Pre_GI: BLASTP Hits

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Query: NC_004337:2185282:2185282 Shigella flexneri 2a str. 301, complete genome

Start: 2185282, End: 2186247, Length: 966

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:2225418:222751022275102228475966Shigella flexneri 2002017 chromosome, complete genomeputative kinase4e-165580
CP002185:2347413:234968823496882350653966Escherichia coli W, complete genomepredicted kinase2e-162571
NC_002695:2854629:285462928546292855594966Escherichia coli O157:H7 str. Sakai, complete genomeputative kinase8e-162569
NC_002655:2925787:292484829248482925813966Escherichia coli O157:H7 EDL933, complete genomeputative kinase8e-162569
NC_011353:2852362:285142328514232852388966Escherichia coli O157:H7 str. EC4115 chromosome, complete genomekinase, PfkB family8e-162569
NC_013008:2851342:285040328504032851368966Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase8e-162569
NC_011745:2399313:240031424003142401279966Escherichia coli ED1a chromosome, complete genomeputative kinase1e-161568
NC_011741:2239637:224063822406382241603966Escherichia coli IAI1 chromosome, complete genomeputative kinase1e-155549
CU928160:2239637:224063822406382241603966Escherichia coli IAI1 chromosome, complete genomeputative kinase1e-155549
NC_010473:2267851:227012622701262271091966Escherichia coli str. K-12 substr. DH10B, complete genomepredicted kinase5e-155547
AC_000091:2185369:218443021844302185395966Escherichia coli W3110 DNA, complete genomepredicted kinase5e-155547
NC_012759:2069326:207160120716012072566966Escherichia coli BW2952 chromosome, complete genomeputative kinase5e-155547
NC_007384:2251792:225279322527932253758966Shigella sonnei Ss046, complete genomeputative kinase3e-155547
NC_016822:2341127:234212823421282343093966Shigella sonnei 53G, complete genomekinase3e-155547
NC_011750:955451:974220974220975185966Escherichia coli IAI39 chromosome, complete genomeputative kinase2e-154545
NC_010468:1694729:171293617129361713901966Escherichia coli ATCC 8739, complete genome4e-154544
NC_009792:642881:658010658010658975966Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-132471
NC_004631:799810:798848798848799813966Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative sugar kinase4e-119427
NC_003198:2179688:220412322041232205088966Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative sugar kinase4e-119427
NC_016832:799764:798802798802799767966Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,putative sugar kinase yegV4e-119427
NC_011149:2179592:220413022041302205095966Salmonella enterica subsp. enterica serovar Agona str. SL483,kinase, PfkB family1e-118426
NC_012125:1632150:163118816311881632153966Salmonella enterica subsp. enterica serovar Paratyphi C strainsugar kinase1e-118426
NC_006905:2235607:226105822610582262023966Salmonella enterica subsp. enterica serovar Choleraesuis strputative sugar kinase1e-118426
NC_011147:792489:791527791527792492966Salmonella enterica subsp. enterica serovar Paratyphi A strsugar kinase3e-118425
NC_006511:792543:791581791581792546966Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative sugar kinase3e-118425
NC_015968:3053565:306856830685683069524957Enterobacter asburiae LF7a chromosome, complete genomePfkB domain-containing protein4e-115414
NC_014121:3483976:348755634875563488509954Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative sugar kinase5e-112404
NC_012779:1820244:183133318313331832274942Edwardsiella ictaluri 93-146, complete genomekinase, PfkB family3e-44179
NC_015500:2417041:243418624341862435100915Treponema brennaborense DSM 12168 chromosome, complete genomePfkB domain protein5e-34145
NC_014246:1579811:160210616021061603041936Mobiluncus curtisii ATCC 43063 chromosome, complete genomecarbohydrate kinase3e-1376.3
NC_010816:1274702:1279971127997112809871017Bifidobacterium longum DJO10A, complete genomeRibokinase family sugar kinase2e-1273.6
NC_000854:1:890889089840933Aeropyrum pernix K1, complete genomeATP-dependent 6-phosphofructokinase2e-1273.6
NC_014961:335808:347856347856348779924Desulfurococcus mucosus DSM 2162 chromosome, complete genome6-phosphofructokinase5e-1272
NC_008525:1202852:122570312257031226614912Pediococcus pentosaceus ATCC 25745, complete genomeSugar kinase, ribokinase family3e-0963.2
NC_014377:1871333:188402018840201884979960Thermosediminibacter oceani DSM 16646 chromosome, complete genomePfkB domain protein6e-0962
NC_016645:1909507:193030519303051931222918Pyrobaculum sp. 1860 chromosome, complete genomesugar kinase, possible phosphofructokinase1e-0860.8
NC_016048:2734563:275971227597122760680969Oscillibacter valericigenes Sjm18-20, complete genomeputative fructokinase3e-0756.2
NC_008149:3022970:302468530246853025623939Yersinia pestis Nepal516, complete genome1-phosphofructokinase1e-0654.3
NC_008150:1147883:116422411642241165162939Yersinia pestis Antiqua, complete genome1-phosphofructokinase1e-0654.3
NC_005810:1413305:141502014150201415958939Yersinia pestis biovar Microtus str. 91001, complete genome1-phosphofructokinase1e-0654.3
NC_010159:1558000:157423915742391575177939Yersinia pestis Angola, complete genome1-phosphofructokinase1e-0654.3
NC_003143:1441211:145812414581241459062939Yersinia pestis CO92, complete genome1-phosphofructokinase1e-0654.3
NC_010465:3046904:304861930486193049557939Yersinia pseudotuberculosis YPIII, complete genome1-phosphofructokinase1e-0654.3
NC_010634:1565788:158271715827171583655939Yersinia pseudotuberculosis PB1/+, complete genome1-phosphofructokinase1e-0654.3
NC_006155:1567306:158422015842201585158939Yersinia pseudotuberculosis IP 32953, complete genome1-phosphofructokinase1e-0654.3
NC_004088:3186954:318866931886693189607939Yersinia pestis KIM, complete genome1-phosphofructokinase1e-0654.3
NC_009381:2731965:273368027336802734618939Yersinia pestis Pestoides F chromosome, complete genome1-phosphofructokinase1e-0654.3
NC_009708:3035798:303751330375133038451939Yersinia pseudotuberculosis IP 31758 chromosome, complete genome1-phosphofructokinase1e-0654.3
NC_014029:1512605:152951015295101530448939Yersinia pestis Z176003 chromosome, complete genome1-phosphofructokinase1e-0654.3
NC_017154:1454704:147161814716181472556939Yersinia pestis D106004 chromosome, complete genome1-phosphofructokinase1e-0654.3
NC_017160:1299733:130125613012561302194939Yersinia pestis D182038 chromosome, complete genome1-phosphofructokinase1e-0654.3
NC_017168:4363000:438019243801924381130939Yersinia pestis A1122 chromosome, complete genome1-phosphofructokinase1e-0654.3
NC_017265:2807302:280901728090172809955939Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,fructose-1-phosphate kinase1e-0654.3
NC_016935:2302055:232117823211782322110933Paenibacillus mucilaginosus 3016 chromosome, complete genomePfkB domain-containing protein5e-0652