Pre_GI: BLASTN Hits

Some Help

Query: NC_017516:364404 Neisseria meningitidis H44/76 chromosome, complete genome

Start: 364404, End: 386115, Length: 21712

Host Lineage: Neisseria meningitidis; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: The second of two pathogenic Neisseria, this organism causes septicemia and is the leading cause of life-threatening meningitis (inflammation of the meninges, the membrane surrounding the brain and spinal cord) in children. This organism typically residies in the nasopharynx cavity but can invade the respiratory epthelial barrier, cross into the bloodstream and the blood brain barrier, and cause inflammation of the meninges. Pathogenicity factors include the surface proteins (porins and opacity proteins), and the type IV pilus (which is also found in Neisseria gonorrhoeae). This organism, like Neisseria gonorrhoeae, is naturally competent, and protein complexes at the cell surface recognize the uptake signal sequence in extracellular DNA, an 8mer that is found at high frequency in Neisseria chromosomal DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003112:36486936486938516520297Neisseria meningitidis MC58, complete genome022870BLASTN svgBLASTP svg
NC_010120:1814592*1814592183677422183Neisseria meningitidis 053442, complete genome012530BLASTN svgBLASTP svg
NC_003116:2063500*2063500208368920190Neisseria meningitidis Z2491, complete genome09367BLASTN svgBLASTP svg
NC_008767:1829500*1829500185316723668Neisseria meningitidis FAM18, complete genome09337BLASTN svgBLASTP svg
NC_002946:1556000*1556000157831222313Neisseria gonorrhoeae FA 1090, complete genome08661BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome03703BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome03558BLASTN svgBLASTP svg
NC_002946:13428571342857136509922243Neisseria gonorrhoeae FA 1090, complete genome03408BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome03067BLASTN svgBLASTP svg
NC_003112:14235281423528145518831661Neisseria meningitidis MC58, complete genome02000BLASTN svgBLASTP svg
NC_003112:603879*60387962713023252Neisseria meningitidis MC58, complete genome01711BLASTN svgBLASTP svg
NC_008767:549351*54935156839719047Neisseria meningitidis FAM18, complete genome01616BLASTN svgBLASTP svg
NC_008767:1321129*1321129134743826310Neisseria meningitidis FAM18, complete genome01616BLASTN svgBLASTP svg
NC_010120:13135001313500133123817739Neisseria meningitidis 053442, complete genome01443BLASTN svgBLASTP svg
NC_003116:75566675566677455118886Neisseria meningitidis Z2491, complete genome4e-110406BLASTN svgBLASTP svg
NC_010120:662969*66296968275319785Neisseria meningitidis 053442, complete genome3e-49204BLASTN svgBLASTP svg
NC_003112:719490*71949074286423375Neisseria meningitidis MC58, complete genome3e-49204BLASTN svgBLASTP svg
NC_003116:867943*86794389021922277Neisseria meningitidis Z2491, complete genome7e-47196BLASTN svgBLASTP svg
NC_003112:149593*14959317620526613Neisseria meningitidis MC58, complete genome3e-46194BLASTN svgBLASTP svg
NC_010120:2029880*2029880205559925720Neisseria meningitidis 053442, complete genome6e-44186BLASTN svgBLASTP svg
NC_008767:136958*13695816389726940Neisseria meningitidis FAM18, complete genome6e-44186BLASTN svgBLASTP svg
NC_003116:1488576*1488576150859920024Neisseria meningitidis Z2491, complete genome6e-44186BLASTN svgBLASTP svg
NC_014752:15300001530000155313723138Neisseria lactamica ST-640, complete genome3e-43184BLASTN svgBLASTP svg
NC_008767:45198345198348189329911Neisseria meningitidis FAM18, complete genome6e-41176BLASTN svgBLASTP svg
NC_003116:1518110*1518110154147823369Neisseria meningitidis Z2491, complete genome2e-40174BLASTN svgBLASTP svg
NC_003112:96815*9681512483128017Neisseria meningitidis MC58, complete genome4e-36161BLASTN svgBLASTP svg
NC_003116:65887965887968269623818Neisseria meningitidis Z2491, complete genome4e-36161BLASTN svgBLASTP svg
NC_008767:2160000*2160000218237122372Neisseria meningitidis FAM18, complete genome4e-36161BLASTN svgBLASTP svg
NC_008767:84950*8495011280827859Neisseria meningitidis FAM18, complete genome4e-36161BLASTN svgBLASTP svg
NC_003116:17340001734000175259918600Neisseria meningitidis Z2491, complete genome1e-35159BLASTN svgBLASTP svg
NC_002946:618439*61843964067022232Neisseria gonorrhoeae FA 1090, complete genome2e-34155BLASTN svgBLASTP svg
NC_014752:13314471331447135039918953Neisseria lactamica ST-640, complete genome9e-34153BLASTN svgBLASTP svg
NC_010120:45277145277147660723837Neisseria meningitidis 053442, complete genome9e-34153BLASTN svgBLASTP svg
NC_008767:13632881363288138639123104Neisseria meningitidis FAM18, complete genome9e-34153BLASTN svgBLASTP svg
NC_003112:744476*74447676938624911Neisseria meningitidis MC58, complete genome9e-34153BLASTN svgBLASTP svg
NC_008767:92781092781095056622757Neisseria meningitidis FAM18, complete genome1e-26129BLASTN svgBLASTP svg
NC_014752:197000*19700022735630357Neisseria lactamica ST-640, complete genome1e-26129BLASTN svgBLASTP svg
NC_008767:87790487790490209924196Neisseria meningitidis FAM18, complete genome2e-25125BLASTN svgBLASTP svg
NC_003116:291661*29166131692925269Neisseria meningitidis Z2491, complete genome2e-25125BLASTN svgBLASTP svg
NC_010120:144000*14400016559921600Neisseria meningitidis 053442, complete genome8e-25123BLASTN svgBLASTP svg
NC_003112:18241961824196187366149466Neisseria meningitidis MC58, complete genome3e-24121BLASTN svgBLASTP svg
NC_010120:10658331065833109411728285Neisseria meningitidis 053442, complete genome3e-24121BLASTN svgBLASTP svg
NC_003116:1018813*1018813104163622824Neisseria meningitidis Z2491, complete genome1e-23119BLASTN svgBLASTP svg
NC_003112:16853301685330171029124962Neisseria meningitidis MC58, complete genome1e-23119BLASTN svgBLASTP svg
NC_003112:15940001594000161392219923Neisseria meningitidis MC58, complete genome5e-23117BLASTN svgBLASTP svg
NC_003112:2215184*2215184224803032847Neisseria meningitidis MC58, complete genome5e-23117BLASTN svgBLASTP svg
NC_003112:84400084400086636122362Neisseria meningitidis MC58, complete genome5e-23117BLASTN svgBLASTP svg
NC_003116:988000988000101010222103Neisseria meningitidis Z2491, complete genome5e-23117BLASTN svgBLASTP svg
NC_008767:2126854*2126854215711130258Neisseria meningitidis FAM18, complete genome5e-23117BLASTN svgBLASTP svg
NC_010120:78800078800081026622267Neisseria meningitidis 053442, complete genome5e-23117BLASTN svgBLASTP svg
NC_003112:498465*49846553573337269Neisseria meningitidis MC58, complete genome2e-22115BLASTN svgBLASTP svg
NC_008767:20101402010140202919319054Neisseria meningitidis FAM18, complete genome2e-22115BLASTN svgBLASTP svg
NC_008767:27375927375929740423646Neisseria meningitidis FAM18, complete genome2e-22115BLASTN svgBLASTP svg
NC_010120:19994219994222285022909Neisseria meningitidis 053442, complete genome2e-22115BLASTN svgBLASTP svg
NC_014752:131994*13199415436422371Neisseria lactamica ST-640, complete genome2e-22115BLASTN svgBLASTP svg
NC_014752:13916151391615142388832274Neisseria lactamica ST-640, complete genome2e-22115BLASTN svgBLASTP svg
NC_010120:2098000*2098000212739829399Neisseria meningitidis 053442, complete genome8e-22113BLASTN svgBLASTP svg
NC_002946:1786000*1786000181482228823Neisseria gonorrhoeae FA 1090, complete genome8e-22113BLASTN svgBLASTP svg
NC_008767:804655*80465582578721133Neisseria meningitidis FAM18, complete genome3e-21111BLASTN svgBLASTP svg
NC_008767:17393441739344175756118218Neisseria meningitidis FAM18, complete genome1e-20109BLASTN svgBLASTP svg
NC_002946:10201751020175106499344819Neisseria gonorrhoeae FA 1090, complete genome1e-20109BLASTN svgBLASTP svg
NC_003116:93576*9357612141127836Neisseria meningitidis Z2491, complete genome3e-18101BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014323:3669704*3669704369236322660Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014752:98117*9811712709928983Neisseria lactamica ST-640, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014752:23601*236014343619836Neisseria lactamica ST-640, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011080:4177443*4177443420040522963Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0971.9BLASTN svgBLASTP svg
NC_014837:1873020*1873020190870735688Pantoea sp. At-9b chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007510:943068*94306896450321436Burkholderia sp. 383 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_002946:1935186*1935186195867523490Neisseria gonorrhoeae FA 1090, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002946:1902642*1902642192658323942Neisseria gonorrhoeae FA 1090, complete genome3e-0661.9BLASTN svgBLASTP svg