Pre_GI Gene

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Host: NC_010475 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010475:649177 Synechococcus sp. PCC 7002, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6491776504961320tRNA modifying enzyme MiaB-like proteinQuickGO ontologyBLASTP
650633651265633ATP phosphoribosyltransferaseQuickGO ontologyBLASTP
6513136525271215ATP phosphoribosyltransferase regulatory subunitQuickGO ontologyBLASTP
652562653491930DnaJ-like proteinQuickGO ontology
653563654405843Inositol-1-monophosphatase family proteinQuickGO ontologyBLASTP
654498654866369ferredoxin 2Fe-2S IIQuickGO ontologyBLASTP
65493865502487tRNA-SerQuickGO ontology
6550996570181920ABC transporter ATP binding proteinQuickGO ontologyBLASTP
657068657508441Protein of unknown function PF01724QuickGO ontologyBLASTP
6575666593801815threonyl-tRNA synthetaseQuickGO ontologyBLASTP
659721659987267hypothetical protein
660524661006483Holliday juction resolvaseQuickGO ontologyBLASTP
661185661559375hypothetical proteinBLASTP
661543661785243Protein of unknown function DUF433QuickGO ontology
662124663074951hypothetical protein
6632616643131053Fe3 ABC transporter permease proteinQuickGO ontologyBLASTP
6643106655241215Fe3 ABC transporter periplasmic iron-binding proteinQuickGO ontologyBLASTP
665536666303768Putative 35-cyclic-nucleotide phosphodiesteraseQuickGO ontologyBLASTP
6663436683131971iron compound TonB-dependent receptor putativeQuickGO ontologyBLASTP
6688936700471155hypothetical proteinBLASTP
671017671745729phycocyanin-associated phycobilisome rod-core linker polypeptideQuickGO ontologyBLASTP
671840672355516WD40-like Beta Propeller RepeatQuickGO ontology
672352672627276transcriptional regulator protein LuxR familyQuickGO ontologyBLASTP