Pre_GI: BLASTP Hits

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Query: NC_006905:4405301:4445397 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4445397, End: 4446086, Length: 690

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:4361238:440134144013414402030690Salmonella enterica subsp. enterica serovar Schwarzengrund strLrgB family protein7e-85313
NC_010067:3310336:331033633103363311025690Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-82303
NC_020181:3585898:359783835978383598527690Enterobacter aerogenes EA1509E, complete genomeCidA-associated membrane protein CidB1e-72272
NC_016612:1790256:179324617932461793935690Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLrgB family protein1e-68259
NC_008577:1015419:103154610315461032280735Shewanella sp. ANA-3 chromosome 1, complete sequenceLrgB family protein3e-22105
NC_010676:2793237:282841628284162829096681Burkholderia phytofirmans PsJN chromosome 2, complete sequenceLrgB family protein7e-21100
NC_015474:328500:335584335584336258675Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein1e-1687
NC_015172:3095781:311373931137393114434696Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeLrgB family protein8e-1684
NC_017200:3501500:352306335230633523740678Bacillus thuringiensis serovar finitimus YBT-020 chromosome,murein hydrolase export regulator1e-1583.6
NC_006274:3490598:351204435120443512721678Bacillus cereus E33L, complete genomemurein hydrolase export regulator2e-1582.8
NC_003909:3432073:345639534563953457072678Bacillus cereus ATCC 10987, complete genomehypothetical protein2e-1582.8
NC_012659:3416000:343261534326153433292678Bacillus anthracis str. A0248, complete genomehypothetical protein2e-1582.4
NC_012581:803456:805345805345806022678Bacillus anthracis str. CDC 684 chromosome, complete genomehypothetical protein2e-1582.4
NC_005957:3488021:350948935094893510166678Bacillus thuringiensis serovar konkukian str. 97-27, completemurein hydrolase export regulator2e-1582.4
NC_012472:3503000:352456135245613525238678Bacillus cereus 03BB102, complete genomehypothetical protein2e-1582.4
NC_003997:3414441:343258834325883433265678Bacillus anthracis str. Ames, complete genomehypothetical protein2e-1582.4
NC_007530:3414568:343271534327153433392678Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein2e-1582.4
NC_005945:3415135:343328134332813433958678Bacillus anthracis str. Sterne, complete genomehypothetical protein2e-1582.4
NC_008600:3488000:350953635095363510276741Bacillus thuringiensis str. Al Hakam, complete genomemurein hydrolase export regulator3e-1582
NC_014335:3408081:342995734299573430634678Bacillus cereus biovar anthracis str. CI chromosome, completeLrgB family protein1e-1480.5
NC_009725:200071:216341216341217033693Bacillus amyloliquefaciens FZB42, complete genomeYxaC1e-1377
NC_020410:198000:215575215575216267693Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized protein yxaC1e-1377
NC_017191:183500:200777200777201469693Bacillus amyloliquefaciens XH7 chromosome, complete genomemurein hydrolase export regulator2e-1375.9
NC_017190:182449:199677199677200369693Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein2e-1375.9
NC_017188:177500:194867194867195559693Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein2e-1375.9
NC_014551:199500:216887216887217579693Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein2e-1375.9
NC_013508:1262333:126531312653131266014702Edwardsiella tarda EIB202, complete genomepredicted inner membrane protein3e-1375.5
NC_020272:3706722:371320637132063713898693Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein4e-1375.1
NC_012917:1740542:174847417484741749169696Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeLrgB family protein3e-1272.4
NC_015865:1468689:149150014915001492174675Thermococcus sp. 4557 chromosome, complete genomeputative effector of murein hydrolase2e-1272.4
NC_008789:942309:965230965230965961732Halorhodospira halophila SL1, complete genomeLrgB family protein3e-1272
NC_010511:2079744:208162120816212082337717Methylobacterium sp. 4-46 chromosome, complete genomeLrgB family protein2e-1168.9
NC_010001:902506:914626914626915318693Clostridium phytofermentans ISDg, complete genomeLrgB family protein3e-1168.6
NC_010184:4879552:488813948881394888831693Bacillus weihenstephanensis KBAB4, complete genomeLrgB family protein9e-1167.4
NC_003909:4831000:483237248323724833064693Bacillus cereus ATCC 10987, complete genomehypothetical protein2e-1066.2
NC_007951:1971584:197413219741321974854723Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transmembrane protein, murein hydrolase LrgB like2e-1066.2
NC_008600:4868000:486924548692454869937693Bacillus thuringiensis str. Al Hakam, complete genomemurein hydrolase export regulator3e-1065.5
NC_014335:4800500:480690448069044807596693Bacillus cereus biovar anthracis str. CI chromosome, completeputative murein hydrolase export regulator3e-1065.5
NC_006274:4910465:491427049142704914962693Bacillus cereus E33L, complete genomeprobable murein hydrolase export regulator3e-1065.5
NC_012472:4867210:487102148710214871713693Bacillus cereus 03BB102, complete genomehypothetical protein3e-1065.5
NC_005957:4850659:486174648617464862438693Bacillus thuringiensis serovar konkukian str. 97-27, completeprobable murein hydrolase export regulator3e-1065.5
NC_011773:4914601:491839449183944919086693Bacillus cereus AH820 chromosome, complete genomehypothetical protein3e-1065.5
NC_016779:4825599:482939648293964830088693Bacillus cereus F837/76 chromosome, complete genomeLrgA-associated membrane protein LrgB3e-1065.5
NC_011772:4994500:500076350007635001455693Bacillus cereus G9842, complete genomehypothetical protein4e-1065.1
NC_011658:4866184:486997748699774870669693Bacillus cereus AH187 chromosome, complete genomehypothetical protein4e-1065.1
NC_011969:4802500:480375948037594804451693Bacillus cereus Q1 chromosome, complete genomemurein hydrolase export regulator4e-1065.1
NC_016771:4821000:482230048223004822992693Bacillus cereus NC7401, complete genomemurein hydrolase export regulator4e-1065.1
NC_017208:5096759:510057551005755101267693Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemurein hydrolase export regulator4e-1065.1
NC_017200:4915780:491957349195734920265693Bacillus thuringiensis serovar finitimus YBT-020 chromosome,murein hydrolase export regulator4e-1065.1
NC_004722:5027762:503529850352985035990693Bacillus cereus ATCC 14579, complete genomeMurein hydrolase export regulator4e-1065.1
NC_009674:3732000:373588337358833736575693Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeLrgB family protein9e-1063.9
NC_011725:5043198:504699750469975047584588Bacillus cereus B4264 chromosome, complete genomehypothetical protein1e-0963.5
NC_017243:2672909:269117526911752691885711Brachyspira intermedia PWS/A chromosome, complete genomeLrgB-like family protein3e-0962.4
NC_017192:276187:296115296115296828714Arcobacter sp. L, complete genomehypothetical protein3e-0962
NC_017082:6687020:668776766877676688489723Bradyrhizobium sp. S23321, complete genomehypothetical protein4e-0961.6
NC_008527:740060:754724754724755422699Lactococcus lactis subsp. cremoris SK11, complete genomePutative effector of murein hydrolase4e-0961.6
NC_009004:1770497:177665617766561777354699Lactococcus lactis subsp. cremoris MG1363, complete genomeLrgB family protein4e-0961.6
NC_019435:747162:761828761828762526699Lactococcus lactis subsp. cremoris UC509.9, complete genomeMurein hydrolase export regulator4e-0961.6
NC_003366:2266757:226805722680572268767711Clostridium perfringens str. 13, complete genomehypothetical protein9e-0960.5
NC_008261:2481500:248190124819012482611711Clostridium perfringens ATCC 13124, complete genomelrgB-like family protein1e-0860.5
NC_009053:895965:895965895965896651687Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein1e-0860.1
NC_008262:2150944:215131421513142152024711Clostridium perfringens SM101, complete genomelrgB-like family protein1e-0860.1
NC_014150:2201251:222398322239832224693711Brachyspira murdochii DSM 12563 chromosome, complete genomeLrgB family protein3e-0858.9
NC_012225:2611680:262010626201062620816711Brachyspira hyodysenteriae WA1, complete genomeLrgB-like family protein4e-0858.5
NC_015410:3701000:372068537206853721368684Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-0757
NC_010939:896500:896880896880897566687Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein2e-0756.2
NC_013446:4045000:406171940617194062459741Comamonas testosteroni CNB-2, complete genomeLrgB-like protein3e-0755.8
NC_008740:443274:511424511424512146723Marinobacter aquaeolei VT8, complete genomeLrgB family protein7e-0754.3
NC_004668:3053119:306676730667673067450684Enterococcus faecalis V583, complete genomeantiholin-like protein LrgB1e-0653.5
NC_017316:2581781:259646325964632597146684Enterococcus faecalis OG1RF chromosome, complete genomemurein hydrolase regulator LrgB1e-0653.1
NC_017513:2017000:203102320310232031715693Neisseria meningitidis G2136 chromosome, complete genomeLrgB family protein4e-0651.6
NC_008767:2010140:202416520241652024857693Neisseria meningitidis FAM18, complete genomehypothetical inner membrane protein4e-0651.6
NC_010120:199942:202698202698203390693Neisseria meningitidis 053442, complete genomehypothetical inner membrane protein6e-0651.2