Pre_GI: BLASTP Hits

Some Help

Query: NC_004347:791897:810487 Shewanella oneidensis MR-1, complete genome

Start: 810487, End: 812649, Length: 2163

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016510:2175000:2190171219017121924292259Flavobacterium columnare ATCC 49512 chromosome, complete genometonb-dependent receptor plug8e-26119
NC_006347:2109192:2132413213241321347042292Bacteroides fragilis YCH46, complete genomeTonB-dependent outer membrane receptor6e-21103
NC_003228:2170963:2190098219009821923892292Bacteroides fragilis NCTC 9343, complete genomeputative TonB-dependent outer membrane protein6e-21103
NC_015144:124500:1427581427581449292172Weeksella virosa DSM 16922 chromosome, complete genomeTonB-dependent receptor plug5e-1790.1
NC_014838:589581:5965455965455987372193Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceTonB-dependent siderophore receptor2e-1585.1
NC_013520:120214:1202141202141221571944Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor plug2e-1481.6
NC_014655:570000:5891865891865913572172Leadbetterella byssophila DSM 17132 chromosome, complete genometonb-dependent receptor plug4e-1480.9
NC_008345:3394154:3396884339688433989592076Shewanella frigidimarina NCIMB 400, complete genomeTonB-dependent receptor, plug2e-1377.8
NC_015177:1822000:1822932182293218251032172Pedobacter saltans DSM 12145 chromosome, complete genomeTonB-dependent receptor plug2e-1274.7
NC_015177:124000:1401821401821423562175Pedobacter saltans DSM 12145 chromosome, complete genomeTonB-dependent receptor plug3e-1274.3
NC_016776:2516149:2521990252199025241972208Bacteroides fragilis 638R, complete genomeputative TonB-dependent outer membrane receptor protein5e-1273.6
NC_006347:2375480:2381312238131223835282217Bacteroides fragilis YCH46, complete genomeputative TonB-dependent outer membrane receptor protein6e-1273.2
NC_021066:3769405:3782205378220537844662262Raoultella ornithinolytica B6, complete genomeouter membrane receptor FepA9e-1272.8
NC_003228:2437288:2437288243728824394952208Bacteroides fragilis NCTC 9343, complete genomeputative TonB-dependent outer membrane receptor protein1e-1172.4
NC_015276:855150:8702618702618721921932Marinomonas mediterranea MMB-1 chromosome, complete genomeTonB-dependent receptor4e-1170.5
NC_010475:649177:6663436663436683131971Synechococcus sp. PCC 7002, complete genomeiron compound TonB-dependent receptor, putative4e-1170.5
NC_018080:3448392:3473901347390134758621962Pseudomonas aeruginosa DK2 chromosome, complete genomeTonB-dependent receptor6e-1170.1
NC_005125:2107088:2119165211916521214082244Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-1069.3
NC_008321:2922000:2931349293134929340722724Shewanella sp. MR-4, complete genomeTonB-dependent receptor2e-1068.6
NC_014655:1835848:1851867185186718537651899Leadbetterella byssophila DSM 17132 chromosome, complete genometonb-dependent receptor2e-1068.6
NC_018678:87064:1025031025031045962094Alteromonas macleodii str. 'English Channel 673' chromosome,FhuE receptor3e-1067.8
NC_006138:3355028:3370153337015333721592007Desulfotalea psychrophila LSv54, complete genomesimilar to TonB dependent outer membrane receptor4e-1067
NC_013520:120214:1223011223011242831983Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor plug9e-1066.2
NC_015638:923660:9253609253609279002541Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeTonB-dependent receptor plug1e-0965.5
NC_008686:1592073:1608270160827016103122043Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTonB-dependent receptor, plug2e-0965.5
NC_010468:4455201:4466591446659144684351845Escherichia coli ATCC 8739, complete genomeTonB-dependent vitamin B12 receptor2e-0965.1
NC_010473:4256000:4261359426135942632031845Escherichia coli str. K-12 substr. DH10B, complete genomevitamin B12/cobalamin outer membrane transporter2e-0965.1
NC_000913:4159090:4161662416166241635061845Escherichia coli K12, complete genomevitamin B12/cobalamin outer membrane transporter2e-0965.1
CU928160:4248621:4252870425287042547141845Escherichia coli IAI1 chromosome, complete genomevitamin B12/cobalamin outer membrane transporter2e-0965.1
NC_015563:4093650:4094717409471740972032487Delftia sp. Cs1-4 chromosome, complete genomeTonB-dependent siderophore receptor4e-0963.9
NC_015222:1492500:1506214150621415080671854Nitrosomonas sp. AL212 chromosome, complete genomeTonB-dependent vitamin B12 receptor5e-0963.5
NC_015703:6295500:6297197629719762995422346Runella slithyformis DSM 19594 chromosome, complete genomeTonB-dependent receptor5e-0963.5
NC_009648:4656187:4660313466031346621691857Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomevitamin B12/cobalamin outer membrane transporter1e-0862.4
NC_013162:769915:7736757736757758162142Capnocytophaga ochracea DSM 7271, complete genomeTonB-dependent receptor plug1e-0862.4
NC_015164:1503352:1523033152303315257502718Bacteroides salanitronis DSM 18170 chromosome, complete genomeTonB-dependent receptor2e-0862
NC_008782:1136732:1149951114995111518311881Acidovorax sp. JS42, complete genomeTonB-dependent receptor1e-0862
NC_011992:1038985:1052210105221010540901881Acidovorax ebreus TPSY, complete genomeTonB-dependent receptor1e-0862
NC_005810:3493607:3497913349791334998741962Yersinia pestis biovar Microtus str. 91001, complete genomevitamin B12/cobalamin outer membrane transporter2e-0861.6
NC_007508:4067862:4092016409201640948592844Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeTonB-dependent outer membrane receptor2e-0861.6
NC_007951:1042291:1059087105908710609581872Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative outer membrane cobalamin receptor, TonB dependent4e-0860.8
NC_017192:2153461:2164451216445121663761926Arcobacter sp. L, complete genomeTonB-dependent receptor5e-0860.5
NC_016776:2473318:2473318247331824761072790Bacteroides fragilis 638R, complete genomeputative TonB-dependent outer membrane receptor protein5e-0860.5
NC_006347:2327018:2332117233211723349062790Bacteroides fragilis YCH46, complete genomeputative TonB-dependent outer membrane protein5e-0860.5
NC_014258:355845:3605163605163626902175Pantoea vagans C9-1 plasmid pPag3, complete sequenceTonB-dependent outer membrane siderophore receptor5e-0860.5
NC_017192:1933106:1935603193560319379752373Arcobacter sp. L, complete genomeTonB-dependent receptor protein5e-0860.1
NC_006371:1997954:2001039200103920029881950Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical receptor5e-0860.1
NC_011026:1181940:1197951119795112000862136Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug7e-0859.7
NC_012731:3411161:3433588343358834357622175Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeouter membrane receptor FepA7e-0859.7
NC_014541:1280835:1302799130279913054202622Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor8e-0859.7
NC_015422:1163752:1184048118404811858411794Alicycliphilus denitrificans K601 chromosome, complete genomeTonB-dependent receptor plug8e-0859.7
NC_003198:3586000:3601247360124736030911845Salmonella enterica subsp. enterica serovar Typhi str. CT18,vitamin B12 receptor protein1e-0758.9
NC_006511:4119332:4121860412186041237041845Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCvitamin B12 receptor protein2e-0758.5
NC_008253:296500:3201213201213222982178Escherichia coli 536, complete genomeTonB dependent outer membrane siderophore receptor2e-0758.5
NC_009052:1899954:1910001191000119128172817Shewanella baltica OS155, complete genomeTonB-dependent receptor2e-0758.5
NC_011747:86000:99851998511020132163Escherichia coli S88 plasmid pECOS88, complete sequenceouter membrane receptor FepA2e-0758.2
NC_014910:3458475:3458475345847534602681794Alicycliphilus denitrificans BC chromosome, complete genometonb-dependent receptor plug3e-0757.8
NC_006625:1:1366613666158402175Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceouter membrane receptor FepA3e-0757.4
NC_011663:2517793:2518918251891825209992082Shewanella baltica OS223 chromosome, complete genomeTonB-dependent siderophore receptor5e-0757
NC_011274:2793355:2799369279936928015492181Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane receptor FepA5e-0757
NC_009431:40917:4250742507446092103Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein4e-0757
NC_009337:320389:3288763288763313472472Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeTonB-dependent receptor, plug4e-0757
NC_015963:4500:2389923899259922094Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceTonB-dependent receptor6e-0756.6
NC_007912:909112:9325969325969345181923Saccharophagus degradans 2-40, complete genomeOuter membrane cobalamin receptor protein-like6e-0756.6
NC_015563:3266004:3294096329409632964112316Delftia sp. Cs1-4 chromosome, complete genomeTonB-dependent siderophore receptor6e-0756.6
NC_014800:329861:3473643473643493491986Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeenterobactin receptor protein7e-0756.6
NC_014323:3195178:3215818321581832182082391Herbaspirillum seropedicae SmR1 chromosome, complete genomeTonB-dependent ferric siderophore receptor protein7e-0756.6
NC_007946:2155454:2173489217348921756362148Escherichia coli UTI89, complete genomeputative outer membrane receptor for iron compound or colicin9e-0756.2
CP002797:2062006:2068426206842620705732148Escherichia coli NA114, complete genomehypothetical protein9e-0756.2
NC_004431:2304280:2322324232232423244712148Escherichia coli CFT073, complete genomePutative outer membrane receptor for iron compound or colicin9e-0756.2
NC_008253:2056734:2074801207480120769482148Escherichia coli 536, complete genomeputative outer membrane receptor for iron compound or colicin9e-0756.2
NC_011750:1094000:1111646111164611138202175Escherichia coli IAI39 chromosome, complete genomeputative outer membrane receptor for iron compound or colicin9e-0756.2
NC_015682:379373:3793733793733812321860Thermodesulfobacterium sp. OPB45 chromosome, complete genomeTonB-dependent receptor1e-0655.8
NC_009456:557962:5745905745905766862097Vibrio cholerae O395 chromosome 1, complete sequenceheme transport protein HutA1e-0655.8
NC_012583:683887:6872566872566893522097Vibrio cholerae O395 chromosome chromosome II, complete sequenceheme transport protein HutA1e-0655.8
NC_012667:839318:8430658430658451612097Vibrio cholerae MJ-1236 chromosome 2, complete genomeTonB-dependent heme and hemoglobin receptor HutA1e-0655.8
NC_017187:691769:7017767017767040402265Arcobacter butzleri ED-1, complete genomeiron-regulated outer membrane virulence protein1e-0655.8
NC_008228:372520:3895023895023919492448Pseudoalteromonas atlantica T6c, complete genomeTonB-dependent receptor1e-0655.8
NC_016510:871000:8710018710018729501950Flavobacterium columnare ATCC 49512 chromosome, complete genomeTonB-dependent outer membrane receptorprecursor1e-0655.8
NC_010067:171053:1829001829001850862187Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0655.8
NC_017046:2943929:2944906294490629470862181Salmonella enterica subsp. enterica serovar Typhimurium str. 798TonB-dependent outer membrane siderophore receptor protein1e-0655.5
NC_016857:2943912:2946165294616529483452181Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74outer membrane receptor FepA1e-0655.5
NC_016856:2896630:2943824294382429460042181Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Souter membrane receptor FepA1e-0655.5
NC_016810:2943912:2946165294616529483452181Salmonella enterica subsp. enterica serovar Typhimurium strTonB-dependent outer membrane siderophore receptor protein1e-0655.5
NC_006905:2857699:2878274287827428804542181Salmonella enterica subsp. enterica serovar Choleraesuis strTonB-dependent siderophore receptor protein1e-0655.5
NC_011294:2802502:2808515280851528106952181Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane receptor FepA2e-0655.5
NC_010102:2881714:2887730288773028899042175Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0655.5
NC_011094:2791719:2830711283071128328852175Salmonella enterica subsp. enterica serovar Schwarzengrund strouter membrane receptor FepA1e-0655.5
NC_011205:2962270:2968283296828329704572175Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853outer membrane receptor FepA1e-0655.5
NC_011083:2847318:2898099289809929002732175Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,TonB dependent outer membrane siderophore receptor protein1e-0655.5
NC_015160:1467445:1467445146744514695082064Odoribacter splanchnicus DSM 20712 chromosome, complete genomeTonB-dependent receptor plug1e-0655.5
NC_006347:2861498:2882669288266928847952127Bacteroides fragilis YCH46, complete genomeputative TonB-dependent outer membrane protein1e-0655.5
NC_011149:2829811:2832064283206428342382175Salmonella enterica subsp. enterica serovar Agona str. SL483,TonB dependent outer membrane siderophore receptor protein1e-0655.5
NC_011080:2897977:2900230290023029024042175Salmonella enterica subsp. enterica serovar Newport str. SL254,TonB dependent outer membrane siderophore receptor protein1e-0655.5
NC_016831:2779864:2785878278587827880522175Salmonella enterica subsp. enterica serovar Gallinarum/pullorumTonB-dependent outer membrane siderophore receptor protein1e-0655.5
NC_004663:1409462:1423594142359414246521059Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein2e-0655.1
NC_013520:1936209:1950535195053519525982064Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor2e-0655.1
NC_004431:3409389:3448776344877634508662091Escherichia coli CFT073, complete genomePutative receptor2e-0655.1
NC_011751:3453683:3470427347042734725172091Escherichia coli UMN026 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein2e-0655.1
NC_014640:5047201:5063800506380050661932394Achromobacter xylosoxidans A8 chromosome, complete genomeTonB-dependent siderophore receptor family protein 152e-0655.1
CP002797:4603787:4627269462726946293592091Escherichia coli NA114, complete genomePutative colicin I receptor precursor2e-0655.1
NC_007613:4403070:4403070440307044051602091Shigella boydii Sb227, complete genomeputative receptor2e-0655.1
NC_002695:1417912:1418370141837014204602091Escherichia coli O157:H7 str. Sakai, complete genomeIha2e-0655.1
NC_002655:1103991:1106535110653511086252091Escherichia coli O157:H7 EDL933, complete genomeputative receptor2e-0655.1
NC_013008:1354988:1362242136224213643322091Escherichia coli O157:H7 str. TW14359 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein2e-0655.1
NC_013361:1335166:1338801133880113408912091Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein2e-0655.1
NC_013364:1306756:1310392131039213124822091Escherichia coli O111:H- str. 11128, complete genomeputative adhesin2e-0655.1
NC_016832:2743801:2749820274982027519942175Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Ferric enterobactin receptor3e-0654.7
NC_014012:3356629:3361888336188833648092922Shewanella violacea DSS12, complete genomeTonB-dependent receptor2e-0654.7
NC_019940:3480690:3503934350393435059251992Thioflavicoccus mobilis 8321 chromosome, complete genomeouter membrane receptor for ferrienterochelin and colicins2e-0654.7
NC_021150:1322000:1355109135510913571572049Azotobacter vinelandii CA6, complete genomeTonB-dependent receptor2e-0654.7
NC_012560:1322000:1355097135509713571452049Azotobacter vinelandii DJ, complete genomeTonB-dependent receptor2e-0654.7
NC_015311:1860666:1868997186899718714112415Prevotella denticola F0289 chromosome, complete genomeTonB-dependent receptor plug domain-containing protein4e-0654.3
NC_013520:120214:1347501347501366181869Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor4e-0654.3
NC_009052:1899954:1906515190651519093042790Shewanella baltica OS155, complete genomeTonB-dependent receptor, plug3e-0654.3
NC_003198:2769449:2776664277666427788442181Salmonella enterica subsp. enterica serovar Typhi str. CT18,TonB-dependent outer membrane siderophore receptor protein3e-0654.3
NC_004631:2755306:2762521276252127647012181Salmonella enterica subsp. enterica serovar Typhi Ty2, completeTonB-dependent outer membrane siderophore receptor protein3e-0654.3
NC_009439:918534:9185349185349207652232Pseudomonas mendocina ymp, complete genomeTonB-dependent receptor3e-0654.3
NC_016776:215500:2312342312342335762343Bacteroides fragilis 638R, complete genomeputative TonB-dependent outer membrane protein5e-0653.9
NC_016776:3181706:3186704318670431888482145Bacteroides fragilis 638R, complete genomeputative exported TonB-dependent receptor protein4e-0653.9
NC_003197:2894344:2923589292358929257692181Salmonella typhimurium LT2, complete genomeTonB-dependent siderophore receptor protein4e-0653.9
NC_016860:2917910:2947155294715529493292175Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane receptor FepA4e-0653.9
NC_003228:3143470:3149210314921031513542145Bacteroides fragilis NCTC 9343, complete genomeputative exported TonB-dependent receptor protein4e-0653.9
NC_006347:3082921:3087919308791930900632145Bacteroides fragilis YCH46, complete genomeTonB-dependent receptor4e-0653.9
NC_015410:1324313:1327313132731313297332421Pseudomonas mendocina NK-01 chromosome, complete genomeTonB-dependent siderophore receptor protein4e-0653.9
NC_016863:2844883:2892077289207728942572181Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1outer membrane receptor FepA4e-0653.9
NC_009937:5033152:5036513503651350390112499Azorhizobium caulinodans ORS 571, complete genomeputative TonB-dependent receptor5e-0653.5
NC_011060:2637893:2647299264729926498092511Pelodictyon phaeoclathratiforme BU-1, complete genomeTonB-dependent receptor5e-0653.5
NC_008358:2638245:2638245263824526404372193Hyphomonas neptunium ATCC 15444, complete genomeTonB-dependent receptor5e-0653.5
NC_012125:2826624:2858806285880628609862181Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane receptor FepA8e-0653.1
NC_017187:1305805:1312730131273013150872358Arcobacter butzleri ED-1, complete genomeTonB-dependent receptor protein8e-0653.1
NC_002488:1430680:1444050144405014461012052Xylella fastidiosa 9a5c, complete genomeTonB-dependent receptor for iron transport9e-0652.8
NC_014802:716699:7337307337307358322103Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeferric receptor CfrA9e-0652.8
NC_011663:2517793:2523072252307225252402169Shewanella baltica OS223 chromosome, complete genomeTonB-dependent siderophore receptor1e-0552.8