Pre_GI: BLASTP Hits

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Query: NC_011205:2462025:2485429 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2485429, End: 2486481, Length: 1053

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016894:2809125:2824446282444628255251080Acetobacterium woodii DSM 1030 chromosome, complete genomethiamin biosynthesis lipoprotein ApbE1e-22107
NC_010163:63209:6379163791648731083Acholeplasma laidlawii PG-8A chromosome, complete genomethiamine biosynthesis lipoprotein6e-1065.5
NC_013171:1364464:1375597137559713767661170Anaerococcus prevotii DSM 20548, complete genomeApbE family lipoprotein6e-22105
NC_017243:2955597:2956671295667129576721002Brachyspira intermedia PWS/A chromosome, complete genomethiamine biosynthesis lipoprotein apbE1e-30134
NC_018604:2579000:2632624263262426336371014Brachyspira pilosicoli WesB complete genomethiamine biosynthesis lipoprotein apbE precursor3e-30132
NC_004545:229771:2444692444692454941026Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative thiamine biosynthesis protein ApbE precursor3e-72272
NC_014758:579741:582695582695583633939Calditerrivibrio nitroreducens DSM 19672 chromosome, completeapbe family lipoprotein1e-1894.4
NC_009465:29735:506345063451548915Candidatus Vesicomyosocius okutanii HA, complete genomethiamin biosynthesis lipoprotein ApbE9e-34144
NC_015391:2488450:249492524949252495803879Carnobacterium sp. 17-4 chromosome, complete genomeputative ApbE lipoprotein family6e-23108
NC_010831:1224000:1227068122706812280841017Chlorobium phaeobacteroides BS1, complete genomeApbE family lipoprotein1e-23111
NC_009697:419443:4298244298244308581035Clostridium botulinum A str. ATCC 19397 chromosome, completeapbE family protein3e-31136
NC_008261:2743942:2762442276244227634701029Clostridium perfringens ATCC 13124, complete genomeApbE family protein7e-32138
NC_008261:2614817:2627910262791026289411032Clostridium perfringens ATCC 13124, complete genomeputative thiamin biosynthesis lipoprotein ApbE4e-32139
NC_014376:869749:8861788861788871791002Clostridium saccharolyticum WM1 chromosome, complete genomeApbE family lipoprotein2e-26119
NC_020291:902635:9142149142149152661053Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomethiamine biosynthesis lipoprotein ApbE4e-33142
NC_009012:686740:6889316889316899771047Clostridium thermocellum ATCC 27405, complete genomeApbE-like lipoprotein2e-26120
NC_006138:857692:8730558730558740921038Desulfotalea psychrophila LSv54, complete genomesimilar to thiamine biosynthesis lipoprotein (ApbE) [Precursor]8e-23108
NC_015589:814530:8198638198638209181056Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeApbE family lipoprotein6e-29128
NC_020409:584000:5997725997726019552184Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeApbE family lipoprotein2e-0963.5
NC_012880:3645304:366583536658353666812978Dickeya dadantii Ech703, complete genomeApbE family lipoprotein2e-21103
NC_011661:1100576:1118541111854111195601020Dictyoglomus turgidum DSM 6724, complete genomeApbE family lipoprotein3e-32139
NC_014618:1809369:181220418122041813157954Enterobacter cloacae SCF1 chromosome, complete genomeApbE family lipoprotein6e-32138
NC_017316:2637707:2655246265524626563131068Enterococcus faecalis OG1RF chromosome, complete genomethiamine biosynthesis lipoprotein1e-23110
NC_004668:3118500:3132588313258831336551068Enterococcus faecalis V583, complete genomethiamin biosynthesis lipoprotein ApbE, putative1e-23110
NC_013971:2408522:2434786243478624358411056Erwinia amylovora ATCC 49946 chromosome, complete genomethiamine biosynthesis lipoprotein2e-125449
NC_013971:1660144:166299416629941663962969Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein5e-26119
NC_013961:1622616:162546616254661626434969Erwinia amylovora, complete genomeThiamine biosynthesis lipoprotein apbE precursor5e-26119
NC_013961:2370994:239725823972582398199942Erwinia amylovora, complete genomeThiamine biosynthesis lipoprotein apbE precursor4e-123441
NC_012214:2221702:226589922658992266867969Erwinia pyrifoliae Ep1/96, complete genomePutative thiamine biosynthesis protein1e-28127
NC_010694:2138000:217697121769712177939969Erwinia tasmaniensis, complete genomePutative thiamine biosynthesis protein2e-28127
NC_009441:4449500:445372444537244454674951Flavobacterium johnsoniae UW101 chromosome, complete genomeApbE family lipoprotein4e-26119
NC_010814:3048441:3086124308612430871701047Geobacter lovleyi SZ, complete genomeApbE family lipoprotein4e-56218
NC_015717:2479394:2482210248221024832381029Hyphomicrobium sp. MC1, complete genomeputative Thiamine biosynthesis lipoprotein ApbE-like4e-36152
NC_014962:4538122:4538122453812245392251104Isosphaera pallida ATCC 43644 chromosome, complete genomeApbE family lipoprotein2e-26120
NC_008526:565902:581748581748582665918Lactobacillus casei ATCC 334, complete genomeThiamine biosynthesis membrane-associated lipoprotein2e-1066.6
NC_010999:623489:630954630954631871918Lactobacillus casei, complete genomeThiamine biosynthesis lipoprotein2e-1066.6
NC_008555:2597980:2614161261416126152431083Listeria welshimeri serovar 6b str. SLCC5334, complete genomethiamine biosynthesis lipoprotein, putative8e-28124
NC_015276:2852010:2854930285493028559431014Marinomonas mediterranea MMB-1 chromosome, complete genomeApbE family lipoprotein2e-62239
NC_007955:1464000:1476977147697714780291053Methanococcoides burtonii DSM 6242, complete genomeApbE-like lipoprotein3e-24112
NC_011894:3161289:319972331997233200685963Methylobacterium nodulans ORS 2060, complete genomeApbE family lipoprotein2e-32139
NC_010511:3160123:317116931711693172161993Methylobacterium sp. 4-46 chromosome, complete genomeApbE family lipoprotein7e-1685.1
NC_010718:517473:5346145346145356751062Natranaerobius thermophilus JW/NM-WN-LF, complete genomeApbE family lipoprotein4e-32139
NC_016609:6361862:6369588636958863705921005Niastella koreensis GR20-10 chromosome, complete genomeApbE family lipoprotein1e-41170
NC_013960:2662458:266533226653322666300969Nitrosococcus halophilus Nc4 chromosome, complete genomeApbE family lipoprotein3e-22106
NC_014315:1169910:117491811749181175886969Nitrosococcus watsoni C-113 chromosome, complete genomeApbE family lipoprotein1e-20101
NC_016048:693416:692478692478693437960Oscillibacter valericigenes Sjm18-20, complete genomeputative thiamine biosynthesis lipoprotein2e-27123
NC_016002:2946702:2953415295341529544221008Pseudogulbenkiania sp. NH8B, complete genomeApbE family lipoprotein9e-40164
NC_016002:3813039:3818468381846838195441077Pseudogulbenkiania sp. NH8B, complete genomeNosX protein5e-1892
NC_017986:5421000:544017154401715441136966Pseudomonas putida ND6 chromosome, complete genomeApbE family lipoprotein8e-41167
NC_007348:1903937:190393719039371904920984Ralstonia eutropha JMP134 chromosome 2, complete sequenceApbE-like lipoprotein2e-40166
NC_014307:2760347:279436427943642795260897Ralstonia solanacearum CFBP2957 chromosome, complete genomeapbe-like lipoprotein1e-0654.7
NC_011149:2294500:2315759231575923168111053Salmonella enterica subsp. enterica serovar Agona str. SL483,thiamine biosynthesis lipoprotein ApbE0694
NC_006905:2355290:2378560237856023796121053Salmonella enterica subsp. enterica serovar Choleraesuis strputative thiamine biosynthesis lipoprotein0694
NC_011294:2334979:2358343235834323593951053Salmonella enterica subsp. enterica serovar Enteritidis strthiamine biosynthesis lipoprotein ApbE0696
NC_011274:2325840:2349212234921223502641053Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91thiamine biosynthesis lipoprotein ApbE0696
NC_011083:2375061:2411839241183924128911053Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,thiamine biosynthesis lipoprotein ApbE0694
NC_011080:2342672:2366039236603923670911053Salmonella enterica subsp. enterica serovar Newport str. SL254,thiamine biosynthesis lipoprotein ApbE0693
NC_011094:2348491:2370054237005423711061053Salmonella enterica subsp. enterica serovar Schwarzengrund strthiamine biosynthesis lipoprotein ApbE0692
NC_003198:2297837:2321227232122723222791053Salmonella enterica subsp. enterica serovar Typhi str. CT18,thiamine biosynthesis protein0693
NC_016860:2323017:2359819235981923608711053Salmonella enterica subsp. enterica serovar Typhimurium strthiamine biosynthesis lipoprotein ApbE0696
NC_016810:2325190:2361992236199223630441053Salmonella enterica subsp. enterica serovar Typhimurium strthiamine biosynthesis protein0696
NC_016856:2379027:2415829241582924168811053Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sthiamine biosynthesis lipoprotein ApbE0696
NC_017046:2324554:2361356236135623624081053Salmonella enterica subsp. enterica serovar Typhimurium str. 798thiamine biosynthesis protein0696
NC_016857:2325190:2361992236199223630441053Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74thiamine biosynthesis lipoprotein ApbE0696
NC_016863:2324293:2364021236402123650731053Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1thiamine biosynthesis lipoprotein ApbE0696
NC_009832:3703202:3719469371946937205001032Serratia proteamaculans 568, complete genomeApbE family lipoprotein8e-110397
NC_004347:4441110:4462599446259944636571059Shewanella oneidensis MR-1, complete genomeapbE family protein5e-48191
NC_010506:4404377:4405934440593444069501017Shewanella woodyi ATCC 51908, complete genomeApbE family lipoprotein3e-70265
NC_013959:83992:1075501075501085811032Sideroxydans lithotrophicus ES-1 chromosome, complete genomeApbE family lipoprotein1e-1997.8
NC_019892:3366463:3368995336899533700561062Singulisphaera acidiphila DSM 18658 chromosome, complete genomemembrane-associated lipoprotein3e-22106
NC_015594:214500:239699239699240655957Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeApbE family lipoprotein2e-28127
NC_009442:1446508:1464208146420814652361029Streptococcus suis 05ZYH33 chromosome, complete genomethiamine biosynthesis lipoprotein2e-20100
NC_009443:1445936:1463628146362814646561029Streptococcus suis 98HAH33, complete genomethiamine biosynthesis lipoprotein2e-20100
NC_012926:1496510:1514229151422915152571029Streptococcus suis BM407 chromosome, complete genomeApbE family protein2e-20100
NC_012925:1357783:1375481137548113765091029Streptococcus suis P1/7, complete genomeApbE family protein2e-20100
NC_012924:1446190:1463889146388914649171029Streptococcus suis SC84, complete genomeApbE family protein2e-20100
NC_016884:1201868:122219512221951223136942Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeApbE family lipoprotein1e-0654.3
NC_016052:82358:8577485774868771104Tetragenococcus halophilus NBRC 12172, complete genomeApbE family protein3e-22106
NC_014377:669216:6863816863816874151035Thermosediminibacter oceani DSM 16646 chromosome, complete genomeApbE family lipoprotein3e-30132
NC_009828:469778:4687424687424697941053Thermotoga lettingae TMO, complete genomeApbE family lipoprotein1e-1894.4
NC_015577:3244857:3261655326165532626801026Treponema azotonutricium ZAS-9 chromosome, complete genomeApbE family protein2e-30133
NC_002967:2656000:2656108265610826572231116Treponema denticola ATCC 35405, complete genomeApbE family protein1e-31137
NC_012792:962292:980839980839981633795Variovorax paradoxus S110 chromosome 2, complete genomeApbE family lipoprotein2e-1066.6
NC_015434:3581001:358491235849123585778867Verrucosispora maris AB-18-032 chromosome, complete genomeApbE family lipoprotein1e-0757.8
NC_017168:2158839:2161351216135121623731023Yersinia pestis A1122 chromosome, complete genomeApbE family lipoprotein2e-70266
NC_010159:3502350:351850435185043519499996Yersinia pestis Angola, complete genomeputative thiamine biosynthesis lipoprotein apbE3e-70265
NC_008150:3015000:3031272303127230323511080Yersinia pestis Antiqua, complete genomethiamine biosynthesis lipoprotein2e-70266
NC_017265:3375463:3391934339193433929561023Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative thiamine biosynthesis lipoprotein2e-70266
NC_005810:754340:7576427576427587241083Yersinia pestis biovar Microtus str. 91001, complete genomethiamine biosynthesis lipoprotein2e-70266
NC_003143:3583468:3599594359959436006161023Yersinia pestis CO92, complete genomethiamine biosynthesis lipoprotein2e-70266
NC_017154:3576256:359238235923823593377996Yersinia pestis D106004 chromosome, complete genomeputative thiamine biosynthesis lipoprotein apbE3e-70265
NC_017160:3560153:357627935762793577274996Yersinia pestis D182038 chromosome, complete genomeputative thiamine biosynthesis lipoprotein apbE3e-70265
NC_004088:1075454:1077906107790610789881083Yersinia pestis KIM, complete genomehypothetical protein2e-70266
NC_008149:1002453:1004908100490810059871080Yersinia pestis Nepal516, complete genomethiamine biosynthesis lipoprotein2e-70266
NC_009381:3228500:3243858324385832449371080Yersinia pestis Pestoides F chromosome, complete genomethiamine biosynthesis lipoprotein2e-70266
NC_014029:3633955:365008136500813651076996Yersinia pestis Z176003 chromosome, complete genomeputative thiamine biosynthesis lipoprotein apbE3e-70265
NC_009708:3542336:3558462355846235594991038Yersinia pseudotuberculosis IP 31758 chromosome, complete genomethiamine biosynthesis lipoprotein apbE2e-70266
NC_006155:1074298:1077603107760310786251023Yersinia pseudotuberculosis IP 32953, complete genomethiamine biosynthesis lipoprotein2e-70266
NC_010634:1056441:1059689105968910607681080Yersinia pseudotuberculosis PB1/+, complete genomeApbE family lipoprotein2e-70266
NC_010465:3597000:3612319361231936133981080Yersinia pseudotuberculosis YPIII, complete genomeApbE family lipoprotein2e-70266
NC_015709:1459838:1506639150663915076851047Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeApbE family lipoprotein1e-22107