Pre_GI: BLASTP Hits

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Query: NC_017986:1862408:1873376 Pseudomonas putida ND6 chromosome, complete genome

Start: 1873376, End: 1873591, Length: 216

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA2e-0857.8
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA3e-0857
NC_010338:359940:379731379731379931201Caulobacter sp. K31, complete genomephage transcriptional regulator, AlpA3e-0857
NC_007925:1085500:108685210868521087058207Rhodopseudomonas palustris BisB18, complete genomephage transcriptional regulator, AlpA4e-0857
NC_015379:908904:935089935089935310222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, AlpA family4e-0857
NC_015675:4565500:457963945796394579836198Mesorhizobium opportunistum WSM2075 chromosome, complete genomephage transcriptional regulator AlpA6e-0856.2
NC_009720:464078:485378485378485578201Xanthobacter autotrophicus Py2, complete genomephage transcriptional regulator, AlpA7e-0856.2
NC_015554:4648919:466519546651954665377183Alteromonas sp. SN2 chromosome, complete genomephage transcriptional regulator, AlpA9e-0855.8
NC_014217:2760898:276247027624702762673204Starkeya novella DSM 506 chromosome, complete genomephage transcriptional regulator, AlpA8e-0855.8
NC_020304:752012:772470772470772679210Desulfocapsa sulfexigens DSM 10523, complete genomeputative transcriptional regulator9e-0855.5
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA1e-0755.5
NC_015675:5607297:563200956320095632224216Mesorhizobium opportunistum WSM2075 chromosome, complete genomephage transcriptional regulator AlpA2e-0754.7
NC_017033:2081206:210752221075222107743222Frateuria aurantia DSM 6220 chromosome, complete genomeputative transcriptional regulator2e-0754.3
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein2e-0754.3
NC_006511:4465495:446677144667714467101331Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-0753.5
NC_007925:138927:166679166679166894216Rhodopseudomonas palustris BisB18, complete genomephage transcriptional regulator, AlpA4e-0753.5
NC_017270:1755552:178876517887651788965201Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator, AlpA like protein4e-0753.5
NC_015381:3607626:360814736081473608338192Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein4e-0753.5
NC_004578:3849835:386503638650363865278243Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA-binding protein, putative4e-0753.5
NC_011147:4460726:446200144620014462267267Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-0753.1
NC_020829:5174354:518228151822815182514234Pseudomonas denitrificans ATCC 13867, complete genomeDNA-binding protein6e-0752.8
NC_008435:1131242:116366511636651163880216Rhodopseudomonas palustris BisA53, complete genomephage transcriptional regulator, AlpA6e-0752.8
NC_012668:1688500:169464616946461694876231Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-0752.8
NC_010322:5293652:531510753151075315289183Pseudomonas putida GB-1 chromosome, complete genomephage transcriptional regulator AlpA9e-0752.4
NC_011080:4703266:471759947175994717859261Salmonella enterica subsp. enterica serovar Newport str. SL254,phage transcriptional regulator, AlpA8e-0752.4
NC_009439:1297851:130657513065751306763189Pseudomonas mendocina ymp, complete genomephage transcriptional regulator, AlpA8e-0752.4
NC_003143:2137945:213871521387152138996282Yersinia pestis CO92, complete genomeputative transcriptional regulator1e-0652
NC_008150:1420825:142179414217941422075282Yersinia pestis Antiqua, complete genomehypothetical protein1e-0652
NC_005810:1794490:179545917954591795740282Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator1e-0652
NC_008321:1993541:201135520113552011549195Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA1e-0652
NC_010634:1916000:191718019171801917365186Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA1e-0652
NC_009381:1362471:139729913972991397484186Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator1e-0652
NC_012731:3411161:342822134282213428406186Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulator1e-0652
NC_004631:4661000:467373846737384674061324Salmonella enterica subsp. enterica serovar Typhi Ty2, completephage DNA binding protein2e-0651.6
NC_003198:4676536:469084946908494691172324Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage DNA binding protein2e-0651.6
NC_010498:4072681:408781140878114088077267Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator2e-0651.6
NC_010468:1130000:115080511508051151071267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA2e-0651.6
NC_007613:4217557:422168542216854221951267Shigella boydii Sb227, complete genomehypothetical protein2e-0651.6
NC_011740:448000:452630452630452896267Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein of bacteriophage origin, putative COG3311, putative DNA binding2e-0651.6
NC_013361:4959323:495991949599194960185267Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA binding transcriptional regulator2e-0651.6
NC_002695:301939:318189318189318449261Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein1e-0651.6
NC_002655:301940:318190318190318450261Escherichia coli O157:H7 EDL933, complete genomeputative regulatory protein encoded in prophage CP-933I1e-0651.6
NC_011353:305820:322069322069322329261Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage DNA binding protein1e-0651.6
NC_013008:306953:323381323381323641261Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulatory protein encoded in prophage CP-933I1e-0651.6
NC_013941:338121:359163359163359423261Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage DNA binding protein1e-0651.6
NC_010468:49074:496614966149927267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA2e-0651.6
NC_010170:4800000:480598048059804806240261Bordetella petrii, complete genomePredicted transcriptional regulator2e-0651.2
NC_009720:251703:276787276787277002216Xanthobacter autotrophicus Py2, complete genomephage transcriptional regulator, AlpA2e-0650.8
NC_015424:3520783:355680435568043556980177Aeromonas veronii B565 chromosome, complete genomeputative transcriptional regulator2e-0650.8
NC_003295:998000:101150510115051011771267Ralstonia solanacearum GMI1000, complete genomePUTATIVE BACTERIOPHAGE DNA-BINDING TRANSCRIPTION REGULATOR PROTEIN2e-0650.8
NC_016857:2871689:289653928965392896805267Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage DNA binding protein3e-0650.4
NC_011080:2870428:288471228847122884978267Salmonella enterica subsp. enterica serovar Newport str. SL254,phage DNA binding protein3e-0650.4
NC_010102:2862178:286427828642782864544267Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0650.4
NC_009436:3367194:338079433807943381060267Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA4e-0650.1
NC_004547:1873390:188101818810181881212195Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative prophage regulatory protein4e-0650.1
NC_013508:3593000:360746636074663607687222Edwardsiella tarda EIB202, complete genomehypothetical protein5e-0649.7
NC_014121:677799:691347691347691613267Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage transcriptional regulator, AlpA5e-0649.7
NC_015224:3291736:331240633124063312600195Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage transcriptional regulator, AlpA7e-0649.3
NC_013592:2968500:299374929937492993943195Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA8e-0649.3
NC_010676:2793237:279827727982772798510234Burkholderia phytofirmans PsJN chromosome 2, complete sequencephage transcriptional regulator, AlpA8e-0648.9
NC_020260:603796:634711634711634926216Cronobacter sakazakii Sp291, complete genomephage transcriptional regulator AlpA9e-0648.9
NC_015379:2417312:246348524634852463706222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, AlpA family9e-0648.9