Pre_GI: BLASTN Hits

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Query: NC_021182:4829000 Clostridium pasteurianum BC1, complete genome

Start: 4829000, End: 4859315, Length: 30316

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:29210002921000295537334374Clostridium pasteurianum BC1, complete genome01076BLASTN svgBLASTP svg
NC_021182:37715233771523379409922577Clostridium pasteurianum BC1, complete genome8e-38167BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome2e-35159BLASTN svgBLASTP svg
NC_021182:20135002013500203160018101Clostridium pasteurianum BC1, complete genome8e-35157BLASTN svgBLASTP svg
NC_012563:32881243288124330917721054Clostridium botulinum A2 str. Kyoto, complete genome8e-29137BLASTN svgBLASTP svg
NC_012563:2230403*2230403225235521953Clostridium botulinum A2 str. Kyoto, complete genome5e-27131BLASTN svgBLASTP svg
NC_021182:96683996683998495918121Clostridium pasteurianum BC1, complete genome5e-27131BLASTN svgBLASTP svg
NC_010516:3845942*3845942386860822667Clostridium botulinum B1 str. Okra, complete genome1e-24123BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome3e-22115BLASTN svgBLASTP svg
NC_010516:20640272064027208498120955Clostridium botulinum B1 str. Okra, complete genome3e-22115BLASTN svgBLASTP svg
NC_012563:3580000*3580000360253222533Clostridium botulinum A2 str. Kyoto, complete genome1e-21113BLASTN svgBLASTP svg
NC_021182:1346261*1346261136580919549Clostridium pasteurianum BC1, complete genome1e-21113BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome2e-20109BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome2e-20109BLASTN svgBLASTP svg
NC_014328:85290*8529014387558586Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_014328:1379437*1379437140209922663Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010516:27772052777205280241925215Clostridium botulinum B1 str. Okra, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_021182:10452181045218106369618479Clostridium pasteurianum BC1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014328:34829803482980351005727078Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014328:25889942588994260699318000Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010516:3234791*3234791325832823538Clostridium botulinum B1 str. Okra, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014387:1175927*1175927120709031164Butyrivibrio proteoclasticus B316 chromosome 1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_021182:2219286*2219286224215022865Clostridium pasteurianum BC1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010516:127000*12700015115624157Clostridium botulinum B1 str. Okra, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_012778:841934*84193489007548142Eubacterium eligens ATCC 27750, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010520:28074292807429283431926891Clostridium botulinum A3 str. Loch Maree, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_007955:74283474283476491922086Methanococcoides burtonii DSM 6242, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015589:1899329*1899329192221822890Desulfotomaculum ruminis DSM 2154 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014614:26432032643203266635723155Clostridium sticklandii, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014328:1596016*1596016161409918084Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010520:72531272531274947124160Clostridium botulinum A3 str. Loch Maree, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014328:2518081*2518081254764529565Clostridium ljungdahlii ATCC 49587 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_011898:513835*51383553654722713Clostridium cellulolyticum H10, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008576:1413778*1413778143411220335Magnetococcus sp. MC-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008576:777949*77794980025522307Magnetococcus sp. MC-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010418:70000700009209922100Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete4e-0661.9BLASTN svgBLASTP svg
NC_012563:122000*12200014417822179Clostridium botulinum A2 str. Kyoto, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014152:1430156*1430156145159921444Thermincola sp. JR, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014328:23269302326930235084023911Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007907:37225003722500376273940240Desulfitobacterium hafniense Y51, complete genome4e-0661.9BLASTN svgBLASTP svg