Pre_GI: BLASTP Hits

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Query: NC_009664:1569335:1611526 Kineococcus radiotolerans SRS30216, complete genome

Start: 1611526, End: 1612593, Length: 1068

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:5957657:5960568596056859616621095Streptomyces avermitilis MA-4680, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-70266
NC_021177:4912982:4912982491298249141121131Streptomyces fulvissimus DSM 40593, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-70266
NC_010572:3363830:3384178338417833852331056Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative UDP-N-acetylenolpyruvoylglucosamine reductase4e-70265
NC_003888:5042283:5067001506700150681521152Streptomyces coelicolor A3(2), complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-69263
NC_013174:601434:6151426151426164041263Jonesia denitrificans DSM 20603, complete genomeUDP-N-acetylmuramate dehydrogenase6e-69261
NC_016109:3591401:3611870361187036129101041Kitasatospora setae KM-6054, complete genomeputative UDP-N-acetylenolpyruvoylglucosamine reductase6e-69261
NC_018750:4688968:4688968468896846900261059Streptomyces venezuelae ATCC 10712, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase8e-69261
NC_013929:4186840:4202998420299842040531056Streptomyces scabiei 87.22 chromosome, complete genomeUDP-N-acetylmuramate dehydrogenase9e-68257
NC_015957:639774:6607546607546618091056Streptomyces violaceusniger Tu 4113 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-67256
NC_010162:10894592:1089855210898552108997241173Sorangium cellulosum 'So ce 56', complete genomeUDP-N-acetylmuramate dehydrogenase2e-54213
NC_004369:437594:4509944509944526851692Corynebacterium efficiens YS-314, complete genomeputative UDP-N-acetylenolpyruvoylglucosamine reductase9e-51201
NC_010612:957786:9699809699809710801101Mycobacterium marinum M, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase MurB5e-50198
NC_020133:902000:9136969136969147961101Mycobacterium liflandii 128FXT, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase MurB7e-50197
NC_012590:284793:3011353011353022531119Corynebacterium aurimucosum ATCC 700975, complete genomeUDP-N-acetylmuramate dehydrogenase6e-41168
NC_016109:3591401:3630755363075536318401086Kitasatospora setae KM-6054, complete genomeputative UDP-N-acetylenolpyruvoylglucosamine reductase5e-41168
NC_020541:2551539:2575121257512125761701050Rhodanobacter sp. 2APBS1, complete genomeUDP-N-acetylmuramate dehydrogenase2e-36153
NC_010571:3322467:3324908332490833259361029Opitutus terrae PB90-1, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase6e-35148
NC_009615:1305678:1327906132790613289191014Parabacteroides distasonis ATCC 8503 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-30134
NC_015164:1120288:1129299112929911303091011Bacteroides salanitronis DSM 18170 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-28127
NC_010688:2850164:2869045286904528700971053Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-27124
NC_012660:4149487:4164606416460641656251020Pseudomonas fluorescens SBW25 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-27123
NC_007508:2072738:2071689207168920727411053Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-27123
NC_007086:2887875:2962859296285929639111053Xanthomonas campestris pv. campestris str. 8004, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-27122
NC_013722:1425588:1424551142455114255911041Xanthomonas albilineans, complete genomeprobable udp-n-acetylenolpyruvoylglucosamine reductase protein1e-23111
NC_010170:1580832:1595859159585915969201062Bordetella petrii, complete genomeUDP-N-acetylmuramate dehydrogenase3e-23109
NC_011750:4543135:4551902455190245529301029Escherichia coli IAI39 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-21104
NC_010468:4455201:4459244445924444602721029Escherichia coli ATCC 8739, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-21103
NC_000913:4159090:4170080417008041711081029Escherichia coli K12, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase4e-21102
NC_010473:4256000:4269777426977742708051029Escherichia coli str. K-12 substr. DH10B, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding4e-21102
NC_007946:3683371:3692025369202536930531029Escherichia coli UTI89, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-21102
NC_003228:3323832:332465133246513325649999Bacteroides fragilis NCTC 9343, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase6e-21101
NC_016776:3356718:335926733592673360265999Bacteroides fragilis 638R, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase7e-21101
NC_006347:3390193:339101233910123392010999Bacteroides fragilis YCH46, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase7e-21101
CU928160:4248621:4261202426120242622301029Escherichia coli IAI1 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding2e-2099.8
NC_016147:2266419:2267762226776222688021041Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase5e-2099
NC_004344:589375:5911845911845922061023Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein9e-2097.8
NC_011834:31206:4899448994500641071Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,UDP-N-acetylenolpyruvoylglucosamine reductase1e-1997.4
NC_004545:15650:5139551395523991005Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1997.4
NC_017255:31211:4899948999501141116Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,UDP-N-acetylenolpyruvoylglucosamine reductase2e-1997.1
NC_017252:31215:4900149001501161116Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,UDP-N-acetylenolpyruvoylglucosamine reductase2e-1997.1
NC_002528:31191:4898148981500511071Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1996.7
NC_003198:3586000:3593509359350935945371029Salmonella enterica subsp. enterica serovar Typhi str. CT18,UDP-N-acetylenolpyruvoylglucosamine reductase3e-1996.3
NC_015276:2171355:2176574217657421775871014Marinomonas mediterranea MMB-1 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase5e-1995.5
NC_017253:31192:4898048980500951116Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,UDP-N-acetylenolpyruvoylglucosamine reductase6e-1995.1
NC_014909:219498:2235832235832246231041Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase7e-1995.1
NC_011833:31192:4897848978500481071Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,UDP-N-acetylenolpyruvoylglucosamine reductase9e-1994.7
NC_005125:2456889:248204024820402482933894Gloeobacter violaceus PCC 7421, complete genomeUDP-N-acetylenolpyruvylglucosamine reductase2e-1893.6
NC_006511:4119332:4130301413030141313291029Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCUDP-N-acetylenolpyruvoylglucosamine reductase3e-1893.2
NC_014033:675626:6882346882346892351002Prevotella ruminicola 23 chromosome, complete genomeUDP-N-acetylmuramate dehydrogenase3e-1893.2
NC_009446:473960:475546475546476538993Dichelobacter nodosus VCS1703A, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-1892.8
NC_016048:1930089:196709319670931968013921Oscillibacter valericigenes Sjm18-20, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1687
NC_011184:2723000:2725168272516827262171050Vibrio fischeri MJ11 chromosome I, complete sequenceUDP-N-acetylenolpyruvoylglucosamine reductase7e-1685.1
NC_014328:303063:327397327397328311915Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1584.3
NC_017259:25400:4823348233492941062Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,UDP-N-acetylenolpyruvoylglucosamine reductase2e-1584
NC_016632:1637500:1659729165972916607991071Serratia symbiotica str. 'Cinara cedri' chromosome, completeUDP-N-acetylenolpyruvoylglucosamine reductase3e-1583.2
NC_013939:441921:456779456779457642864Deferribacter desulfuricans SSM1, complete genomeUDP-N-acetylmuramate dehydrogenase6e-1582
NC_004113:350059:367390367390368295906Thermosynechococcus elongatus BP-1, complete genomeUDP-N-acetylenolpyruvylglucosamine reductase1e-1481.3
NC_010001:404066:413478413478414410933Clostridium phytofermentans ISDg, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase4e-1479.3
NC_008262:381323:402987402987403901915Clostridium perfringens SM101, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1377.4
NC_014109:393500:413410413410414405996Candidatus Riesia pediculicola USDA chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-1376.3
NC_004061:31500:4907849078501121035Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase6e-1375.5
NC_015949:2156843:217680021768002177744945Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1274.3
NC_016893:218376:240068240068240970903Wigglesworthia glossinidia endosymbiont of Glossina morsitansFAD-binding UDP-N-acetylenolpyruvoylglucosamine reductase1e-1274.3
NC_014721:314990:317787317787318731945Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeudp-n-acetylenolpyruvoylglucosamine reductase2e-1273.9
NC_015672:1921023:192730619273061928166861Flexistipes sinusarabici DSM 4947 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1273.2
NC_011725:3928853:393142939314293932334906Bacillus cereus B4264 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-1273.2
NC_017208:3928161:392902839290283929933906Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeUDP-N-acetylenolpyruvoylglucosamine reductase6e-1272
NC_016771:3665773:366835036683503669255906Bacillus cereus NC7401, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1171.2
NC_004722:3886800:388937638893763890281906Bacillus cereus ATCC 14579, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1171.2
NC_014171:3812247:381224738122473813152906Bacillus thuringiensis BMB171 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1171.2
NC_014335:3675456:367803336780333678938906Bacillus cereus biovar anthracis str. CI chromosome, completeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1170.5
NC_006274:3805134:380771138077113808616906Bacillus cereus E33L, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1170.5
NC_003997:3724702:372727237272723728177906Bacillus anthracis str. Ames, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1170.1
NC_007530:3724829:372739937273993728304906Bacillus anthracis str. 'Ames Ancestor', complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1170.1
NC_005945:3725397:372796737279673728872906Bacillus anthracis str. Sterne, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1170.1
NC_012659:3724729:372729937272993728204906Bacillus anthracis str. A0248, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1170.1
NC_004193:375416:587739587739588662924Oceanobacillus iheyensis HTE831, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1170.1
NC_016011:1419394:144121414412141442125912Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative UDP-N-acetylenolpyruvoylglucosamine reductase5e-1168.9
NC_011969:3657360:365993736599373660842906Bacillus cereus Q1 chromosome, complete genomeudp-N-acetylenolpyruvoylglucosamine reductase6e-1168.9
NC_015966:2875140:2884302288430228853271026Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase6e-1168.9
NC_011772:3896635:389745638974563898361906Bacillus cereus G9842, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase8e-1168.2
NC_009494:3119997:312560131256013126527927Legionella pneumophila str. Corby chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1068.2
NC_014125:3054000:305960630596063060517912Legionella pneumophila 2300/99 Alcoy chromosome, complete genomeUDP-N-acetylmuramate dehydrogenase1e-1067.8
NC_002942:2943206:294881029488102949748939Legionella pneumophila subsp. pneumophila str. Philadelphia 1,UDP-N-acetylenolpyruvoylglucosamine reductase1e-1067.8
NC_016811:2903871:290947529094752910413939Legionella pneumophila subsp. pneumophila ATCC 43290 chromosome,UDP-N-acetylenolpyruvoylglucosamine reductase1e-1067.8
NC_006369:2888701:289314328931432894069927Legionella pneumophila str. Lens, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1067.8
NC_003450:359759:3748333748333758401008Corynebacterium glutamicum ATCC 13032, complete genomeUDP-N-acetylmuramate dehydrogenase1e-1067.4
NC_006958:359760:3748343748343758411008Corynebacterium glutamicum ATCC 13032, complete genomeUDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE1e-1067.4
NC_005957:3746891:374946837494683750373906Bacillus thuringiensis serovar konkukian str. 97-27, completeUDP-N-acetylenolpyruvoylglucosamine reductase1e-1067.4
NC_012778:2049694:205908220590822060017936Eubacterium eligens ATCC 27750, complete genomeUDP-N-acetylmuramate dehydrogenase2e-1067.4
NC_014315:226693:237530237530238429900Nitrosococcus watsoni C-113 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-1067
NC_005061:214168:2169842169842180211038Candidatus Blochmannia floridanus, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase4e-1065.9
NC_003454:2113464:213576421357642136609846Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeUDP-N-acetylenolpyruvoylglucosamine reductase6e-1065.5
NC_007484:3231937:323763332376333238529897Nitrosococcus oceani ATCC 19707, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase8e-1065.1
NC_012781:629761:639492639492640436945Eubacterium rectale ATCC 33656, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase8e-1065.1
NC_014364:2322269:232375023237502324709960Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-0964.7
NC_016148:1021138:103947510394751040410936Thermovirga lienii DSM 17291 chromosome, complete genomeUDP-N-acetylmuramate dehydrogenase1e-0964.7
NC_006368:3028286:303607030360703036981912Legionella pneumophila str. Paris, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase9e-1064.7
NC_013861:3215640:322592632259263226837912Legionella longbeachae NSW150, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-0964.3
NC_012918:2850755:2870372287037228713731002Geobacter sp. M21 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-0963.9
NC_013960:489616:505086505086505982897Nitrosococcus halophilus Nc4 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-0963.5
NC_017059:3163319:3186722318672231878221101Rhodospirillum photometricum DSM 122, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase3e-0963.2
NC_012225:1071159:108358310835831084488906Brachyspira hyodysenteriae WA1, complete genomeUDP-N-acetylmuramate dehydrogenase7e-0962
NC_018697:361339:378792378792379694903Cycloclasticus sp. P1 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase2e-0860.5
NC_020419:923949:935326935326936198873Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeUDP-N-acetylmuramate dehydrogenase7e-0858.5
NS_000191:923949:935326935326936198873Uncultured Termite group 1 bacterium phylotype Rs-D17, completeUDP-N-acetylmuramate dehydrogenase7e-0858.5
NC_015164:3210885:322174832217483222701954Bacteroides salanitronis DSM 18170 chromosome, complete genomeFAD linked oxidase domain-containing protein8e-0858.5
NC_014844:3015738:301486030148603015741882Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase1e-0654.3
NC_008789:835909:844489844489845430942Halorhodospira halophila SL1, complete genomeUDP-N-acetylenolpyruvoylglucosamine reductase6e-0652