Pre_GI Gene

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Host: NC_014012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014012:3356629 Shewanella violacea DSS12, complete genome

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
33566293357249621TonB2 proteinQuickGO ontologyBLASTP
33572513357661411TonB system transport protein ExbD2QuickGO ontologyBLASTP
33576693358196528TonB system transport protein ExbB2QuickGO ontologyBLASTP
335819633595511356MotATolQExbB proton channel family proteinQuickGO ontologyBLASTP
33595513360333783hypothetical proteinBLASTP
33609643361128165hypothetical protein
33613713361523153hypothetical proteinBLASTP
33615693361862294hypothetical proteinBLASTP
336188833648092922TonB-dependent receptorQuickGO ontologyBLASTP
336541733666221206outer membrane porin putativeQuickGO ontologyBLASTP
336685133692862436DNA polymerase IIQuickGO ontologyBLASTP
336938533714902106ATP-dependent helicase DinGQuickGO ontologyBLASTP
33715003372273774hypothetical proteinBLASTP
33722793372953675primosomal replication protein n putativeQuickGO ontologyBLASTP
33729633373661699hypothetical proteinBLASTP
33739663374235270hypothetical proteinBLASTP