Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:404066 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
404066404515450peptidase A8 signal peptidase IIQuickGO ontologyBLASTP
4046944062981605CTP synthaseQuickGO ontologyBLASTP
4068984089432046ATP-dependent metalloprotease FtsHQuickGO ontologyBLASTP
4091624110481887excinuclease ABC C subunitQuickGO ontologyBLASTP
411257412186930HPr kinaseQuickGO ontologyBLASTP
412380413318939glucokinase ROK familyQuickGO ontologyBLASTP
413478414410933UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
414428415309882hypothetical proteinBLASTP
415316416257942protein of unknown function DUF199QuickGO ontologyBLASTP
416274416531258Phosphotransferase system phosphocarrier protein HPrQuickGO ontologyBLASTP
4168554182461392hypothetical proteinBLASTP
4184484220083561DNA polymerase III alpha subunitQuickGO ontologyBLASTP
42239942342410266-phosphofructokinaseQuickGO ontologyBLASTP