 chromosome, complete genome4Fe-4S binding domain-containing protein1e-23111
NC_010723:371741:3830613830613845451485Clostridium botulinum E3 str. Alaska E43, complete genomeiron-dependent hydrogenase3e-23110
NC_010674:370629:3876673876673891511485Clostridium botulinum B str. Eklund 17B, complete genomeiron-dependent hydrogenase3e-23110
NC_011297:767333:7717067717067730371332Dictyoglomus thermophilum H-6-12, complete genomeferredoxin 23e-23110
NC_011661:938754:9431119431119444421332Dictyoglomus turgidum DSM 6724, complete genomeFe-S cluster domain protein4e-23110
NC_008593:2136759:2146548214654821480321485Clostridium novyi NT, complete genomeFe-hydrogenase large subunit family protein5e-23109
NC_014364:3500041:3519450351945035209641515Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehydrogenase large subunit domain protein1e-22108
NC_010001:109893:1200331200331214871455Clostridium phytofermentans ISDg, complete genomeFerredoxin hydrogenase1e-22108
NC_004557:2552418:2556219255621925577031485Clostridium tetani E88, complete genomeperiplasmic [Fe] hydrogenase 12e-22107
NC_012563:3729817:3754207375420737557001494Clostridium botulinum A2 str. Kyoto, complete genome[Fe] hydrogenase2e-21104
NC_007907:960104:9669189669189681951278Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-20102
NC_014377:532816:5487185487185504181701Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNAD(P)-dependent iron-only hydrogenase catalytic subunit2e-20101
NC_010001:109893:1154371154371171401704Clostridium phytofermentans ISDg, complete genomehydrogenase, Fe-only7e-1995.9
NC_008262:297960:3212573212573226061350Clostridium perfringens SM101, complete genomeHydrogenase subunit (ferredoxin)5e-1893.2
NC_008261:304000:3265183265183278671350Clostridium perfringens ATCC 13124, complete genome[Fe] hydrogenase1e-1792
NC_019978:2260395:2284480228448022862071728Halobacteroides halobius DSM 5150, complete genomehydrogenase, Fe-only1e-1688.6
NC_015519:2605709:2613464261346426154431980Tepidanaerobacter sp. Re1 chromosome, complete genomehydrogenase, Fe-only2e-1687.4
NC_016627:1485799:1518304151830415200791776Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase, Fe-only5e-1686.7
NC_008261:2920999:2926027292602729277451719Clostridium perfringens ATCC 13124, complete genomeiron hydrogenase1e-1585.1
NC_013315:3689422:3708153370815337095291377Clostridium difficile CD196 chromosome, complete genomehydrogenase1e-1585.1
NC_016012:879972:8821658821658839011737Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeiron hydrogenase3e-1480.9
NC_013385:1758383:1776695177669517784311737Ammonifex degensii KC4, complete genomehydrogenase, Fe-only2e-1378.2
NC_013385:1758383:1778719177871917804701752Ammonifex degensii KC4, complete genomehydrogenase, Fe-only3e-1377.4
NC_012778:207415:2259602259602276421683Eubacterium eligens ATCC 27750, complete genomeNADH dehydrogenase I chain G7e-1375.9
NC_007519:64157:7582175821770861266Desulfovibrio alaskensis G20 chromosome, complete genomeferredoxin hydrogenase3e-1274.3
NC_011830:2177187:2194046219404621974983453Desulfitobacterium hafniense DCB-2, complete genomehydrogenase, Fe-only7e-1272.8
NC_013740:2141523:2158428215842821601581731Acidaminococcus fermentans DSM 20731, complete genomehydrogenase, Fe-only2e-1068.2
NC_010334:1701957:1701957170195717031891233Shewanella halifaxensis HAW-EB4, complete genomehydrogenase, Fe-only2e-1067.8
NC_004663:107019:1132011132011149671767Bacteroides thetaiotaomicron VPI-5482, complete genomeNADH:ubiquinone oxidoreductase subunit7e-1066.2
NC_016048:1602500:1603093160309316047871695Oscillibacter valericigenes Sjm18-20, complete genomeputative uptake hydrogenase subunit HupA4e-0963.5
NC_020291:2701149:2703814270381427051871374Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome[FeFe] hydrogenase, group A2e-0861.6
NC_021182:4058873:406031340603134061218906Clostridium pasteurianum BC1, complete genomeglycyl-radical enzyme activator family protein2e-0654.7