Pre_GI Gene

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Host: NC_014614 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014614:2434017 Clostridium sticklandii, complete genome

Host Lineage: Clostridium sticklandii; Clostridium; unclassified Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: This Clostridium (HF strain, ATCC 12662) was initially found associated with Methanococcus vannieli in formate-enriched cultures. After its isolation in pure culture, it was shown that this organism is capable of fermenting amino acids. Biochemical studies have shown that C. sticklandii obtains energy for growth from oxidation-reduction reactions between specific amino acid pairs. Clostridium sticklandii is a Gram-positive bacterium with low (G +C) content that is capable of fermenting amino acids.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
243401724365602544hypothetical proteinBLASTP
24367592437226468hypothetical proteinBLASTP
24373262438189864hypothetical proteinBLASTP
24382262439212987PrfBQuickGO ontologyBLASTP
243933424420272694preprotein translocase subunit ATPaseQuickGO ontologyBLASTP
24422702442806537ribosomal subunit interface proteinQuickGO ontologyBLASTP
24429072443518612V-type sodium ATP synthase subunit DQuickGO ontologyBLASTP
244352424448971374V-type ATP synthase beta chain V-type ATPase subunit BQuickGO ontologyBLASTP
244489824466821785V-type ATP synthase alpha chain V-type ATPase subunit AQuickGO ontologyBLASTP
24466792447308630hypothetical protein
24473192447630312Vacuolar H-transporting two-sector ATPase F subunitQuickGO ontology
24476432448065423putative ATPase related proteinQuickGO ontology
244806224500411980putative V-type sodium ATP synthase subunit IQuickGO ontologyBLASTP
245008424511241041putative V-type sodium ATP synthase subunit CQuickGO ontologyBLASTP
24511272451447321hypothetical protein
24520192452135117hypothetical protein
24522002452400201hypothetical protein
245242124535961176putative GAF sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
24537112454022312hypothetical proteinBLASTP
24540192454687669putative transcriptional regulator YhcZQuickGO ontologyBLASTP
24549092455106198hypothetical proteinBLASTP
24551622455518357hypothetical proteinBLASTP
24555392456048510hypothetical protein
24560522456432381FliSQuickGO ontologyBLASTP
245646024580671608flagellar hook-associated capping protein 2 HAP2QuickGO ontologyBLASTP