Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1749227 Thermobifida fusca YX, complete genome

Start: 1749227, End: 1750633, Length: 1407

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:1445369:1464300146430014656851386Kitasatospora setae KM-6054, complete genomeputative uracil permease1e-118427
NC_021064:1789980:1789980178998017914641485Propionibacterium avidum 44067, complete genomeuracil-xanthine permease8e-100364
NC_007384:1086025:1104435110443511058291395Shigella sonnei Ss046, complete genomeputative transport protein1e-71271
NC_016799:1439000:1497098149709814983841287Corynebacterium diphtheriae 31A chromosome, complete genomeputative transport membrane protein9e-71268
NC_014924:2840310:2840310284031028416051296Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeuracil-xanthine permease1e-70268
NC_016786:1359064:1445560144556014468461287Corynebacterium diphtheriae HC01 chromosome, complete genomeputative transport membrane protein2e-70267
NC_016802:1317365:1430082143008214313681287Corynebacterium diphtheriae HC02 chromosome, complete genomeputative transport membrane protein1e-70267
NC_016783:1397975:1465887146588714671731287Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative transport membrane protein2e-70266
NC_016785:1407892:1423462142346214247481287Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative transport membrane protein4e-70266
NC_016801:1422500:1487077148707714883631287Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative transport membrane protein2e-69263
NC_015671:3153325:3172534317253431739131380Cellvibrio gilvus ATCC 13127 chromosome, complete genomeuracil-xanthine permease3e-64246
NC_006087:885760:9060059060059072821278Leifsonia xyli subsp. xyli str. CTCB07, complete genomexanthine/uracil permease7e-64244
NC_014246:676570:6928526928526942761425Mobiluncus curtisii ATCC 43063 chromosome, complete genomeNCS2 family nucleobase:cation symporter-27e-61235
NC_010407:3132683:3152400315240031536411242Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative nucleotide permease6e-60231
NC_017208:3897253:3910933391093339122251293Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeUracil permease7e-49195
NC_012472:3743473:3757156375715637584391284Bacillus cereus 03BB102, complete genomeuracil permease6e-48192
NC_016779:3660000:3674988367498836762711284Bacillus cereus F837/76 chromosome, complete genomeUracil permease6e-48192
NC_003909:3671468:3687114368711436883971284Bacillus cereus ATCC 10987, complete genomeuracil permease6e-48192
NC_016771:3633327:3650201365020136514841284Bacillus cereus NC7401, complete genomeuracil permease6e-48192
NC_011969:3627980:3641662364166236429451284Bacillus cereus Q1 chromosome, complete genomeuracil permease6e-48192
NC_011658:3680829:3697703369770336989861284Bacillus cereus AH187 chromosome, complete genomeuracil permease6e-48192
NC_011773:3729500:3743915374391537451981284Bacillus cereus AH820 chromosome, complete genomeuracil permease7e-48192
NC_014335:3645500:3659882365988236611651284Bacillus cereus biovar anthracis str. CI chromosome, completeuracil-xanthine permease7e-48192
NC_007530:3694940:3709256370925637105391284Bacillus anthracis str. 'Ames Ancestor', complete genomeuracil permease6e-48192
NC_003997:3692776:3709129370912937104121284Bacillus anthracis str. Ames, complete genomeuracil permease6e-48192
NC_005945:3693471:3709824370982437111401317Bacillus anthracis str. Sterne, complete genomeuracil permease4e-48192
NC_006274:3773335:3789565378956537908811317Bacillus cereus E33L, complete genomeuracil permease4e-48192
NC_008600:3724312:3739844373984437411601317Bacillus thuringiensis str. Al Hakam, complete genomeuracil permease5e-48192
NC_005957:3716487:3731323373132337326391317Bacillus thuringiensis serovar konkukian str. 97-27, completeuracil permease5e-48192
NC_004722:3855326:3871287387128738726331347Bacillus cereus ATCC 14579, complete genomeUracil permease5e-48192
NC_017200:3737185:3753996375399637552791284Bacillus thuringiensis serovar finitimus YBT-020 chromosome,uracil permease6e-48192
NC_012659:3692803:3709156370915637104391284Bacillus anthracis str. A0248, complete genomeuracil permease6e-48192
NC_012581:519969:5281485281485294311284Bacillus anthracis str. CDC 684 chromosome, complete genomeuracil permease6e-48192
NC_011772:3863166:3879416387941638806991284Bacillus cereus G9842, complete genomeuracil permease1e-47191
NC_011725:3897450:3913341391334139146241284Bacillus cereus B4264 chromosome, complete genomeuracil permease7e-48191
NC_014171:3779956:3794161379416137954441284Bacillus thuringiensis BMB171 chromosome, complete genomeuracil permease7e-48191
NC_010184:3757000:3769196376919637704881293Bacillus weihenstephanensis KBAB4, complete genomeuracil-xanthine permease2e-47190
NC_009674:2624817:2640222264022226415051284Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeuracil-xanthine permease4e-46186
NC_011999:813978:8279338279338292431311Macrococcus caseolyticus JCSC5402, complete genomeuracil permease2e-45184
NC_009718:1183816:1190317119031711915641248Fervidobacterium nodosum Rt17-B1, complete genomeuracil-xanthine permease4e-44179
NC_015873:238187:2525542525542538191266Megasphaera elsdenii DSM 20460, complete genomeputative uracil permease5e-42172
NC_014209:2257316:2273956227395622751851230Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,uracil-xanthine permease2e-41171
NC_014964:2301835:2317113231711323183421230Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeuracil-xanthine permease7e-42171
NC_014538:2396559:2413493241349324147221230Thermoanaerobacter sp. X513 chromosome, complete genomeuracil-xanthine permease7e-42171
NC_010320:2397395:2414329241432924155581230Thermoanaerobacter sp. X514 chromosome, complete genomeuracil-xanthine permease7e-42171
NC_010321:2319820:2335098233509823363271230Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeuracil-xanthine permease7e-42171
NC_009848:1494253:1499895149989515012231329Bacillus pumilus SAFR-032, complete genomeNCS2 family nucleobase:cation symporter-22e-41170
NC_009922:944538:9485639485639497951233Alkaliphilus oremlandii OhILAs, complete genomeuracil-xanthine permease6e-41168
NC_014328:2588994:2594779259477925961041326Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative uracil permease2e-40167
NC_015516:1222632:1239396123939612406761281Melissococcus plutonius ATCC 35311, complete genomeuracil permease1e-40167
NC_007350:1629694:1642236164223616435431308Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,uracil permease8e-40165
NC_016011:1910638:1923693192369319249791287Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative uracil permease1e-39164
NC_013921:2375900:2392537239253723937661230Thermoanaerobacter italicus Ab9 chromosome, complete genomeuracil-xanthine permease1e-39164
NC_002570:2649759:2664588266458826659221335Bacillus halodurans C-125, complete genomeuracil transporter (permease)4e-39162
NC_008555:1874878:1890116189011618914021287Listeria welshimeri serovar 6b str. SLCC5334, complete genomeuracil permease8e-39161
NC_017138:980696:9862699862699875761308Bacillus megaterium WSH-002 chromosome, complete genomeUracil permease (Uracil transporter)4e-38159
NC_014019:4094750:4106180410618041074871308Bacillus megaterium QM B1551 chromosome, complete genomeuracil permease4e-38159
NC_013891:1861294:1874350187435018756361287Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeuracil permease6e-38159
NC_011660:724711:7267657267657280511287Listeria monocytogenes HCC23 chromosome, complete genomeuracil permease6e-38158
NC_013768:1983711:2001352200135220026381287Listeria monocytogenes 08-5923, complete genomehypothetical protein7e-38158
NC_003212:1958500:1970567197056719718531287Listeria innocua Clip11262, complete genomepyrP1e-37158
NC_002973:1877905:1895542189554218968281287Listeria monocytogenes str. 4b F2365, complete genomeuracil permease1e-37157
NC_003210:1904152:1916166191616619174521287Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-37157
NC_015425:2072703:2074324207432420756011278Clostridium botulinum BKT015925 chromosome, complete genomeuracil-xanthine permease6e-37155
NC_020418:2718500:2735423273542327367121290Morganella morganii subsp. morganii KT, complete genomeUracil permease5e-37155
NC_009633:712500:7251157251157263561242Alkaliphilus metalliredigens QYMF chromosome, complete genomeuracil-xanthine permease1e-36154
NC_009434:3413461:3423568342356834248271260Pseudomonas stutzeri A1501, complete genomeuracil permease6e-36152
NC_017167:2203159:2208749220874922099841236Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1uracil-xanthine permease3e-32140
NC_019978:875941:8900808900808913751296Halobacteroides halobius DSM 5150, complete genomeuracil-xanthine permease4e-32139
NC_016629:3543432:3560901356090135621391239Desulfovibrio africanus str. Walvis Bay chromosome, completeuracil-xanthine permease7e-31135
NC_009481:845500:8646498646498659891341Synechococcus sp. WH 7803 chromosome, complete genomeUracil permease7e-29128
NC_021171:1354000:1356849135684913581441296Bacillus sp. 1NLA3E, complete genomeuracil-xanthine permease2e-28127
NC_016751:1740265:1748213174821317495141302Marinitoga piezophila KA3 chromosome, complete genomeuracil-xanthine permease2e-28127
NC_010519:275976:3009353009353021761242Haemophilus somnus 2336 chromosome, complete genomeuracil-xanthine permease1e-28127
NC_014831:1763408:1765850176585017672021353Thermaerobacter marianensis DSM 12885 chromosome, complete genomeXanthine/uracil/vitamin C permease1e-21104
NC_014106:244831:2448312448312461171287Lactobacillus crispatus ST1, complete genomeXanthine permease1e-1791.7
NC_008054:245184:2495092495092508011293Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeXanthine permease7e-1789
NC_015680:841783:8608718608718621421272Pyrococcus yayanosii CH1 chromosome, complete genomeuracil/xanthine permease1e-1688.2
NC_017186:361444:3978003978003991311332Amycolatopsis mediterranei S699 chromosome, complete genomexanthine/uracil permease1e-1585.1
NC_014318:381384:3977873977873991181332Amycolatopsis mediterranei U32 chromosome, complete genomexanthine/uracil permease1e-1585.1
NC_010723:575254:5973815973815987781398Clostridium botulinum E3 str. Alaska E43, complete genomexanthine permease2e-1584.3
NC_017179:3540739:3550653355065335520051353Clostridium difficile BI1, complete genomexanthine permease5e-1582.8
NC_013315:3532721:3542635354263535439871353Clostridium difficile CD196 chromosome, complete genomexanthine permease5e-1582.8
NC_015391:2099472:2112547211254721139531407Carnobacterium sp. 17-4 chromosome, complete genomexanthine permease1e-1481.3
NC_016642:757964:7747457747457761901446Pseudovibrio sp. FO-BEG1 chromosome, complete genomexanthine/uracil permease family protein3e-1480.5
NC_006138:1571878:1576724157672415780971374Desulfotalea psychrophila LSv54, complete genomesimilar to xanthine permease5e-1479.3
NC_019978:1022209:1030678103067810320091332Halobacteroides halobius DSM 5150, complete genomexanthine permease9e-1478.6
NC_017080:2995001:3000923300092330023321410Phycisphaera mikurensis NBRC 102666, complete genomeputative transporter2e-1377.4
NC_014150:2994000:2997594299759429989761383Brachyspira murdochii DSM 12563 chromosome, complete genomeuracil-xanthine permease6e-1375.9
NC_014622:5553628:5565927556592755672341308Paenibacillus polymyxa SC2 chromosome, complete genomexanthine permease1e-1275.1
NC_019908:2401577:2426123242612324275021380Brachyspira pilosicoli P43/6/78 chromosome, complete genomeuracil permease UraA1e-1275.1
NC_014330:768232:7936017936017949801380Brachyspira pilosicoli 95/1000 chromosome, complete genomeuracil permease UraA1e-1275.1
NC_018607:2111581:2136617213661721379961380Brachyspira pilosicoli B2904 chromosome, complete genomeuracil permease UraA1e-1275.1
NC_018604:2253539:2256380225638022577681389Brachyspira pilosicoli WesB complete genomeuracil permease UraA1e-1275.1
NC_013410:2037840:2040974204097420422781305Fibrobacter succinogenes subsp. succinogenes S85 chromosome,xanthine permease3e-1273.6
NC_010002:2293670:2311084231108423125711488Delftia acidovorans SPH-1, complete genomexanthine permease4e-1273.2
NC_015563:5162177:5165635516563551671221488Delftia sp. Cs1-4 chromosome, complete genomexanthine permease3e-1273.2
NC_013967:2103968:2105839210583921072271389Haloferax volcanii DS2 chromosome, complete genomeXanthine permease2e-1171.2
NC_013406:1217385:1273188127318812745401353Paenibacillus sp. Y412MC10 chromosome, complete genomeXanthine/uracil/vitamin C permease3e-1170.1
NC_007644:2205599:2214131221413122154471317Moorella thermoacetica ATCC 39073, complete genomeuracil-xanthine permease3e-1170.1
NC_015738:2773552:2788967278896727903491383Eggerthella sp. YY7918, complete genomexanthine/uracil permease9e-1168.6
NC_008010:449652:4554764554764568551380Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceuracil-xanthine permease4e-1066.6
NC_013446:4182878:4183050418305041845371488Comamonas testosteroni CNB-2, complete genomeuracil-xanthine permease5e-1066.2
NC_017068:130226:1402751402751416361362Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative xanthine/uracil/vitamin C permease5e-1066.2
NC_012658:2393427:2393427239342723947701344Clostridium botulinum Ba4 str. 657 chromosome, complete genomexanthine/uracil permease family protein8e-1065.5
NC_009698:2265475:2265475226547522668181344Clostridium botulinum A str. Hall chromosome, complete genomexanthine/uracil permease2e-0964.3
NC_009697:2265409:2265409226540922667521344Clostridium botulinum A str. ATCC 19397 chromosome, completexanthine/uracil permease family protein2e-0964.3
NC_010501:3448389:3477001347700134783741374Pseudomonas putida W619, complete genomexanthine permease2e-0963.9
NC_017188:1172181:131304813130481313941894Bacillus amyloliquefaciens TA208 chromosome, complete genomexanthine permease4e-0963.2
NC_017191:1173989:131459513145951315518924Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein5e-0962.8
NC_017190:2130651:213866021386602139583924Bacillus amyloliquefaciens LL3 chromosome, complete genomexanthine permease5e-0962.8
NC_013956:4326388:4349766434976643511871422Pantoea ananatis LMG 20103 chromosome, complete genomeYicE1e-0758.5
NC_014729:1908086:1926338192633819279181581Halogeometricum borinquense DSM 11551 chromosome, complete genomexanthine/uracil permease4e-0756.6
NC_017243:2190000:2229656222965622309421287Brachyspira intermedia PWS/A chromosome, complete genomeXanthine/uracil permease5e-0756.2
NC_013716:4306695:4390220439022043916111392Citrobacter rodentium ICC168, complete genomeputative purine permease2e-0654.3
NC_008800:36500:4993349933513181386Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative membrane permease2e-0653.9
NC_012225:47800:6213662136634221287Brachyspira hyodysenteriae WA1, complete genomeXanthine/uracil permease3e-0653.5
CP002516:44744:6918069180705711392Escherichia coli KO11, complete genomeuracil-xanthine permease6e-0652.8
CP002185:4035502:4035502403550240368931392Escherichia coli W, complete genomepredicted transporter6e-0652.8
NC_016902:44744:6918069180705711392Escherichia coli KO11FL chromosome, complete genomeuracil-xanthine permease6e-0652.8
NC_004337:3590323:3799126379912638005171392Shigella flexneri 2a str. 301, complete genomeputative transport protein5e-0652.8
NC_010468:49074:6143761437628281392Escherichia coli ATCC 8739, complete genomeuracil-xanthine permease5e-0652.8
NC_013361:4959323:4972555497255549739461392Escherichia coli O26:H11 str. 11368 chromosome, complete genometransporter5e-0652.8
NC_016860:3964000:3964148396414839655391392Salmonella enterica subsp. enterica serovar Typhimurium struracil-xanthine permease7e-0652.4
NC_011094:3778000:3825593382559338269841392Salmonella enterica subsp. enterica serovar Schwarzengrund struracil-xanthine permease7e-0652.4
NC_009778:4014026:4017116401711640185221407Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-0652.4
NC_020260:4029951:4033051403305140344511401Cronobacter sakazakii Sp291, complete genomexanthine permease XanP7e-0652.4
NC_009615:1734752:1753101175310117544261326Parabacteroides distasonis ATCC 8503 chromosome, complete genomepurine permease8e-0652