Pre_GI: BLASTP Hits

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Query: NC_004547:1970686:1973615 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1973615, End: 1974025, Length: 411

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:2921932:294232229423222942732411Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar protein FliS4e-71266
NC_008800:2695977:272166927216692722067399Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar protein FliS2e-57220
NC_012912:1788308:179429917942991794709411Dickeya zeae Ech1591, complete genomeflagellar protein FliS5e-52202
NC_013592:1730505:173527017352701735686417Dickeya dadantii Ech586, complete genomeflagellar protein FliS4e-51199
NC_014500:3023762:305026930502693050679411Dickeya dadantii 3937 chromosome, complete genomeflagellar biosynthesis protein fliS7e-51198
NC_016816:1912366:192923819292381929648411Pantoea ananatis LMG 5342, complete genomeflagellar biosynthesis protein FliS8e-51198
NC_016514:2950860:297299529729952973399405Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar protein fliS3e-50196
NC_015224:2017781:203170020317002032041342Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar protein FliS8e-49191
NC_009778:1222273:124699412469941247404411Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-47185
NC_020260:1293860:132360613236061324016411Cronobacter sakazakii Sp291, complete genomeflagellar protein FliS7e-47185
NC_011740:1189455:120898712089871209397411Escherichia fergusonii ATCC 35469, complete genomeflagellar protein potentiates polymerization8e-47185
NC_015968:2845751:285157928515792851989411Enterobacter asburiae LF7a chromosome, complete genomeflagellar protein FliS9e-45178
NC_014121:1357339:137321813732181373628411Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelagellar protein FliS5e-44176
NC_014837:2586870:259366225936622594069408Pantoea sp. At-9b chromosome, complete genomeflagellar protein FliS1e-40164
NC_014562:1844268:184569818456981846105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar protein fliS3e-39160
NC_012880:1765920:182034418203441820751408Dickeya dadantii Ech703, complete genomeflagellar protein FliS4e-39159
NC_015731:990000:100017010001701000598429Nitrosomonas sp. Is79A3 chromosome, complete genomeflagellar protein FliS9e-29125
NC_009138:1843998:188962818896281890113486Herminiimonas arsenicoxydans, complete genomeflagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) (partial match)9e-25112
NC_010002:661696:685521685521685934414Delftia acidovorans SPH-1, complete genomeflagellar protein FliS2e-24111
NC_015563:606783:624564624564624977414Delftia sp. Cs1-4 chromosome, complete genomeflagellar protein FliS2e-23107
NC_009092:1504363:156976115697611570171411Shewanella loihica PV-4, complete genomeflagellar protein FliS4e-22103
NC_008740:2905990:290843929084392908843405Marinobacter aquaeolei VT8, complete genomeflagellar protein FliS1e-21101
NC_008340:774206:786827786827787264438Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar protein FliS5e-2199.8
NC_007508:2277640:230054923005492300962414Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellin-specific chaperone FliS8e-2199
NC_014910:4026613:402661340266134027053441Alicycliphilus denitrificans BC chromosome, complete genomeflagellar protein flis1e-2098.2
NC_009434:2006500:201584820158482016234387Pseudomonas stutzeri A1501, complete genomeflagellar protein FliS1e-1995.1
NC_016616:1861852:187072918707291871172444Dechlorosoma suillum PS chromosome, complete genomeflagellar biosynthetic protein FliS1e-1994.7
NC_015740:1845370:185346618534661853852387Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellar protein FliS2e-1994.4
NC_015138:4905935:490862349086234909069447Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar protein FliS4e-1993.2
NC_015733:4253961:426173842617384262133396Pseudomonas putida S16 chromosome, complete genomeflagellar protein FliS9e-1889
NC_009439:3104000:310939831093983109790393Pseudomonas mendocina ymp, complete genomeflagellar protein FliS9e-1889
NC_013851:2211120:223816322381632238564402Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar protein FliS8e-1889
NC_016112:806256:827372827372827794423Methylomicrobium alcaliphilum chromosome, complete genomeB-type flagellar protein fliS1e-1788.2
NC_009439:3104000:310894531089453109325381Pseudomonas mendocina ymp, complete genomeflagellar protein FliS6e-1682.8
NC_016745:2913712:292711429271142927500387Oceanimonas sp. GK1 chromosome, complete genomeflagellar protein FliS1e-1582
NC_005085:4157257:417726841772684177705438Chromobacterium violaceum ATCC 12472, complete genomeprobable flagellar protein FliS1e-1581.6
NC_015276:3669263:368070836807083681130423Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar protein FliS1e-1581.6
NC_015660:391627:412871412871413269399Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar protein FliS2e-1374.3
NC_014650:376070:401490401490401888399Geobacillus sp. Y4.1MC1 chromosome, complete genomeflagellar protein FliS2e-1374.3
NC_014378:261064:272439272439272894456Acetohalobium arabaticum DSM 5501 chromosome, complete genomeHpt protein3e-1373.9
NC_007759:1356439:137996713799671380491525Syntrophus aciditrophicus SB, complete genomeflagellin-specific chaperone3e-1373.9
NC_009348:381752:389001389001389393393Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafC8e-1372.4
NC_015391:2059191:209097420909742091342369Carnobacterium sp. 17-4 chromosome, complete genomeflagellar protein FliS1e-1272
NC_010424:1857062:187680518768051877209405Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar protein FliS1e-1272
NC_006510:3133965:313471731347173135118402Geobacillus kaustophilus HTA426, complete genomeflagellar protein FliS2e-1271.2
NC_008570:1852286:186332818633281863750423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeflagellar protein FliS2e-1271.2
NC_009348:2836969:284363828436382844060423Aeromonas salmonicida subsp. salmonicida A449, complete genomeflagellar protein FliS6e-1269.3
NC_011899:1807365:182155618215561821978423Halothermothrix orenii H 168, complete genomeflagellar protein FliS8e-1269.3
NC_004557:1826977:183234218323421832728387Clostridium tetani E88, complete genomeflagellar protein fliS9e-1268.9
NC_013791:1082951:108622010862201086618399Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar protein FliS1e-1168.6
NC_020210:3169258:316925831692583169659402Geobacillus sp. GHH01, complete genomechaperone for the export of flagellin2e-1167.8
NC_014377:1546124:155822115582211558607387Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar protein FliS5e-1166.6
NC_009495:2876865:288737328873732887771399Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar protein FliS6e-1166.2
NC_012658:2930244:293897829389782939358381Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar protein FliS9e-1165.5
NC_012563:3090954:310146231014623101851390Clostridium botulinum A2 str. Kyoto, complete genomeflagellar protein FliS9e-1165.5
NC_009697:2790277:280078528007852801174390Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar protein FliS9e-1165.5
NC_009698:2727203:273771127377112738100390Clostridium botulinum A str. Hall chromosome, complete genomeflagellar protein FliS9e-1165.5
NC_010520:2937981:294681229468122947201390Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar protein FliS1e-1065.1
NC_017195:3426000:343140734314073431808402Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar protein FliS1e-1065.1
NC_017297:2905138:291113229111322911521390Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar protein FliS2e-1064.7
NC_009699:2901497:291099429109942911383390Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar protein FliS2e-1064.7
NC_019978:2260395:226732122673212267740420Halobacteroides halobius DSM 5150, complete genomeflagellar biosynthetic protein FliS2e-1064.3
NC_007644:779376:804107804107804523417Moorella thermoacetica ATCC 39073, complete genomeflagellar protein FliS2e-1064.3
NC_015424:1603000:161534816153481615770423Aeromonas veronii B565 chromosome, complete genomeflagellar protein FliS2e-1064.3
NC_004193:2553630:255922025592202559621402Oceanobacillus iheyensis HTE831, complete genomeflagellar protein FliS2e-1064.3
NC_015850:1497998:151710915171091517486378Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar biosynthesis protein fliS3e-1063.9
NC_019896:577594:592108592108592509402Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar protein FliS3e-1063.5
NC_015519:924000:930158930158930538381Tepidanaerobacter sp. Re1 chromosome, complete genomeflagellar protein FliS6e-1062.8
NC_014328:1046958:106571010657101066096387Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar protein FliS9e-1062.4
NC_007517:480303:489861489861490283423Geobacter metallireducens GS-15, complete genomeFlagellar protein FliS9e-1062.4
NC_020304:3447847:344875534487553449222468Desulfocapsa sulfexigens DSM 10523, complete genomeflagellar biosynthetic protein FliS1e-0962
NC_020134:2772500:277250227725022772906405Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar protein FliS3e-0960.5
NC_007503:861668:874400874400874777378Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar protein FliS3e-0960.5
NC_017295:2286911:229960822996082299988381Clostridium acetobutylicum EA 2018 chromosome, complete genomeFlagellar protein FliS6e-0959.7
NC_015565:1920329:192474419247441925136393Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeflagellar protein FliS9e-0958.9
NC_012491:5628000:563421656342165634593378Brevibacillus brevis NBRC 100599, complete genomeflagellar protein FliS9e-0958.9
NC_009454:2201987:220248022024802202869390Pelotomaculum thermopropionicum SI, complete genomeflagellin-specific chaperone FliS8e-0958.9
NC_013406:6568273:658141665814166581817402Paenibacillus sp. Y412MC10 chromosome, complete genomeflagellar protein FliS1e-0858.5
NC_018870:2232857:225144222514422251834393Thermacetogenium phaeum DSM 12270 chromosome, complete genomeflagellar protein FliS1e-0858.5
NC_009922:2672396:269459926945992694979381Alkaliphilus oremlandii OhILAs, complete genomeflagellar protein FliS1e-0858.5
NC_014614:2434017:245605224560522456432381Clostridium sticklandii, complete genomeFliS1e-0858.5
NC_006177:3192500:319856331985633198946384Symbiobacterium thermophilum IAM 14863, complete genomeflagellar protein2e-0857.8
NC_015425:1207314:121878112187811219182402Clostridium botulinum BKT015925 chromosome, complete genomeflagellar protein FliS2e-0857.8
NC_009253:2615777:263394426339442634333390Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar protein FliS7e-0855.8
NC_012793:3035978:305122630512263051654429Geobacillus sp. WCH70, complete genomeflagellar protein FliS3e-0753.9
NC_006510:3133965:316241831624183162843426Geobacillus kaustophilus HTA426, complete genomeflagellar biosynthesis3e-0753.9
NC_010718:2337209:236678623667862367208423Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar protein FliS3e-0753.5
NC_013093:2599591:260761626076162608014399Actinosynnema mirum DSM 43827, complete genomeflagellar protein FliS6e-0753.1
NC_021182:2921000:293100429310042931390387Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FliS5e-0753.1
NC_012781:3087467:309249130924913092886396Eubacterium rectale ATCC 33656, complete genomeflagellar protein8e-0752.4
NC_019897:128610:181778181778182164387Thermobacillus composti KWC4 chromosome, complete genomeflagellar biosynthetic protein FliS1e-0652
NC_013223:724394:761168761168761626459Desulfohalobium retbaense DSM 5692, complete genomeflagellar protein FliS2e-0651.6
NC_007575:192095:208925208925209323399Sulfurimonas denitrificans DSM 1251, complete genomeflagellar protein FliS2e-0651.2
NC_014387:605711:623391623391623828438Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflagellar protein FliS12e-0651.2
NC_012914:6583000:658957865895786590003426Paenibacillus sp. JDR-2, complete genomeflagellar protein FliS2e-0650.8
NC_020291:4944835:498705849870584987438381Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar assembly protein FliS2e-0650.8
NC_011567:2556915:256420025642002564640441Anoxybacillus flavithermus WK1, complete genomeFlagellin-specific chaperone FliS4e-0650.4
NC_010723:801215:808112808112808489378Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar protein FliS5e-0650.1
NC_015913:624859:631758631758632138381Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar protein FliS7e-0649.3