Pre_GI Gene

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Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:3921308 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39213083921841534hypothetical proteinBLASTP
39219143922267354response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
39223323922703372hypothetical proteinBLASTP
39227943923417624MCP methyltransferase CheR-typeQuickGO ontologyBLASTP
39236913924410720methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
392505739267451689CheW proteinQuickGO ontology
39268773927854978CheW proteinQuickGO ontologyBLASTP
39280103928651642response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
39293633929803441hypothetical protein
392993539310681134response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
39315723931973402methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
39321233932821699methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
393313339341791047serinethreonine protein kinaseQuickGO ontologyBLASTP
39341723934630459hypothetical proteinBLASTP
39347603935419660PASPAC sensor signal transduction histidine kinaseQuickGO ontology
39355543936453900hypothetical proteinBLASTP
39371613937481321hypothetical protein
39376413938120480response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP