Pre_GI: BLASTP Hits

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Query: NC_007384:2007467:2035845 Shigella sonnei Ss046, complete genome

Start: 2035845, End: 2036492, Length: 648

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. A leading cause of dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. This extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:2647984:265585526558552656502648Enterobacter cloacae EcWSU1 chromosome, complete genomemembrane protein YhcE8e-109392
NC_015968:2583721:259136725913672592014648Enterobacter asburiae LF7a chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein7e-108389
NC_020260:1535394:154815615481561548794639Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-105381
NC_009778:1477841:148925114892511489889639Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-105381
NC_013850:2103469:211302821130282113675648Klebsiella variicola At-22 chromosome, complete genomemultiple antibiotic resistance (MarC)-related protein2e-104378
NC_004088:2227278:223232222323222232966645Yersinia pestis KIM, complete genomechannel protein1e-97355
NC_008150:1705152:172804917280491728693645Yersinia pestis Antiqua, complete genomehypothetical protein1e-97355
NC_003143:2433190:245608724560872456731645Yersinia pestis CO92, complete genomehypothetical protein1e-97355
NC_010159:2252380:226331822633182263962645Yersinia pestis Angola, complete genomehypothetical protein1e-97355
NC_008149:1842500:186471018647101865354645Yersinia pestis Nepal516, complete genomemembrane protein1e-97355
NC_005810:2180303:220195522019552202599645Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-97355
NC_009381:1064227:108013810801381080782645Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-97355
NC_014029:2138000:215677321567732157417645Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-97355
NC_017154:2430093:245298824529882453632645Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-97355
NC_017160:2054289:208436520843652085009645Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-97355
NC_017168:3290380:330566233056623306306645Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-97355
NC_017265:1765399:177122217712221771866645Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-97355
NC_006155:2461262:248163024816302482274645Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-97354
NC_010634:2376245:239813523981352398779645Yersinia pseudotuberculosis PB1/+, complete genomemultiple antibiotic resistance (MarC)-related protein2e-97354
NC_010465:2282874:229946722994672300111645Yersinia pseudotuberculosis YPIII, complete genomemultiple antibiotic resistance (MarC)-related protein2e-97354
NC_009708:2245586:226218122621812262825645Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-97354
NC_009832:2969376:297744729774472978091645Serratia proteamaculans 568, complete genomemultiple antibiotic resistance (MarC)-related protein6e-97353
NC_014306:2703544:271056027105602711207648Erwinia billingiae Eb661, complete genomeMultiple antibiotic resistance (MarC)-related protein8e-97352
NC_015061:2867027:287291128729112873555645Rahnella sp. Y9602 chromosome, complete genomemultiple antibiotic resistance (MarC)-related protein1e-94345
NC_014121:1653385:166307116630711663619549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-89328
NC_011663:2813033:282844728284472829079633Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-59228
NC_009438:2058566:206149620614962062128633Shewanella putrefaciens CN-32 chromosome, complete genomehypothetical protein2e-58225
NC_008321:1993541:199645919964591997091633Shewanella sp. MR-4, complete genomemultiple antibiotic resistance (MarC)-related proteins2e-58225
NC_008577:2115440:211544021154402116072633Shewanella sp. ANA-3 chromosome 1, complete sequencemultiple antibiotic resistance (MarC)-related proteins2e-58225
NC_008322:2077628:207762820776282078260633Shewanella sp. MR-7, complete genomemultiple antibiotic resistance (MarC)-related proteins5e-58224
NC_002689:46243:653356533565973639Thermoplasma volcanium GSS1, complete genomeIntegral membrane protein (MarC family)1e-31135
NC_006624:1448165:145273214527321453382651Thermococcus kodakarensis KOD1, complete genomesmall neutral amino acid transporter1e-24112
NC_015416:1679188:170997017099701710617648Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein2e-23108
NC_007498:197810:202655202655203287633Pelobacter carbinolicus DSM 2380, complete genomeconserved hypothetical protein TIGR004277e-23107
NC_014618:2423661:242675224267522427420669Enterobacter cloacae SCF1 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein1e-21103
CP002185:1727493:173093117309311731596666Escherichia coli W, complete genomeconserved protein4e-21101
CP002516:2361628:237425923742592374924666Escherichia coli KO11, complete genomemultiple antibiotic resistance (MarC)-related protein4e-21101
CU928160:1625535:162897316289731629638666Escherichia coli IAI1 chromosome, complete genomeputative wide-spectrum exporter4e-21101
NC_011415:1715644:171908217190821719747666Escherichia coli SE11 chromosome, complete genomemultiple drug resistance protein MarC4e-21101
NC_011741:1625535:162897316289731629638666Escherichia coli IAI1 chromosome, complete genomemultiple drug resistance protein MarC4e-21101
NC_016902:2361628:237425923742592374924666Escherichia coli KO11FL chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein4e-21101
NC_008563:1651270:165618416561841656849666Escherichia coli APEC O1, complete genomeMultiple antibiotic resistance protein MarC3e-21101
NC_009800:1632585:163506516350651635730666Escherichia coli HS, complete genomemultiple antibiotic resistance protein MarC5e-21100
NC_013926:614206:615458615458616072615Aciduliprofundum boonei T469 chromosome, complete genomemultiple antibiotic resistance (MarC)-related protein7e-21100
NC_010498:1615980:163022516302251630890666Escherichia coli SMS-3-5, complete genomemultiple antibiotic resistance protein MarC1e-2099.8
NC_011761:2641481:268948126894812690113633Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeMarC family integral membrane protein6e-2097.4
NC_011206:2549132:258927825892782589952675Acidithiobacillus ferrooxidans ATCC 53993, complete genomemultiple antibiotic resistance (MarC)-related protein7e-2097.4
NC_013421:1173051:119772411977241198398675Pectobacterium wasabiae WPP163, complete genomemultiple antibiotic resistance (MarC)-related protein8e-2097.1
NC_011146:482440:504333504333504992660Geobacter bemidjiensis Bem, complete genomemultiple antibiotic resistance (MarC)-related protein2e-1995.5
NC_009654:3316458:333203433320343332651618Marinomonas sp. MWYL1, complete genomemultiple antibiotic resistance (MarC)-related protein3e-1995.1
NC_009381:775357:805811805811806494684Yersinia pestis Pestoides F chromosome, complete genomemultiple drug resistance protein MarC4e-1994.7
NC_010067:1414000:141717014171701417835666Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1994.7
NC_008609:1394377:140972414097241410332609Pelobacter propionicus DSM 2379, complete genomemultiple antibiotic resistance (MarC)-related proteins1e-1893.2
NC_016816:3974895:399292939929293993597669Pantoea ananatis LMG 5342, complete genomemultiple drug resistance protein MarC3e-1892
NC_013956:595320:600692600692601360669Pantoea ananatis LMG 20103 chromosome, complete genomeMarC3e-1891.7
NC_020211:996497:102133310213331021974642Serratia marcescens WW4, complete genomemultiple antibiotic resistance protein MarC2e-1789.4
NC_008525:606986:610660610660611283624Pediococcus pentosaceus ATCC 25745, complete genomeMultiple antibiotic transporter4e-1787.8
NC_014758:1387470:139748713974871398074588Calditerrivibrio nitroreducens DSM 19672 chromosome, completemultiple antibiotic resistance (marc)-related protein3e-1685.5
NC_002929:2589202:260863626086362609295660Bordetella pertussis Tohama I, complete genomepossible membrane efflux protein2e-1685.5
NC_002927:4130697:414644041464404147099660Bordetella bronchiseptica RB50, complete genomepossible membrane efflux protein2e-1685.5
NC_017223:2618535:263327226332722633931660Bordetella pertussis CS chromosome, complete genomemembrane efflux protein2e-1685.5
NC_009937:1733196:175142217514221752105684Azorhizobium caulinodans ORS 571, complete genomemultiple antibiotic resistance (MarC)-related protein5e-1684.3
NC_007912:3921308:392279439227943923417624Saccharophagus degradans 2-40, complete genomeMCP methyltransferase, CheR-type9e-1683.6
NC_014961:490551:507318507318507929612Desulfurococcus mucosus DSM 2162 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein2e-1582.8
NC_008818:1244612:127110012711001271717618Hyperthermus butylicus DSM 5456, complete genomepredicted transporter protein2e-1582.4
NC_002928:3715492:373109237310923731832741Bordetella parapertussis 12822, complete genomepossible membrane efflux protein2e-1582
NC_018677:329829:336249336249336893645Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeMultiple antibiotic resistance protein MarC3e-1581.6
NC_018507:339000:342832342832343476645Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomemultiple antibiotic transporter3e-1581.6
NC_012881:3362955:336361133636113364222612Desulfovibrio salexigens DSM 2638, complete genomemultiple antibiotic resistance (MarC)-related protein5e-1581.3
NC_007645:1698803:172789417278941728502609Hahella chejuensis KCTC 2396, complete genomeMultiple antibiotic transporter6e-1580.9
NC_007794:262402:286443286443287063621Novosphingobium aromaticivorans DSM 12444, complete genomemultiple antibiotic resistance (MarC)-related proteins1e-1480.1
NC_020054:4550000:456077045607704561351582Fibrella aestuarina BUZ 2 drat genomemultiple antibiotic resistance (MarC)-related protein2e-1479.3
NC_012559:2663747:266668426666842667289606Laribacter hongkongensis HLHK9, complete genomeMultiple antibiotic resistance (MarC)-related protein2e-1375.9
NC_000961:172610:189078189078189686609Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1375.5
NC_017249:2073558:208323220832322083867636Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1272.8
NC_015856:633353:649587649587650264678Collimonas fungivorans Ter331 chromosome, complete genomeputative multiple antibiotic resistance protein MarC2e-1272.8
NC_011979:3409610:340961034096103410209600Geobacter sp. FRC-32, complete genomemultiple antibiotic resistance (MarC)-related protein3e-1271.6
NC_010515:1124298:114726911472691147931663Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemultiple antibiotic resistance (MarC)-related protein5e-1271.2
NC_014484:1690272:169559216955921696179588Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein5e-1271.2
NC_003413:128228:135009135009135623615Pyrococcus furiosus DSM 3638, complete genomehypothetical protein7e-1270.9
NC_009033:295517:304309304309304899591Staphylothermus marinus F1, complete genomemultiple antibiotic resistance (MarC)-related proteins7e-1270.9
NC_009485:8138314:818032681803268180934609Bradyrhizobium sp. BTAi1 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein8e-1270.5
NC_014246:536338:552024552024552674651Mobiluncus curtisii ATCC 43063 chromosome, complete genomeMarC family multiple antibiotic resistance transporter7e-1270.5
NC_007952:1934249:193875519387551939432678Burkholderia xenovorans LB400 chromosome 2, complete sequenceMultiple antibiotic resistance (MarC)- related proteins1e-1170.1
NC_000868:196015:203150203150203758609Pyrococcus abyssi GE5, complete genomehypothetical protein1e-1169.7
NC_016885:2091918:213120721312072131797591Pyrobaculum oguniense TE7 chromosome, complete genomeMultiple antibiotic transporter8e-1167
NC_010804:450130:475395475395476003609Burkholderia multivorans ATCC 17616 chromosome 1, completeMarC family integral membrane protein1e-1067
NC_016645:1838405:188618418861841886765582Pyrobaculum sp. 1860 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein3e-1065.5
NC_017275:1436875:146473414647341465342609Sulfolobus islandicus HVE10/4 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein2e-1065.5
NC_013769:1478546:150640415064041507012609Sulfolobus islandicus L.D.8.5 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein5e-1064.3
NC_012632:1543735:154637815463781546986609Sulfolobus islandicus M.16.27 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein5e-1064.3
NC_012623:1141951:115817811581781158786609Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemultiple antibiotic resistance (MarC)-related K3116protein5e-1064.3
NC_012622:1395601:139930613993061399914609Sulfolobus islandicus Y.G.57.14 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein5e-1064.3
NC_012588:1419318:142196114219611422569609Sulfolobus islandicus M.14.25 chromosome, complete genomemultiple antibiotic resistance (MarC)-like protein5e-1064.3
NC_012589:1502390:150993315099331510541609Sulfolobus islandicus L.S.2.15, complete genomemultiple antibiotic resistance (MarC)-related protein5e-1064.3
NC_015474:644552:651776651776652387612Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein1e-0963.5
NC_012804:271459:288925288925289539615Thermococcus gammatolerans EJ3, complete genomeMultiple antibiotic resistance (Mar)-related protein1e-0963.5
NC_002754:513790:530647530647531255609Sulfolobus solfataricus P2, complete genomehypothetical protein9e-1063.5
NC_015865:1260461:127741512774151278029615Thermococcus sp. 4557 chromosome, complete genomehypothetical protein9e-1063.5
NC_016051:1681076:170719417071941707808615Thermococcus sp. AM4 chromosome, complete genomehypothetical protein2e-0962.8
NC_016629:2561000:257873425787342579315582Desulfovibrio africanus str. Walvis Bay chromosome, completemultiple antibiotic resistance (MarC)-like protein3e-0962
NC_017267:2955946:297661329766132977212600Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completemultiple antibiotic resistance protein MarC9e-0960.5
NC_005043:1143557:115476711547671155375609Chlamydophila pneumoniae TW-183, complete genomehypothetical protein7e-0960.5
NC_000922:1147855:115906411590641159672609Chlamydophila pneumoniae CWL029, complete genomehypothetical protein7e-0960.5
NC_017285:913000:918907918907919515609Chlamydophila pneumoniae LPCoLN chromosome, complete genomeintegral membrane protein, MarC family7e-0960.5
NC_007705:3429493:344924734492473449846600Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein1e-0859.7
NC_010717:3564955:358461235846123585211600Xanthomonas oryzae pv. oryzae PXO99A, complete genomemultiple antibiotic resistance protein MarC1e-0859.7
NC_007508:3183631:321532932153293215928600Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative MarC transporter family protein2e-0859.7
NC_002491:1147169:115547011554701156078609Chlamydophila pneumoniae J138, complete genomehypothetical protein2e-0859.3
NC_002179:904518:911742911742912350609Chlamydophila pneumoniae AR39, complete genomehypothetical protein2e-0859.3
NC_003919:3113343:313426531342653134864600Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-0859.3
NC_017271:2935643:299106129910612991660600Xanthomonas campestris pv. raphani 756C chromosome, completemultiple antibiotic resistance protein MarC4e-0858.2
NC_007086:1936505:193963519396351940234600Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-0858.2
NC_010688:1908012:191114119111411911740600Xanthomonas campestris pv. campestris, complete genomePutative MarC transporter family protein4e-0858.2
NC_012912:242709:261811261811262404594Dickeya zeae Ech1591, complete genomemultiple antibiotic resistance (MarC)-related protein4e-0858.2
NC_003106:1457802:147445814744581475066609Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-0858.2